KEGG   Oryzias latipes (Japanese medaka): 101156000
Entry
101156000         CDS       T02443                                 
Symbol
rnf219
Name
(RefSeq) RING finger protein 219
  KO
K24091  ORC ubiquitin ligase 1 [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101156000 (rnf219)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101156000 (rnf219)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101156000 (rnf219)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-P11 zf-rbx1 Cnn_1N zf-RING_UBOX zf-RING_5 DUF2205 Sina_RING TMF_DNA_bd DUF1272 zf-RING_16 ZapB
Other DBs
NCBI-GeneID: 101156000
NCBI-ProteinID: XP_004067210
UniProt: H2LHV2
LinkDB
Position
3:14865369..14871579
AA seq 654 aa
MALNYQASTLSLTLPISCQICLGKVRQPVICANYHVFCSSCMEVWLKKAGQCPTCRVPIT
AESPCREIIGGTNEGDHSDNTSMRKCLRKTRGELLLREYEEEIEGLMRENEELKVKTQNL
ETQLKTALLPTSINAVEADEKRVPHFVVEEWKNKLQAATDVCDQIKQDMDKLKEANKILR
SQNVDLVQENMRLKAEVASRSPQKFGRYTVAALEAKCQLYERDVDHLKRALERSDQYVDE
LESRLRKCENRNPEAHEACGTAADALTQQQRLNMMMRSLSEEERRLICSNPEAESQAFSK
NPSVLFMSGTPKEFKKSLAGEQKKENPESTSSDFSPATPSSAFQSLTLRSPGIREKKVTF
KPISYQKRLDFEELSGTRKMSSALESKFASLEKFPKGSSSNITGSPKSVFWGCWERPHAD
NPSSSDPSTENPVKESPSAVSAGGEVDSFQMACEASMDAAYLDKISELDSMMLDGESSSS
RGSQLSLGSPPPADLDRTLVADSQTCTAVSSSGDTCADGDQKNLDLGDVKDDTKNIIEAP
KSSVEDAFDSQTSSRNGAESVPVSSERGWPSQNEELSFDLLFDATDDIKAGPSGSFSPVN
QHQDLDVAYRLSSSSGGKPVSSRNKHTLNGGQPIKRKSHSPFNTNSPTKLSKLM
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggcgctcaattatcaggcatcgactctgtctctaactttgcccatttcctgtcaaatt
tgcctcggaaaggtcaggcagccggtcatttgtgccaactaccacgtgttctgttcgtcc
tgcatggaagtgtggttaaagaaagccggccagtgtcccacctgcagagtgcccatcaca
gcagagagtccgtgcagagagatcatcggggggacgaatgaaggcgatcacagtgacaac
acatccatgagaaaatgtctccgtaaaaccagaggagagctgcttttacgggagtatgag
gaagagatcgaagggcttatgagagaaaacgaggagctgaaagtcaaaactcaaaatctg
gaaacccagctgaagaccgcattgcttcctaccagcataaatgcagtggaagcagatgaa
aagagggtccctcactttgttgtagaggaatggaagaacaagctgcaagcagccacagat
gtttgtgatcaaataaagcaggacatggacaaactgaaagaggcaaataagatcctgcgt
tctcaaaatgtagaccttgtccaagagaacatgagacttaaagcagaagtggcgagcaga
tctcctcagaagtttggtcgatacacagttgcagcgctggaagccaagtgtcagctgtat
gagcgtgatgtcgaccacttaaaacgggctctggaacgcagtgaccagtacgtcgatgag
ctagagtcccgactcaggaaatgtgaaaataggaatcctgaagcccacgaggcgtgtggg
acggcggcagatgctctcacacagcaacagaggttgaacatgatgatgagaagcttaagt
gaggaagaaagaaggttgatctgcagcaatccagaggcagagtctcaagcgttttccaaa
aatcccagtgttttgttcatgtcaggaactcccaaagagttcaagaagagcctggctgga
gagcagaagaaggaaaaccctgaaagcacctcctctgacttctctcctgcaactccatca
tctgccttccagtctctgaccttgagaagccctggcatccgtgagaagaaagtcacattt
aaacctatatcttatcaaaaaagacttgattttgaagaattgtctggtaccaggaagatg
agttctgccttagagagcaaatttgccagcctcgagaagtttccaaaaggctcatcttca
aatataacagggtctccaaagtcagtcttttggggttgttgggaaagaccccatgctgac
aatccatcgtcttcagacccgagtacagaaaatccagtcaaggaatccccatctgcagtt
tcagcaggtggtgaagttgatagttttcagatggcatgtgaggcttccatggatgcagct
tacctggacaagatctcagagttagactccatgatgcttgatggagagagttccagcagc
cgtggatcacagctctctttaggttccccacctcctgcagacttagacagaactcttgtt
gcagattcacaaacctgcaccgctgtatcgagttccggtgacacatgtgcagatggagat
cagaagaacctggatttaggtgacgttaaagatgacaccaaaaacatcatagaggctccc
aaaagctctgtagaggatgcttttgattctcagacctcaagtagaaatggggcagagagt
gtcccggttagttcagagcgagggtggccctctcagaacgaagaactgtcttttgacttg
ttgtttgacgctactgatgatatcaaggctggaccgtctggctccttcagccccgtaaac
caacaccaagatcttgatgttgcatatcgtctgtcctcttcctctggtgggaagcctgtg
agttcaagaaacaaacacacacttaacggcggtcaaccaataaagagaaagtctcacagt
ccctttaatacaaacagtcctactaaactctcaaagctcatgtga

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