Oryzias latipes (Japanese medaka): 101156000
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Entry
101156000 CDS
T02443
Symbol
rnf219
Name
(RefSeq) RING finger protein 219
KO
K24091
ORC ubiquitin ligase 1 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101156000 (rnf219)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101156000 (rnf219)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101156000 (rnf219)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-P11
zf-rbx1
Cnn_1N
zf-RING_UBOX
zf-RING_5
DUF2205
Sina_RING
TMF_DNA_bd
DUF1272
zf-RING_16
ZapB
Motif
Other DBs
NCBI-GeneID:
101156000
NCBI-ProteinID:
XP_004067210
UniProt:
H2LHV2
LinkDB
All DBs
Position
3:14865369..14871579
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AA seq
654 aa
AA seq
DB search
MALNYQASTLSLTLPISCQICLGKVRQPVICANYHVFCSSCMEVWLKKAGQCPTCRVPIT
AESPCREIIGGTNEGDHSDNTSMRKCLRKTRGELLLREYEEEIEGLMRENEELKVKTQNL
ETQLKTALLPTSINAVEADEKRVPHFVVEEWKNKLQAATDVCDQIKQDMDKLKEANKILR
SQNVDLVQENMRLKAEVASRSPQKFGRYTVAALEAKCQLYERDVDHLKRALERSDQYVDE
LESRLRKCENRNPEAHEACGTAADALTQQQRLNMMMRSLSEEERRLICSNPEAESQAFSK
NPSVLFMSGTPKEFKKSLAGEQKKENPESTSSDFSPATPSSAFQSLTLRSPGIREKKVTF
KPISYQKRLDFEELSGTRKMSSALESKFASLEKFPKGSSSNITGSPKSVFWGCWERPHAD
NPSSSDPSTENPVKESPSAVSAGGEVDSFQMACEASMDAAYLDKISELDSMMLDGESSSS
RGSQLSLGSPPPADLDRTLVADSQTCTAVSSSGDTCADGDQKNLDLGDVKDDTKNIIEAP
KSSVEDAFDSQTSSRNGAESVPVSSERGWPSQNEELSFDLLFDATDDIKAGPSGSFSPVN
QHQDLDVAYRLSSSSGGKPVSSRNKHTLNGGQPIKRKSHSPFNTNSPTKLSKLM
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaattatcaggcatcgactctgtctctaactttgcccatttcctgtcaaatt
tgcctcggaaaggtcaggcagccggtcatttgtgccaactaccacgtgttctgttcgtcc
tgcatggaagtgtggttaaagaaagccggccagtgtcccacctgcagagtgcccatcaca
gcagagagtccgtgcagagagatcatcggggggacgaatgaaggcgatcacagtgacaac
acatccatgagaaaatgtctccgtaaaaccagaggagagctgcttttacgggagtatgag
gaagagatcgaagggcttatgagagaaaacgaggagctgaaagtcaaaactcaaaatctg
gaaacccagctgaagaccgcattgcttcctaccagcataaatgcagtggaagcagatgaa
aagagggtccctcactttgttgtagaggaatggaagaacaagctgcaagcagccacagat
gtttgtgatcaaataaagcaggacatggacaaactgaaagaggcaaataagatcctgcgt
tctcaaaatgtagaccttgtccaagagaacatgagacttaaagcagaagtggcgagcaga
tctcctcagaagtttggtcgatacacagttgcagcgctggaagccaagtgtcagctgtat
gagcgtgatgtcgaccacttaaaacgggctctggaacgcagtgaccagtacgtcgatgag
ctagagtcccgactcaggaaatgtgaaaataggaatcctgaagcccacgaggcgtgtggg
acggcggcagatgctctcacacagcaacagaggttgaacatgatgatgagaagcttaagt
gaggaagaaagaaggttgatctgcagcaatccagaggcagagtctcaagcgttttccaaa
aatcccagtgttttgttcatgtcaggaactcccaaagagttcaagaagagcctggctgga
gagcagaagaaggaaaaccctgaaagcacctcctctgacttctctcctgcaactccatca
tctgccttccagtctctgaccttgagaagccctggcatccgtgagaagaaagtcacattt
aaacctatatcttatcaaaaaagacttgattttgaagaattgtctggtaccaggaagatg
agttctgccttagagagcaaatttgccagcctcgagaagtttccaaaaggctcatcttca
aatataacagggtctccaaagtcagtcttttggggttgttgggaaagaccccatgctgac
aatccatcgtcttcagacccgagtacagaaaatccagtcaaggaatccccatctgcagtt
tcagcaggtggtgaagttgatagttttcagatggcatgtgaggcttccatggatgcagct
tacctggacaagatctcagagttagactccatgatgcttgatggagagagttccagcagc
cgtggatcacagctctctttaggttccccacctcctgcagacttagacagaactcttgtt
gcagattcacaaacctgcaccgctgtatcgagttccggtgacacatgtgcagatggagat
cagaagaacctggatttaggtgacgttaaagatgacaccaaaaacatcatagaggctccc
aaaagctctgtagaggatgcttttgattctcagacctcaagtagaaatggggcagagagt
gtcccggttagttcagagcgagggtggccctctcagaacgaagaactgtcttttgacttg
ttgtttgacgctactgatgatatcaaggctggaccgtctggctccttcagccccgtaaac
caacaccaagatcttgatgttgcatatcgtctgtcctcttcctctggtgggaagcctgtg
agttcaagaaacaaacacacacttaacggcggtcaaccaataaagagaaagtctcacagt
ccctttaatacaaacagtcctactaaactctcaaagctcatgtga
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