Oryzias latipes (Japanese medaka): 101156011
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Entry
101156011 CDS
T02443
Symbol
prdm16
Name
(RefSeq) PR domain zinc finger protein 16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00310
Lysine degradation
ola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101156011 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101156011 (prdm16)
03036 Chromosome and associated proteins [BR:
ola03036
]
101156011 (prdm16)
Enzymes [BR:
ola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
101156011 (prdm16)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101156011 (prdm16)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101156011 (prdm16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_11
zf-C2H2_jaz
zf-H2C2_5
SET
zf-BED
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
101156011
NCBI-ProteinID:
XP_023812257
LinkDB
All DBs
Position
7:complement(8185273..8353735)
Genome browser
AA seq
1411 aa
AA seq
DB search
MRSKARARKLAKNDSEPVDSVYDTEADLPGLAAGSRGVDSPEDDAEDGIINMSHLPSPTP
SRPNNNHHHLLHPHIYTSHHLHNNSSSSNDQDFTTPKEGSPYEAPVYIPDDIPIPNELEL
RESSVPGAGLGVWAKTRICAGERFGLNGTKHREASGKDDSFGWEQMMNDHEDDSTDNCIK
KVVDDMGNIKFELDTGLDTTANSWLKYVRSAPSFEEQNLVASHLTGDQIYYKAVRDIEAG
EELLVYMKDGIFPEGSMAPNLQDEQMYRCEDCDELFSSTLELRRHQKYSCSSAGSIFDAL
RDDFKQEREDSDEPVHECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKSNLI
RHQMSHDSGKRFECENCDKVQHTQHVFTDPSNLQRHIRSQHVGARAHTCPECGKTFATSS
GLKQHKHIHSSVKPFICPDGLRVFAPPGEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDC
GQLFSTTSSLNKHRRFCEGKNHYGSPAGMFNPGIPMSSSPIMAKTKSHHPHLTGLNQSSL
GFTDYFPSRPHPHSGLPFSPGPHGFPSLPHGFPGIFPPSLYPRPTLLPASPLIKSPLGAS
SQEVKLPRSPIGAPPLPLVSSTNSNGVSSLGLEDKDKEIKLELSSSGEVKPKSKITDISD
GSDLEDVNTTSGTDLDTTTGTASGDGSDLESEGESERERSGKRRKPSGTASSQDTNQFED
TNNVLTSNMSGSGNLSIDRPFLGSGSSQHSFFPPPDEQAIPPTSTNTNAATTDSIKAIAS
IAEKYFGPGLIGLHQEKKMGPLPYHSMFPFQFLPNFHNSLYPFSTDRNALNPSMFFKPEP
KSPRELLHKTISGPPAAPASTAESPFDLTTKTKEAKLIPPTPANPSNPNSSTGSSSGPVS
ISNSEEQPLDLSIGSRNRSSHNGLHAELQSRKNHMYGPGKSVFNKEETPSGFPHPLSQSL
HQSSLTQHQQSQPHQPPPLHYAKPSAFFMDPIYSRVEKRKLLDPVGAVKEKFLRPSPPLF
HPQMSAMENMTEKLESFGALKLDAPPNSLQHSAHPLFNFRSPPPSLSDAILRKGKERYAC
RYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLC
NRCFGQQTNLDRHLKKHEHENIPVSQQSGILSNLGTTISSPNSEPDNHALLDEKEDSYFS
EIRNFISNSEMNQASSSTDKRSDQPEEECPPTHSLSNSKLGLRGLDEEEEEVDGDDEEEE
EGSLTEKSHDEAPESPSPVTTGVYEEDDEEDDGESAPLAMNYEHTRRCVEEEGSLLDLES
LPTFPKSVDGLRKAATEEQPFDVKDIFNTSLESEALKETLYRQAKTQAYAMMLSLSENNP
LHAPSQSSLDAWLSMGGGPSETSSFHPLNHI
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgacagtgagcctgtggacagc
gtgtacgacacagaggcagacctcccaggcttagcagctggcagcagaggtgtcgacagc
ccagaagacgacgcagaagacggcatcatcaacatgtcccatttaccgtcaccgactcct
tcccgcccgaacaacaaccatcaccacctgctgcaccctcatatctacacctcccaccac
ctgcacaacaacagcagcagcagcaatgaccaggacttcaccacacccaaggagggctca
ccgtatgaggcacctgtctacattcctgatgacattcctattcccaatgaactggagctt
cgggaatcctctgtgcccggagcaggccttggcgtatgggccaaaactcgcatttgtgct
ggggaaaggtttggtctgaacggcacgaagcaccgcgaagcctcaggcaaagacgactcc
tttggatgggagcagatgatgaatgaccatgaggatgactccactgacaactgcatcaaa
aaagttgtggacgacatgggcaacatcaagtttgaactggacacggggctggacaccacc
gccaacagctggctcaaatacgtccggtctgccccatcgtttgaggagcagaaccttgtt
gccagccatctcacaggagaccagatttattataaagccgtccgggacattgaagcaggg
gaggagcttttggtgtatatgaaggacggcattttcccggagggctccatggcacccaac
ctacaagatgagcaaatgtaccgctgtgaagactgtgatgagctcttctcctcaacactt
gagctgcggcggcatcagaagtactcgtgctccagtgcaggctccatctttgatgcactg
agagacgacttcaagcaggaacgcgaggacagcgacgagcctgtccacgagtgcaaagac
tgtgagaagatcttcccaaacgagtacagtttggggcaacacatgatcgtccacacagaa
gagagggagtacaagtgcgaccaatgtccaaaagccttcaactggaaatccaacctcatt
cggcaccaaatgtcacatgacagtggcaagcgctttgagtgtgaaaactgtgataaggta
cagcacacccagcacgttttcacagatcccagcaacctccagcgccatatccgctcccag
catgtgggggcccgcgctcacacatgtccagaatgtggcaaaacttttgccacctcatca
ggcctgaagcagcataagcacatccacagcagtgtaaaaccctttatctgccctgatggg
ctgcgtgtttttgctcccccaggtgaggtgtgccacaaatcctacacgcagttctccaac
ctctgccgccacaagcgtatgcacgctgattgccgtacccagatcaagtgtaaagactgt
gggcaattgtttagcactacctcctctctcaacaagcaccggcgcttttgtgagggcaaa
aaccattatggttctccggcagggatgtttaaccccggcattcccatgagctctagcccc
atcatggctaaaaccaagtcccatcatccccaccttacaggtttgaaccagtcaagttta
ggctttaccgactactttccatcaagacctcatcctcatagtggcttgcccttctccccg
ggaccccatggcttcccatcactcccacatggctttccaggtatcttccccccatcactg
tatccacggccaactttattacctgcaagtccattaataaagagtccgctgggcgccagc
agtcaagaggtgaaacttcctcgaagtcccataggtgcccctcctctaccacttgtcagt
tccacaaacagcaatggagtcagcagtttggggctggaagacaaggacaaggaaatcaaa
cttgaattatcttctagtggagaggtaaagcctaaatccaagattacagacatttctgat
ggcagtgaccttgaagatgttaataccacaagtgggacagatttggacaccaccacgggt
actgcttcaggtgatggttctgacctggagagtgaaggagaaagtgaacgtgaacgaagt
ggtaaaaggagaaagccatctggcacagcgtcaagtcaagacacaaaccagttcgaggac
acaaacaacgtattaacgtcaaacatgtctggttcagggaacctgtccattgatcgccct
tttcttggatccggatcatctcagcactcctttttccctccaccggatgagcaagccatc
cctcccacctccacaaataccaatgcagccacaactgattccatcaaagccattgcctct
attgctgaaaaatattttggccctggtttgatcggacttcatcaagagaagaagatgggt
ccattgccctaccattccatgtttcccttccagtttttgccaaactttcacaactctctt
tatcccttcagcactgatcgcaatgctcttaatccaagtatgttctttaagcctgagccc
aaatcacctcgtgaactgctacacaaaactatttcaggtccccctgcggcccctgcttct
actgcggagtcaccatttgacctcaccacaaaaaccaaggaggccaagttgattcctcca
accccagcaaatccctccaaccccaacagcagcactggaagcagtagtggacctgtatca
atatccaacagtgaagaacagccgctggacctcagtattggcagcagaaaccgcagcagt
cataacggtttgcatgctgagctgcaaagtcgaaagaatcacatgtatggacctggaaaa
agcgtttttaataaggaagaaactccatctggttttccacaccctctttcacagtcgtta
catcaatcctctttaacacagcatcagcagtcacagccgcatcaaccaccccccctgcac
tatgccaagccctcagctttcttcatggaccctatctacagcagggtggagaagaggaag
ctacttgacccagtcggagctgtgaaggagaaattcttgagaccctcgccacctctcttc
catccacagatgtcagccatggaaaatatgacagagaaactcgaaagctttggggcttta
aaactggacgctccgcccaattcactgcaacattcagctcatccactcttcaacttccgc
tctccacctccctccctctcagacgccatccttcgcaaaggcaaggaacgttacgcctgc
aggtactgtggaaaaatcttcccacgttcagcaaaccttaccagacacttgcggacacat
acgggagaacaaccctacaggtgtaaatactgtgaccgctcattcagcatctcatccaat
cttcaacggcacgtccgcaatatccacaacaaggagaagcccttcaaatgtcacctgtgc
aaccgctgcttcggtcagcaaaccaaccttgaccgccatctgaagaagcatgagcatgaa
aacattcctgtgagccagcagtctgggatactttccaacctgggaaccaccatctcttct
ccaaactccgagccagacaatcatgcacttttagatgagaaggaagactcgtacttctca
gaaatccgcaacttcatttccaacagtgagatgaaccaggcctccagctccacggataag
aggtcagaccaacctgaagaggagtgcccacccacccacagtctgtccaactccaagctg
gggctccgggggctagatgaagaagaagaagaggtggatggtgatgacgaggaggaggaa
gaaggcagcctgacagagaagtctcacgatgaggcgccagagtctccatctcctgtcacg
acaggagtatatgaggaggacgatgaagaggacgacggcgagtcggctccgttagctatg
aattatgaacacactcgcaggtgtgtggaggaggagggctctctcttggacctggaaagt
ctgcccacctttcccaagagtgtggatggtttacgtaaagcagccactgaagagcagccc
tttgatgttaaagacatatttaacacatcactagaatctgaagcattgaaagagacactg
tacaggcaggctaaaacccaggcttatgcaatgatgctgtctctctcagagaacaaccct
ttgcacgcgccctcccagagctctctggacgcttggctgagcatggggggtggaccgtcg
gagacgagcagctttcacccactcaatcacatctag
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