Oryzias latipes (Japanese medaka): 101156043
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Entry
101156043 CDS
T02443
Symbol
snap47
Name
(RefSeq) synaptosomal-associated protein 47
KO
K18212
synaptosomal-associated protein 47
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101156043 (snap47)
Membrane trafficking [BR:
ola04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-47
101156043 (snap47)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
101156043
NCBI-ProteinID:
XP_020566824
UniProt:
H2MTC4
LinkDB
All DBs
Position
17:complement(28041359..28048058)
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AA seq
423 aa
AA seq
DB search
MSRDFPIHNWPGSYYINSEKRWETGTLSLTRTTVRFVSSQNGENLASFRLSRITEIKMES
SSFIFSTLTVLEEGNTKHWFGSLQPNRVVVYNVLVHFWRERLLSPGSESQGAEPHPTKGR
ELISLMAGAQRRLEDTGQVLSHQGEQFDSMMQGLEKIDSDLGVADKLLSQLEVPSWWPFG
KLPWKAAQEAKAEDAARAAAVASSSGTSTKNKVIASIPAVVSRGGDSDFKPGCLLVLVSS
MEVRDTNCHLLHRYERNEVDEIKVYSPYEITVRQRFIGKPDICHRFLSAKMPEAMSVLEM
QYKKKVEFTKEYTSFKATPLSSPCDKEGTSLNDVFLQRCQETEVPVEVPAGELSQLQVHV
LQPSVSQAEAQELKQMLLQLKNLALEAESELERQDEVLDVLTSSTDRAAMQIGKHTSRMR
RLL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgagatttccccatccacaactggcctggctcctactacatcaacagtgagaag
aggtgggagaccggcaccctgtccctcaccagaaccacggtgcgcttcgtctccagccag
aacggggagaatctggctagtttccgtctgtcccggatcacggaaatcaagatggaatct
tccagcttcatcttcagcacccttacagtgctggaggaaggcaacaccaagcactggttt
ggttccctacagcccaacagggttgtagtctataacgtgttggtgcatttctggagggag
cgcctgctgtcgcctggctctgagagccaaggggctgaaccccatcccactaaaggcaga
gagctcatcagtctgatggccggggctcaaagaagactggaggacacgggtcaagtcctc
agccatcagggagagcagtttgacagcatgatgcaggggctggagaagattgactcggac
ttaggagtggctgataaactcctctcacaactcgaggtgccctcgtggtggcctttcgga
aagcttccctggaaggccgcacaggaggccaaggctgaagatgctgcaagagcagcagct
gtggcgtcctcaagcgggacgtcgaccaagaacaaggtgatcgcgagcatcccggcagtg
gtgtccagaggcggagattcggacttcaaacctggatgtttgctggtgctggtgtcctcc
atggaggtacgggacaccaactgccacctccttcaccgatatgaacggaacgaagttgat
gaaatcaaggtgtacagtccatatgagattactgttcgacaacggttcatcggaaaacca
gatatatgtcaccggttcctttctgctaaaatgccagaagcaatgtccgtgttggagatg
cagtacaagaaaaaggttgaattcacaaaagaatacacatcattcaaagcaactcctctg
tcatctccatgcgataaagaagggacaagcttgaatgacgtttttctgcagaggtgccaa
gagactgaggtcccagtggaggtcccagcaggagagctgtcccaattgcaggtgcatgtt
ctccagccatctgtgagtcaggctgaggcccaagaactcaagcagatgctgctgcaactg
aagaacctcgcgctggaagccgagtcggagctggagcgacaggatgaagtcctggacgtt
ctgaccagctcaacagaccgagccgccatgcagatcgggaaacacacgagtcgtatgagg
aggctgctgtag
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