Oryzias latipes (Japanese medaka): 101156117
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Entry
101156117 CDS
T02443
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
ola
Oryzias latipes (Japanese medaka)
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GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
101156117
NCBI-ProteinID:
XP_011484047
UniProt:
A0A3B3HBB6
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Position
16:27348457..27518763
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AA seq
1085 aa
AA seq
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MRQKPGSPPIILPAFVALALVTVLPQLSSGVMPFPQDLEPIHTVGREASYLYPSFRGLMS
DNNTARLGLDFQRMLRINHMLYIAARDHVFAINLASSSEQIIPQQKLTWKTKDVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMLTLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINHRPAVLGVFSTQANSITGSAVCAFYMDDIEKAFNGKFKEQRNS
ESAWTPVPEEQVPKPRPGSCAGEGSAAAYKTSTAFPDETLTFIKSYPLMDESIPSVNDKP
FFTRTTSRFKLTQIAVDTSAGPYKNHTVVFLGSDNGHVLKILASTEGANASFSTQLLEDI
DVYNPNKCNIHGENRRVLGLELDRDHHALFVAFSSCVIRVPLSRCSEYGNCKKSCLSSRD
PYCVWLKSGSCVTVSPGFRGAFEQDVENGYDLHPDVCHDLLATTRRENTALDSAFGKTTP
TSASTTHQGAAFPKEAGDSERGTGPDRPPPVGEQGSPDSEPISVEMEGVRRPPELERANH
SVHYTLLIACVLVAFVLGAVVSGFLVSCYCNYTGHKTKKLPKDPEAPIPHALSLRSLAKL
NGLLDSQSKEDKLEVSSPKIYNSFFTNSKEHHPQRRNGHHGMTMGDLVHPHHHHVHHSSE
LSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHISSRPSSSLLHQQVFPYSHG
LSNGQPVAGLLHPEERKIHNSERVLSQPYPGYPQNVMEVTSLDELLKHIHEASGSKHAQL
MSPSGLMASTGGGQLAFANRVQPQIPETESAPYYSSSTLPRDSLTRRMDVPPDIPQHHQS
TLERRHSSQRHSLIAAATKMPSVGAVGGAGGMIPRQHSFSQRNGGPHQPPILARMNSTGS
TCEVHYPLIPSGYLQRQHSYNGEQQEVQHRGAIIRRASSLKPDVPPKPLFIPATSPVNEQ
GKYNY
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagaagcctggatcgcccccaataatcctgccggctttcgtggccctcgccttg
gtcaccgttttacctcagctgtcctcaggagtcatgcctttcccccaagacctggaaccc
atccacaccgtgggcagagaagcctcgtacctgtatcccagcttccggggtctcatgtcg
gacaacaacacggctcgcctgggcctggacttccagaggatgctgaggatcaaccacatg
ctgtacatcgctgctcgggatcacgtgttcgcaatcaatctggcttcttcatcggagcag
ataatcccacagcagaaactcacttggaagacaaaggatgtggagaagtgcacagtgagg
ggcaaaaacagcgatgaatgttacaactacatcaaagtgttggtgccgcgcaacgacgag
acgctgttcgcctgcggcacaaacgccttcaaccccacctgccgcaactataagatgttg
acgcttgagcaggaaggggaggaggtggtgggacaagctcgatgcccctttgagtcccgt
cagtccaacgtgggtctctttgcaggtggtgatttttattcggccaccatgactgacttc
ttggccagtgatgcagtcatttacaggagtctgggagaaagcagtcctgttttacgtact
gtcaagtacgactccaaatggttgcgagagcctcatttcctgcatgccattgagtacggg
aactacgtgtactttttcttcagtgagattgcagtggagtacacgactcttggcaaggtg
gttttctcccgggtcgcgcgggtttgcaagaacgacaacgggggttccccgcgggtgctg
gagcgatactggacgtcgttcctcaaagcccggctcaactgctcggttcccggggactcc
ttcttctacttcgatgttctgcagtcgctgaccaacgtgctgcagatcaaccaccggccg
gctgtgcttggagtcttctccacgcaggccaacagcatcactggctctgcagtctgtgct
ttctacatggatgacatagagaaggccttcaacggcaaattcaaagagcagaggaacagc
gagtcggcatggacgccggttccagaggaacaggtcccaaaaccaaggcccggcagctgt
gcgggcgaaggctccgccgccgcctacaagacgtccaccgcttttcccgacgagactctg
acttttatcaagtcatatcctctgatggacgagtccataccatccgtcaacgacaaaccc
ttcttcacccgcactaccagcaggttcaagctgacccagatagcagtggatacttccgcc
gggccctacaagaaccacacggtggtattcctgggttcagataacggccatgtgctgaag
atcctggccagcacagagggagccaacgcctccttcagtacccaactactggaggacatc
gacgtctacaaccctaacaaatgcaacattcacggagagaacaggagggttctgggtctc
gagctggaccgggatcatcacgcgctgtttgtggcgttctccagctgcgtgatccgtgtt
cctctcagtcgctgctcggagtacggaaactgcaaaaaaagctgtttgtcttctcgggat
ccgtactgcgtttggctcaagtcaggcagctgtgtcaccgtttcacctggtttcagagga
gcatttgagcaggatgtggagaacgggtacgatctgcatccagatgtctgtcacgatctc
ctggcaaccactcgcagggaaaacacagcactggattcagcgtttggaaagaccacaccc
acaagcgccagcacaacccatcagggggccgcgttcccaaaggaggcaggtgactctgaa
agaggtacaggtcctgatcgccctccccctgtgggggaacaagggtcacctgactcagag
ccaatcagtgtggagatggagggtgtgagacgacctccagagctggagcgggccaaccac
agtgtccattacaccctcctgattgcttgtgttttggtggcctttgtcctcggggctgtc
gtatctggctttttggtttcatgctattgtaactacacgggccacaagaccaagaagttg
ccaaaagatcctgaagctccaatcccacatgctctgtcactccgcagtttggccaagctt
aatggcctcttagacagccagagcaaggaagacaagctggaagtatcatctccaaagatc
tacaactctttttttaccaacagcaaggagcaccacccacaaaggagaaatgggcatcat
ggaatgacgatgggggacctggtccacccccaccatcaccacgtgcaccactcttcagag
ctttctggtttgccaacgccagactcaactccagagttacccattaaaagcatgaaagcc
tttaaaaaccagtgggaaaagaaccagaactgcaacaacgccaaagagccaaagtcacac
attagctctagaccaagttcaagccttctccaccaacaggtcttcccctactcacatggt
ctgtcaaatggacagccagtagccggtcttctacatccagaggagcgcaaaatccacaat
tcagagcgcgtcttatctcaaccttaccctggttaccctcagaatgtgatggaagtgact
tctctggatgagctcctaaaacacatccatgaagcaagcggtagcaagcacgcccagttg
atgagtccatcgggactgatggccagcactggtggaggacagctggctttcgccaacaga
gttcaacctcagattccagagacagaatcggctccctactacagctcctccacgttaccc
cgggacagtctgacccgtcgcatggatgttcctcctgacatcccccaacaccatcagtct
accctggagaggaggcactcttcccagcggcactcactgattgccgcagccactaaaatg
cccagtgtaggcgcagtaggaggggcaggaggaatgatcccccgccagcacagtttcagc
caacgaaatggtggcccccatcagcccccaattttggctagaatgaactcaacaggcagc
acttgtgaggttcactatcctctcatccccagtgggtacctacaacgtcaacacagctac
aatggagagcaacaggaagtccaacacaggggggccattatccgccgagcgtcatctctc
aagcctgatgtccctcctaagcctttgttcatacctgccacatccccagtcaatgaacaa
ggaaagtacaactactga
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