Oryzias latipes (Japanese medaka): 101156121
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Entry
101156121 CDS
T02443
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04510
Focal adhesion
ola04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101156121 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101156121 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
101156121 (tnn)
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101156121 (tnn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
EGF_Teneurin
EGF_2
Ig_DSCAM-DSCAML_C
EGF_Tenascin
Fn3_Dep-1_4th
Interfer-bind
NDNF
DUF4998
DUF4249
Arylsulfotran_N
EGF
DUF3381
DUF460
Motif
Other DBs
NCBI-GeneID:
101156121
NCBI-ProteinID:
XP_004079293
UniProt:
H2MNN5
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Position
17:24430463..24465929
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AA seq
834 aa
AA seq
DB search
MTTGLLQRASCLLVLLCIVSHCVSLTDNQPSPSTAEQGLTFSHVYKIDIPGSSVDTLECL
QPKDEAGLQTDVTKNGENEILFKHNIRLQTPKCDCEESESFKSLLYRVNGLEEEVQYLKL
QCVQGCCKTAGVDTSCSGHGTYQQESCSCVCTPGWEGPDCSVSSCPDECNDNGRCVDGKC
ECYEGYSGKDCSLLTCPNNCNDKGQCVDGKCVCFSHFTGEDCSTPTCPDNCNGNGRCVNG
QCVCDEGLYGEDCSSVLSPQGLRLVQQTDVSLLVEWESVRGAEYYVLKYYPKYDEGSMKQ
IQIPNTKNSYLITDLTPGVTYIVEVYAVIKQIQSEAEMIEATTDVSTIDDIRVLGQTEIS
ILVDWKNPRAEVDYFRLKHTHPSGQEEEQSVQRSQEARTKHTIVGLYPGTEYQISVQAIK
GNNEGKPSIAAGATDIDAPTNLITTDVTEDTAMVSWDQVQAPIEGYMLSYTSSEGSSADI
PVGRDSSSYKLLGLKPGVRHTVYIWAYRGDKVSEKASTEAETEIDSPKDLRASDVTLETA
TLTWTPPLADIDGYILTYRDEGLMETVEKQIRGSGSSFFASNLKSGKKYIVTIIAYKGNK
RSKVAETIFKTVGVLYPFPMDCVQTMKNGNKKSGIYSIYINNDRDKPIEVYCDMDTDGGG
WLVLQRRNSGRLDFMKRWKQYIAGFGNMTDEFWLGNEKIYELTNTPTQYELRFDLGLGSE
RAYAVYDSFKIGTVKQKYKLAIGKYKGTAGDAMTYHQDRAWTTVDSDNDIALGNCALTHR
GAWWYKNCHLANLNGRWDDTRHSMGVNWKPWKGFETSLDFTEMKIRPAGAMSSS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaccactggacttctacagagggcctcgtgtctgctggtcctactatgcatcgtgtca
cattgtgtgagcctcacggacaaccagcccagtccctcaaccgcagagcagggattgacc
ttcagccacgtctataagattgacatcccagggagctctgttgacacactagaatgtctg
caacccaaggacgaagcaggtctgcaaacagacgtcacaaaaaacggagaaaatgaaatc
ctctttaaacacaacatccgtttgcaaacaccaaagtgtgactgtgaggagtcagaaagt
ttcaagtctctcctgtacagagttaatggactggaagaagaagtccaatacctaaagctc
cagtgcgtccagggatgttgtaaaacagcaggtgtggacacaagttgtagtggccatggc
acttaccaacaggaatcctgcagctgcgtctgtaccccgggatgggaaggccctgattgc
tccgtttcttcctgccccgacgagtgtaacgacaatggccggtgcgttgatgggaaatgc
gagtgctatgaggggtacagtggcaaggactgcagcctgctgacgtgcccgaacaattgc
aacgataagggacagtgcgtggatggaaaatgtgtgtgcttctcacattttactggcgag
gactgcagtaccccaacatgccctgataactgcaatggcaacggacgctgtgtgaatggc
cagtgcgtctgtgatgaaggcctttatggagaggactgttcctcagtcctatcacctcag
ggtctgcggttggtccagcagactgacgtctcgctcctggttgaatgggaatctgttcga
ggggctgagtactatgtgttgaaatattatccaaaatatgatgagggttcaatgaagcag
attcagattcccaacacaaagaattcctacctcatcacagatctgactccaggagtaacc
tacattgttgaagtgtacgctgtcatcaaacagatccaaagtgaagcagagatgattgaa
gccaccacagatgtctctaccattgatgatatccgagtccttggccagacggagatctct
atcctggtggactggaagaatccacgggctgaagtggattattttaggctgaaacacacg
catccatcagggcaggaagaggagcagagtgtgcagaggagtcaagaggcacgcaccaaa
cacactattgtgggtttgtatccaggaacagagtaccaaatctctgtacaggccatcaaa
ggaaacaatgagggaaaaccttccattgcagcaggagccacagatattgatgctccaaca
aacctcatcaccactgacgtcacagaagatactgcaatggtctcctgggatcaggtccaa
gctccgatagagggctatatgctgagctacacctcttctgaaggcagcagtgcagacatc
cctgtaggccgtgatagcagttcatacaagctacttggcctgaagcctggcgttcgccac
actgtatacatctgggcctacagaggagacaaggtcagcgagaaagcttcaacagaagca
gaaacagagattgattctccaaaggacctgagggcgtctgacgttactttggaaactgct
actttgacttggactcctcctctggcagacattgatggttacatccttacctacagagat
gagggtctgatggagactgttgaaaagcagataagaggtagcgggagcagcttttttgct
tctaacttgaagtcaggaaagaaatacattgtgaccatcattgcatataaaggcaacaag
agaagcaaagttgcggagaccatcttcaaaacagttggtgttctgtaccctttcccaatg
gactgtgttcagaccatgaagaatgggaataagaagagtggcatctatagtatttacatc
aacaatgaccgggataaaccaatagaggtttactgtgacatggacacagatggaggcggt
tggctggtgcttcagagacgtaacagtggcaggctggacttcatgaaacgctggaagcag
tacattgcaggctttggcaacatgactgatgaattctggcttggaaatgagaagatatat
gaacttaccaacactccaactcagtatgagctgaggtttgacttgggcctgggttcagag
agagcttatgctgtctatgacagctttaagattgggacggtgaagcagaagtacaaactt
gctattggcaaatacaaaggaacggcaggtgatgcaatgacctatcatcaggaccgggcg
tggacaactgtggattcagataatgatatagctttgggtaactgtgccctgacccaccgt
ggtgcctggtggtacaaaaactgtcacctggctaatctcaatggaagatgggatgacacc
aggcacagcatgggagtgaattggaaaccgtggaagggcttcgaaacgtccctcgacttc
acagagatgaagatccgacctgcaggagccatgtccagcagctag
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