Oryzias latipes (Japanese medaka): 101156223
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Entry
101156223 CDS
T02443
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X6
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04148
Efferocytosis
ola04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101156223
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101156223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ola04090
]
101156223
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
101156223
04091 Lectins [BR:
ola04091
]
101156223
CD molecules [BR:
ola04090
]
Proteins
101156223
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
101156223
Lectins [BR:
ola04091
]
I-type lectins (Siglecs)
101156223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
Zwei_Ig_N
PspB
Motif
Other DBs
NCBI-GeneID:
101156223
NCBI-ProteinID:
XP_004065679
LinkDB
All DBs
Position
1:complement(4512832..4536119)
Genome browser
AA seq
635 aa
AA seq
DB search
MGLLLLLASTLLCGCIQSGIVANEDTSFKISSVTLTIEPAEEVPRNTNVTLRCQTKVLTS
GNLALTRKYTIFKENRIVHTKMTESSDDVLYLLPEARVSNNGKYVCQLTIEGETLSSQPK
KLKVMGLSKPTLHLNRTYLTEGDMVTATCLAPGETGVFGFYFYDDSVELGDVQTDSNRAQ
STLHFTTLGLHRLHCFYTVDNMPVDVKSEESNEVIVTVRGLSIKPVLEISPENNVYEGDP
LNISCRVETSGLNSENIEVYLSQDGNSRWLSMGKTNTKHRMTATGPQLTFECMMTMEHLK
KSERRNVTVIELFSAPVLTMSPAEVFEDEPMTLTCRSEKVASEKLNRAELSYYLSSNQSF
ASNGSGVFKVKALKTDHTCIAQARGIRKTSKALKVHPKVAVSVPKISLQNKPILEQPFHV
LCQSAVGSFPITYILYSNATKLKETVVHLPNQTALFTVVIYNAKELGSYKCEARNGGKRM
QSEELVISAIVPLSRPTLTVLPDLSDISEGDQLNLICAVNGTPPVTFRWYREGDKHPLRI
TTSAETFKDYEVAVVSKQHSGLYYCEAENRASIMVRSNPVDIDVRMALWKKAMIGGIVFL
FILLVVTAGCVLHYKSKRGKRERAPELSVRSGVLW
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgctgctgctcgcctccacgctcctgtgcggctgtatccagtctgggatt
gtggcgaacgaagatacatcgttcaagatctcgtctgtcaccctgaccatcgagcccgca
gaagaggtgcctcggaacaccaacgtgactttgaggtgccagaccaaggtcctgacctcg
ggtaacttggctttaactcgaaaatacaccatcttcaaagaaaacagaatagtccacacc
aagatgaccgagtcctctgatgacgtcctgtacctgctgcccgaggctagagtttccaac
aacggcaaatacgtgtgccagttaaccatcgagggtgaaaccttgagcagccaaccgaaa
aagctcaaagtgatgggtctgtcgaagccgactctccaccttaataggacttacctcacg
gagggggatatggtaacggccacgtgtttggcacctggagagaccggtgtcttcgggttc
tacttctatgatgactctgtggaactcggtgatgttcagactgactccaatcgtgcacag
tccacactgcacttcactactttgggtctccacagacttcactgtttctacaccgtcgat
aacatgccagtcgacgtcaaatccgaggaaagcaacgaggtcatcgtcacagtcagaggg
ctttccatcaaaccagttctggagatttccccagagaacaacgtctatgaaggagatcct
ctgaacatatcgtgcagagtcgaaacctcagggctcaactctgaaaatattgaggtctac
ctgagccaggacggcaactcccgatggctaagcatggggaagacgaacaccaaacacagg
atgacggcaacaggcccgcagctcacctttgagtgcatgatgactatggagcatttgaaa
aaaagtgaaagaaggaatgtgaccgtgattgagctgttctccgcgcccgtcctgacaatg
tccccggctgaagtctttgaagacgagcccatgacgctgacctgcagaagtgaaaaagtc
gcctcggaaaagctgaacagagcagagctgagctactacctttcttcaaaccaaagcttc
gcctccaatggaagtggggtgtttaaagtcaaggccctgaaaacagaccacacatgtatc
gctcaagcaaggggcatcaggaaaaccagtaaagccctcaaagttcatcctaaagttgca
gtttcagttccaaaaatctcactccagaacaagccgatcctggagcagccctttcacgtc
ctctgtcagtcggctgtggggagtttccccatcacctacatcctttacagtaacgccaca
aaactgaaggaaaccgtcgtccatctgcccaatcagacggctctgttcacagtcgtcatc
tacaacgccaaagaactgggaagctacaaatgtgaggcacgaaacggtggaaagaggatg
cagagcgaggaactggtgataagcgccatagtgcctttgagcagaccgactctgactgtc
ctccctgacctgtcagacatctcagagggagaccagctcaacctcatctgcgcggtgaac
ggcactcctcccgtcaccttcaggtggtaccgtgagggggacaaacatcccctccgcatc
accacctctgcagagacgttcaaggattacgaagtcgccgtggtttccaagcagcacagc
ggcttgtactactgcgaggcggagaaccgggccagcatcatggtcagaagcaacccggtt
gacatagatgtccgcatggcgctgtggaagaaagccatgattggggggatcgtgttcttg
ttcatcctgctggtggtgacggccggctgtgtgctgcactacaaatccaagagaggcaaa
cgagaaagagctcctgagttgtcagtacgcagcggcgttctttggtga
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