Oryzias latipes (Japanese medaka): 101156227
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Entry
101156227 CDS
T02443
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03018
RNA degradation
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101156227 (lsm6)
09123 Folding, sorting and degradation
03018 RNA degradation
101156227 (lsm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101156227 (lsm6)
03041 Spliceosome [BR:
ola03041
]
101156227 (lsm6)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101156227 (lsm6)
mRNA degradation factors
5'-3' decay
Lsm complex
101156227 (lsm6)
Spliceosome [BR:
ola03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101156227 (lsm6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
101156227
NCBI-ProteinID:
XP_023813386
UniProt:
A0A3B3I542
LinkDB
All DBs
Position
1:18490598..18494677
Genome browser
AA seq
80 aa
AA seq
DB search
MSMRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAIEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKV
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgagaaaacaaacgccgagtgacttccttaagcagataattggtagaccagtg
gtggtcaaactaaactctggtgtggattacagaggtgttctggcctgtctggatggttac
atgaacatcgccattgaacagacagaagagtatgttaatggacagctcaagaacaagtat
ggggatgcctttctgagaggaaacaatgttctgtacatcagcacccagaagaggaaggtg
tga
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integrated database retrieval system
