Oryzias latipes (Japanese medaka): 101156257
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Entry
101156257 CDS
T02443
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101156257 (ttc28)
Cilium and associated proteins [BR:
ola03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
101156257 (ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_16
TPR_SusR
RPN7
TPR_11
TPR_17
TPR_14
DUF6340
TPR_BSK1_C
TPR_19
TPR_9
TPR_NPHP3
TPR_6
PUB
TPR_YpiA_C
BTAD
HlyE
ARM_TT21_5th
ANAPC5
Wzy_C_2
DUF3856
Motif
Other DBs
NCBI-GeneID:
101156257
NCBI-ProteinID:
XP_011477665
LinkDB
All DBs
Position
9:complement(17866732..18089327)
Genome browser
AA seq
2476 aa
AA seq
DB search
MEKQPTLKEKLSIFSSRTAGRPARCLAADSMAGCGLSKAGFMEKVQQSNEACQRGDFQAA
VRLYSEALQADPQNCILFSNRSAAFLKLGEHQAALDDAERACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRGSLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLQLSPELQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELCDVSGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELSRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRLQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLAIARETRDRLLEGDASCGLGAVYQAMGEYETALRCHQSDLEIAEEAGSTVRQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVSSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVSEGGSDFQ
DGGGSGVVGGSSLEQHIASAREALGVESYYSRGCSNSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGSSSLPRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIH
GLGSSAKAYSRRPGPAPCGGISMAAVVGNPKLPSPVMDRWLWGPMPSAEEEALMVAELLG
CQPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTPNSEVGPGGANASVGTMGRG
AGGRRGSNSRSRKGSISSGYTIPESFHMQDDSSDVESICDSPPLQEFLLTAADILDLRLP
VKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKVFVHAFYSALL
NGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPDR
ARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSVGT
GMPAAVFFPTADPGDRLQQCSNTLQSLLGLPPPALQAMCKLITASEAGEQLINRAVKNMV
AMLHQVLVQLQTGEKEQDFSVLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLK
TGKMANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPMAYSSLPF
SPPCLDNQASDAISVYSLSSVASSMSFASKSDCDFLSHRQRGGATAHYSLHKHPHVPRSH
SSPHGAAAAGAGARGDEEEYEGFSIISSEPLGTHCDSLPLPPGHSQRHHRGGRGLGGSST
GAGRGYSVSVSSRGSVSTPTSPIKPALVPSPNSPFQKVGKVSSSDTGESDQSSTETDSTV
KSQEEKPAPLNPQELAQKILEETHSHLRAVGSLQRLGADGGTAAANSTRSSAFRSSETSA
FSRPSSSASGRAQSSPRPKPPSRSSSLQKISSGYNSPAVSESSQKDDSHTSPTLDSIAQF
KLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSSCSASVDAPDLDRLR
RGVIDEKVQAIHNLKTFWANAAAQQQHLGPVKAVHNTSGSLASASKDVLSLLNLSPRRCS
PNDCQDNLELRELGLSSLDRGSKNSSNGNHCPNSRKLTSSPTVSTSSSPGARSIRLPAGN
GYKFLSPGRFFPSSKC
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaaccgactctgaaagaaaagctttccatcttcagctctcggactgccggc
aggcccgcgaggtgtctggctgcagacagcatggccggctgtggcctcagcaaggctggg
ttcatggagaaggtgcagcagagcaacgaggcgtgccagcgcggggactttcaggccgcc
gtccgcttgtacagcgaggctctgcaggccgacccgcaaaactgcatcctgttcagcaat
cggtcggctgcttttctcaaacttggggaacaccaggcagctcttgacgatgctgaaaga
gcttgtgaactcaatcccaagtggccaaaagcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgctctggccgcctttgcctccgggctggcccaagaccca
aagagcctgcagctactggtgggcatggtggaagccgccatgaagtcaccattacggggt
tctctggagcccacctatcagcagctgcaaaagatgaagctggacaaaagtccgtttgtg
gtggtctctgtgattggccaggagctgctgacagcaagccaccacacagcgtctgtggtg
gtgctggaggccgctttaaagatcggcacgtgcagcctcaagttacgcggctctgtcttc
tcggcgctcagcagcgcccactggtccctgggcaacacggagaagagcacaggatacatg
cagcaagacttggaagtggccaagactttaggtgaccaaacaggggaatgccgtgctcat
gggaatctgggctcggcattcttctccaaaggcaactatcgtgaagctttgaccaaccac
cgcaaccagctggttctggccatgaagttaaaagacagagaggctgcctccatggctctg
agcagcctgggtcatgtgtatacagctataggggactatccaaacgccctagccagccac
aagcagtgcgttctgctggccaagcagtccaaggatcaactgtcagaggcccgggagctg
ggaaacatgggggcagtttacatcgccatgggagactttgaaaacgctgttcaatgtcac
gagcaacatttaggcattgccaaggccctggaaaacaaacgggaggaagccagggcctac
agtaacctaggcagtgcctaccactaccatcgcaactttgacaaggccatgtcctaccac
acgcatgttctagagcttgctcaggagctggaggaaaagtccatcgagatgagagcctac
gcagggctgggtcatgccgccagatgtatgcaagacttggagagggccaagcagtatcat
gaacagcagctgtctattgctgagggactgaaggacagggctgcagagggaagggcctcg
tccaacttgggcatcatccaccaaatgaaaggggactatgaaactgcactgaaactccac
aaaacacacttagccattgctcaggagctaaatgactatgctgctcagggccgagcttat
ggtaacatgggcaatgcctacaatgcccttggagccttcgaccaggctgtccgctaccat
cgtcaggaactgcagatctctatggaagtcaatgaccgagcttcgcaggcctccacccat
ggcaacctggcagtggcttaccaagcccttggtgctcatgatcgtgcactacaacattac
cagaaccatctcaacatcgcccgggagctcagagatgtccaaagtgaggcacgagctcta
ggaaacctagggaacttccactgctctcgaggggagtttcctcaggctgtgccctactat
gagcagtacctccagctgtcccctgaactccaagacatggaaagtgagggcaaagtttgt
cacaacctgggttatgcccactactgcttgggaaactaccaggatgctgtaaagtactat
gaacaggacctagctctggcaaaagatctccatgacaagttgagtcaggcaaaggcctac
tgtaaccttggtctggctttcaaagccttaggggactttactaaagctgaggagtgtcag
aagtacttgttgtctttggctcaatccttgaacaatgcgcaagctcgctttagagcttta
ggcaacctgggagacatatttgtctgtaaaaaggatgttgctggagccattcagttctat
gagcaacaactggctttggctcaccaggtaaaggagcgtagaatggaggcatgtgcctac
gctgcccttggagccacatacagacttgtgcagaaatatgacaaagccctgggttatcac
acccaagagttagaagtataccaagaactctgcgatgtctctggagagtgcaaagctcat
ggccacctggcggccgtctacatggccctcgggaagtatgctatggcttttaagagctac
gaggagcagttagagctcagtcggaggttgaaggaccctgttgtggaggcccaagtctat
ggcaatatgggtattacaaaaatgaatgtaggggtgatggaagaagcaattggataccta
gagcagcagctggctactttgcagcagctgagtggaaacgaagcagtaatggaccggggc
agagcctatggaaacctgggggactgttatgaggccctgggagactttgaggaagccatc
aagtactatgaccagtatttatctgtggctcagagcctaaatcgcctgcaggaccaggag
aaagcttatagaggcttaggcaatggacacagggctatggggaacctgcagcagtcgctg
gtgtgctttgagaagcggctggttgtggcacacgaactcggcgagtgtggaggcaaagct
caggcctatggtgagcttggcgctctccacagccaactgggcaattacgagcaggccatt
tcctgcctggaacgtcagctggccattgctcgtgaaacccgggataggttactagaaggc
gatgccagctgtggcctgggtgcggtttaccaagcgatgggagaatatgagacagctctg
cggtgccaccaaagtgatctggagattgcagaagaggcaggaagcaccgtgcgccaggcc
cgcgcctatggaaacttgggcctcacctatgaatccctcggaaactacgagcgggcggtg
gtgttccaagaacagcacctaagtgtagcggctcagactaacgacctggctgccaagaca
ttggcctacggcagcttgggaagaacacaccatgcgctgcagaactactcacaagctgtc
atgtacctgcaggaaggcttacggctggcagagcagctggctcgacgcgaggatgaagct
aagatccgccatcgtctggggctatccctctgggctagtgggaacctggaggaggcccaa
caccagctttaccgtgcatctgcattgtttgagaccatccgccatgaagcccagcacagc
acagactataaactctccctgtttgacctgcaaacatcttgctaccaggctctccaaaga
gtcctcgtcagccttggacaccacgacgaggccctggcagtggcagagcgaggccgcact
cgagcctttgccgacctcctggtggagaggcagacaggccagcaggactcagacccttac
acgccagtaacggtggagcacatcctggacactgtcagcagtcagagggcgttggtgctt
tacttctccatggctgcaggctacctgtacagctggttgctggctccgggagcaggcatc
ctgaagtttcatgaagtttatttaggtgagggcgtctcagaaggagggtcagatttccag
gacggaggtgggagtggagtggtcggtggctcctcgctggagcagcacattgccagcgcc
cgggaggctctaggtgttgagtcttactacagcagaggatgttcaaacagcgagacggag
agcgaggctggagatttgttggaccaacaattcgaggagctcaacaacaagcttaactcg
gtcaccgatccaacgggcttcctgcgcatggtgtcaagaaataacctgttcaacaggagc
tgccagagtatgaccagcctgttcagtaacaccatgtctccagccaaagatggtagctct
tcgctgccccgtcgctctagcaacctcggaaaacctccactccgggcactttatgatcta
cttattgcacccatggaagggggcctgatgcactcaagcgggcctgttggcagacataga
cagctggtgatggtgctggagggagaactttacctcatcccgtttgccttgctcaaagga
agctcctcaaatgaatatctgtacgagcgtttcagcctcatcgctgtgccctctatccat
ggccttggatccagtgcgaaggcatattcccggcgtcctggaccagctccatgtggtggg
atctcaatggcagcagtggtgggcaaccccaaactgccctcacccgtgatggaccgctgg
ctctgggggcctatgccctccgcagaggaggaagctctgatggttgccgagctgctggga
tgccaacccctggctggttcttctgccactaaggagagagtgatgagtgccctcacacag
gctgagtgtgcccattttgccacccacatttcctggaaactggcagccctggtgctcacc
ccaaactctgaggtggggcctggaggagcaaatgccagcgtggggacaatgggtcggggt
gcaggcggaaggagaggcagcaacagtcgaagcaggaagggctccataagcagcggttac
accatcccagagtccttccacatgcaggacgacagcagtgatgtggagagcatctgtgac
agccctccactgcaggagttcctgctcacagctgcagatatattggacctcaggttacca
gtcaagctggtggtgcttgggtcgtaccaggagtccagcagcaaggtcacggcggatggt
gtggttggactgaccagagccttcctggctgctggtgctcagtgcgtcctggtgtctttg
tggcccgtccctgtcgcagcctccaaagtatttgtccatgctttctactctgccttgctc
aatggaaccaaggctagtgccgcactggcagatgccatgaaaactgtccagagcagcaag
cagtactcacatccgtccaattgggcaggttacatgctgattggtaatgacgtgaagctt
aacagcccatcttctctgattggccaagctttggctgaaattttacaatacccagatcga
gctcgagatgctttgagagttttactccatctggtggaaaagtctctacagcggatccaa
aatggccagcgaaattccatgtatacatcgcagcagagtgtggagaacaaagtagggggc
gtccccgggtggcaggccctgctaacggctgtgggtttccggctggactctgtaggcact
gggatgccagctgcagtcttttttcccactgcggacccaggggacagactccagcagtgc
agcaatactttacagtcactactaggtctgccgccgccagctctccaggctatgtgcaaa
ctcatcacggcttcagaggcaggagagcagctcatcaaccgggcggttaaaaacatggtg
gcgatgcttcatcaggtgcttgtccaactccaaacaggagagaaagagcaggacttttct
gtgctgcccatccaagtgtccatcagtgtacagttatggagactaccgggatgccacgaa
ttcctggctgctcttggatttgatttatgtgaggtgggccaagaagaagtggtgctgaag
actggcaaaatggccaatcgccgcaccttgcactttgctcttcagtcccttttggcgctg
tttgactccacagaactgccgaagcgtctaagcctggatagctcatcttcccttgagtcc
ttagcttctgcacagtctgtgtccaaccctttgcccatggcatactcaagcctgccattc
tctcctccttgcctggacaatcaagcatcagatgccatatctgtctatagcctcagctct
gtggcgtcctccatgagctttgcctccaagtcagattgtgattttcttagtcatcggcag
cgcggcggggccacagcacactattctctccacaaacaccctcatgttccacgtagtcat
tcatcccctcatggtgcagctgctgctggggcaggggcccgaggggacgaagaggagtat
gaaggcttttccattatcagcagcgagccgcttggaacacattgtgactctctgcctttg
ccgccaggacacagccagcggcaccacagaggaggaagggggcttgggggttccagcaca
ggggccggaagaggctactctgtgtccgtctcatcaaggggcagtgtcagtaccccaacg
tcccccattaagccggcgttggtgcctagcccaaactcaccatttcagaaggtgggtaag
gtgagcagctcagatacgggtgagtcggaccagtccagcacagagacagacagcacagtc
aagtctcaggaagaaaaaccagcccccctcaatcctcaggagctggcccagaaaatcctg
gaagagactcacagccacttgcgtgcagtaggtagtcttcagaggctaggcgctgatggt
ggtacagctgctgcaaactcaacgaggagcagcgcatttcgctcttctgaaactagcgca
ttcagccgtcccagcagcagtgctagtggccgagctcagtcttccccaagacccaagcct
ccctcccgttcttcctccctgcagaagataagctccggttacaacagccctgctgtctcg
gaatcgtcccaaaaggacgacagtcatacatcaccaactttagacagcattgcacagttc
aaattgaagtacccgagttctccatacagtggccacatctctcgctcccccagtaatgta
tctcctagttctggtcaccagtctcctgctggaagtgctccttctcctgctctgtcctac
tcatccacgggctcttcctgttctgcatctgtcgacgctccggatttggaccgactaaga
agaggtgtcattgatgaaaaagttcaagctatccacaatcttaaaacattttgggcaaat
gctgcagctcaacaacagcatctcggtcccgtcaaagctgttcacaacacttctggatct
cttgcttctgccagtaaagatgttttgagccttctgaacctgtccccacgccgctgctcc
cccaacgactgccaggacaacctggaactgcgggagttgggactgtcgtcactggatagg
ggtagcaagaactcttccaatgggaaccactgccccaactccagaaaactaacctcgtcc
cccactgtttccacaagcagcagccccggggctcgttccatccgactaccagcaggaaac
ggatacaaattcctgtcacctggaagattttttccttcatcgaaatgctga
DBGET
integrated database retrieval system
