Oryzias latipes (Japanese medaka): 101156314
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Entry
101156314 CDS
T02443
Symbol
rfx7
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101156314 (rfx7)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Other basic domains
RF-X
101156314 (rfx7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
101156314
NCBI-ProteinID:
XP_011489720
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All DBs
Position
3:21538899..21556673
Genome browser
AA seq
1394 aa
AA seq
DB search
MADGDPQQADGGEGSLPGLLPGLQGAEASVLQLRIKNSICKSVQSKVENILQDVEKFSDI
EKLYLYLKLPSGPCSSADKSDHSSLSSSRTQQMHAFSWIRDHLEEYPETSLPKQEVYDEY
KSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGKSKYCYSGLRKKPCVHMPSLPML
DLSKTAEGHQSDVPELPGQLSSIKDEVRFAACDLVCEWAQKVLKREFDAVEDLARFLVDS
HNISNKSLAALTVLTSAATEVKPLQSVSAFAPMPQAHPFQPHMTMLSSPSVDAKQQLQKK
IQRKQQEQKLHSPLPANRQTRRADEGVACSSPTPQSPQPAIGSVVASVPSPITVQRSSQL
MSPSPVATMESKVLPINFQMVPQPVQAITQSPKPLLTSPAGERTARQRYAQILPKPAVTT
SISLHSPSTMIITNSPVRTVMTSCHVSPVSLVNMTASSLAANGNETTSTMANASMQLTAQ
ASRSAAGESGFNQSHILAPVDKAGQFSATQNIDVEMEVEAIHKNTQMQIPSSQVFTEALT
GNRPGGALQRAASVPIPQTKSFLSLEEAPKYNERASASHNTANGNNGANSSSTFLLNTSN
QSTNSISLLSTSRFSSFGENSQAKEDFTSTKNFRKRSCLSAELSPVKRAFVTDQPAEGAI
SLGFDIRNQVGNVFDVGAPARPESAPACREVEMIINSVLSTQDHTQCTSSFTACHFDSVA
KTDGSLQRKNTSAVLETGTSVHHAVLQEQQGHIMAHVHAVPSKPAFQKHTGVRSNSTTGN
LEGAQQHTFVRSSPAVHTLPFLNQTPSGLLTSHDHMDYFSFDDDVTQDSIVEELVQMEEH
MKLKRLEDFRNSDIVHSQHVSMQSSMKSTNQTMTAVTYAANNCNPIQTSSPTSEIMGGPH
TLTAESPFSRIASTTPVDSALGSSRYTPAGTPHSNCSSTVPPSPVECRNPFAFTPINSTG
FHDNSSSVSSSPVKPMQRPMATHPDKARLEWMNSSYNSGVGATNKASSGMGILSSYQGLI
DDQFRKPHAFAAPHSHHYDSHFGRLTPISPVQQQVASMTKQEGFAVPAPLDNKTTNSSAA
SFRCRSVSPALHQRNMTGNAVNSSLPNVARLVGSPFHSPVTPEVLSIFSNSETSLGSSSM
AQRSRSVPANIMMESEALPTHGQLCSNRNIASVLLSKLDRDQNDSTRCLGINNLPSTYSA
RMNLTQILESSSNLSCTDNHHSLRSSDSASACSSQRLNSLTDKAMNEPIMLSAGSNQVPS
SYRGQPQQHTQAVMFATSSQQQEDELQRQQHLDFSSTQHLLDRSLEQGSELTTGTADFPC
EIRMTSELSSSISDLNGLDTNLLFNPNQPQGQYQNTASEEPGNDELFLQMSESQHSSGLD
WLESKDHPTVGLMG
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggagacccccagcaggcggacggcggggagggcagcctacccggccttctc
cccgggctgcaaggtgctgaagccagcgttttgcagctccggatcaagaactccatctgc
aaatctgttcagtccaaagtggaaaacattctgcaagatgttgagaagttctcagatatt
gaaaagctttacctctacctcaagctgccctcgggtccctgcagctctgctgacaaaagt
gaccacagctccctgtcatccagccgtacgcagcagatgcatgcgttcagctggatccgg
gaccatttagaggagtaccctgagacctctcttcccaagcaggaggtctacgatgaatac
aaaagcttctgtgacaatctcaactaccatccactgagtgctgcagactttggaaagatg
atgaagaatgtcttcccaaacatgaaagcccgccgacttggcatgagaggaaaatcaaaa
tattgctatagtggactgaggaaaaaaccctgcgttcatatgccttctttgccaatgctg
gacttaagtaaaacagcagagggacaccagagtgatgtgccggagttgccgggccagcta
agcagcatcaaggatgaggtgcggtttgcagcctgtgatcttgtctgcgagtgggcccag
aaggtcctgaaacgagagtttgatgccgtggaagacctggctcgcttccttgtagacagt
cacaacatcagcaacaagtctttggcagctctcacagtcttgaccagcgcagcaacagag
gttaaacctttgcagtcggtctcagccttcgcccccatgcctcaggctcaccccttccag
cctcatatgacaatgctatcatcaccatctgtggatgcaaagcagcagctgcagaaaaag
atccagaggaagcagcaggagcagaagctgcactctcctctacctgcaaacagacagacc
aggagagcagacgagggtgtggcctgcagtagcccaacacctcagtcaccacagccagcc
ataggcagtgtggttgcctctgtcccaagccccatcacagtacagaggagcagtcagcta
atgtccccaagccctgtggcaacaatggagagcaaagtgctgccaattaatttccaaatg
gttccccagccagttcaagcaataacacagagccccaagccgctgctcacaagtccagcg
ggggagcgtacagctcggcagcggtacgcccaaatcctgcccaagcctgcagtcaccacc
tcaatctctctgcactcgccttccaccatgatcatcaccaacagccctgttaggactgtg
atgacttcgtgtcatgtcagccctgtcagtctagtcaatatgacagcctcgtcactggca
gctaacggcaacgaaacaactagcaccatggcaaacgcttctatgcagctgacagcgcag
gccagcagatctgcagctggagaatcaggattcaaccagagccacattctggctcctgtc
gacaaggcaggccagttcagcgccacccaaaacattgatgttgagatggaagttgaagct
attcataagaacactcaaatgcaaattccaagcagccaagtttttactgaagcattgaca
ggaaatagaccaggaggtgctttacagagggcggcaagtgttcccatacctcagaccaaa
tcctttctgagcctagaggaagcgcctaaatacaacgagagggcctctgcaagccataac
actgcaaatggcaataatggtgcaaatagttcaagcaccttcctgttaaatacttccaat
cagagtaccaactcgatttctttattaagcaccagcagattttcttcttttggggaaaac
agccaagccaaggaagatttcacgtctacaaagaatttcaggaaacgctcttgcctcagt
gcggaactttccccagtaaaaagggcttttgtgaccgaccagccagcagagggtgctatt
agtctgggatttgatataagaaaccaagttgggaatgtctttgatgttggtgctccagct
agacctgagagcgcaccagcctgcagagaggttgagatgataattaactctgtcttgtct
actcaagatcatacacaatgtacttcctctttcacagcctgccactttgactctgttgcc
aaaacagacggctcattacagaggaaaaacacctccgctgttttggaaactggcacctca
gtccatcatgcagttttgcaggaacagcagggacacatcatggctcatgtgcatgcagta
cccagcaagcctgcttttcagaaacatacaggtgtgagatcaaactcaaccacagggaac
ctggaaggagctcagcagcacacatttgtgcgctccagtcctgctgtccacaccttaccg
tttctgaatcagacaccatccggtctgctcacctcccatgatcacatggactatttttcc
tttgatgatgatgtgactcaggatagtattgtggaagagctggttcagatggaggaacac
atgaaacttaaacgcttggaggactttagaaacagcgacatagtgcacagccagcatgtt
tcaatgcaaagcagtatgaaatccaccaatcaaactatgacggctgtcacctatgccgca
aacaactgcaacccaatccaaacttctagtcctacatctgaaattatgggaggaccccac
accctgacagcagagagtccattctcccgcattgcttctacgactccggtggacagcgcc
ttaggaagcagtcgctacactccagctggaactccacactccaactgcagcagcactgtt
cctccaagtccagtggagtgcaggaacccgtttgcgttcacccccatcaattccacaggt
ttccatgacaacagcagcagtgtttccagtagtcccgtgaagcctatgcaaagaccgatg
gccacccacccagacaaggccaggctagagtggatgaatagtagttacaacagtggtgtt
ggggccacaaacaaggcaagcagtggaatgggaatcctctccagctatcagggtctgata
gatgaccaatttcgaaagcctcacgcctttgcagctcctcactcacaccactatgatagt
catttcggccgcttgactcccatctctcctgttcagcagcaggttgcaagcatgacaaag
caagagggttttgctgtgcccgcccctttggataataaaaccaccaactcatctgctgca
tcattccgatgccgaagcgtgagccctgcattacatcagaggaacatgactgggaatgca
gtgaacagttctcttcctaatgttgctcgattagtcggatcaccgtttcattctcccgtg
actcccgaggtgttaagcatattttctaatagcgagacaagtcttgggtccagtagcatg
gctcagagaagccgttctgtgcctgccaacatcatgatggaaagtgaagccctccccaca
cacggtcaactatgcagcaacagaaacatagccagtgttctcctgagcaagctggacagg
gaccaaaatgactcaacgcgttgtttgggcatcaataatttaccttccacctattctgcc
cggatgaacctcacccagatcctggaatccagctccaatctctcctgcaccgacaaccac
cacagtctgaggtcctcagattctgccagtgcttgcagctcacagaggctgaattccctc
acagacaaagctatgaatgaaccaattatgttatcagcagggagcaaccaagtgccatcg
tcctatcgagggcaacctcaacagcatacccaggctgtaatgtttgctacgagctcacaa
cagcaggaagatgaacttcagcggcagcaacacttagactttagcagcacgcagcacctc
ttagacagaagtctggagcaggggtctgagctgaccacaggcactgcagactttccctgt
gaaatcagaatgacatctgagctctccagcagcatcagtgaccttaacggactagacaca
aacttgctgttcaaccccaaccagccgcaaggccaatatcaaaacactgcatcagaggag
ccaggaaatgacgaactgtttctgcaaatgagtgagtcgcaacattcaagtggacttgac
tggctagagagcaaagatcatcccactgttggcttgatgggctga
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