Oryzias latipes (Japanese medaka): 101156318
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Entry
101156318 CDS
T02443
Symbol
rad54l2
Name
(RefSeq) helicase ARIP4 isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101156318 (rad54l2)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101156318 (rad54l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
101156318
NCBI-ProteinID:
XP_023810526
LinkDB
All DBs
Position
5:complement(4867920..4886856)
Genome browser
AA seq
1480 aa
AA seq
DB search
MSEEALSDSDLEASVDSEEDYLENMEEEDEDMGEDENDGDDEDESVDRPGSNQSQTEEAQ
DENESPSTTSGEPSSQPASGSSSRAPSRPASRSQSAENERKPAISKAKKQKASKLSKPAK
GSKAPKLSKPAHMRKNIRKLLQEDQLEAGTKAAQQEEMERRKRLEQQRKDFPTLTPAVPD
AQLAVDAAALLGDVSHLVPAILGQQDVICLDSSGEEDVKEEPKLPPLAIIDDVIELSSGD
EDTLQISSESAEDDADGVPGSEESSGAHINDALNLPDAQGRVLVNINHPAEEKDIFLAPQ
LARAVKPHQVGGIRFLYDNLIESLERYKTSSGFGCILAHSMGLGKTLQVISFIDILLRNT
EAHTVLAIVPVNTLQNWLTEFNLWLPPSEALPPDTDPSVVLARTFKVHILNDEHKTTLAR
AKVVEEWSRDGGVLLMGYEMYRLLSMKKSFVMGKKRKSKKPAGPVIIDLDEEDRQQELMK
GIEKAIARPGPDVVICDEGHRIKNYHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMV
DFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHDV
LRDQLPAKDEHVILVRLSSVQRALYTEFMKRFREAGNSGWLGLNPLKAFCVCCKIWNHPD
VLYEALQKENQANEQDLDLDDITSAGNARCPAPSTGLKAKVTDSSNSKVNSSLPPLNASQ
DRTNQVITYEWAKDIMSNYRMGVLENSAKMLLLFHIIDESVRKRDKLLVFSQSLSTLTVI
EDFLSKRPMPQNINSSDSQNQNWVRNLNYYRLDGSTSASERERLINQFNDPENNKTWVFL
LSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQVKRCYIYRLVCDFTLEKK
IYDRQVSKQGMSDRVVDDLNPVLNFTRKEVESLLHFVEEEPETEKISLESQNEYEEVMFK
ACQLYPNLITKPPFHHESLLVDRKESKLTKAEKRAAKKSYEEEKRASVPYSRPSYAPYYP
TSEYTLASIAAFNQRGWHHLSRPDDKPVASVRPIQSTPIPMMPRQAGLGVAGSSSAGSLP
VNFLQKAGVYVQRIVTTTDIVIPGANSTTDVQARISAGEVIHIIRGSKGTYIRTNDGRIF
AIRSGKISRPVTTGSGAPGEAQLVHHPVSNGCSSPVDQQRRSPVSDQRSSSPLSSEILRE
ITRYSLSADEAPGGGDNASQSLDVPTDRDAAQSCERGRQLSDDLLRSALEMRGSKRKREE
SQGSTQIQDEPGSAAAQFPGMAMSSGGLSFPPVGLNSSSLLGNLGHMSHQLLMAGGGGSS
FLQTPRQTMADLQTMFPTPSTDHLRQPPTGNGHLPPPSSSSAFSSTATSIPMSSAASAAT
SSSLPPYLMNPNMAGLLTSRFPLTYSQSLLSEPRMFPSSLLAGTGGFSASNSSSAAGFLP
PFNNPTSSLLGAALTQPDRYPGAVNGGDSSDDDVIEVTGQ
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaggcattatcggatagcgacctggaggccagcgtcgacagtgaagaggat
tatttggaaaatatggaagaggaggatgaagacatgggtgaagatgaaaatgatggcgat
gatgaggatgagagtgttgatcgacccggaagtaaccagagccaaacagaagaggctcaa
gatgaaaatgaatctccttcaaccacctccggagagccttcttctcagcctgcatctggc
tcctcttccagggccccctccagacccgcgtcccgttctcagtctgcagagaacgagagg
aaaccagcgatcagtaaagcaaagaaacagaaagcctcgaaattatccaagcctgcaaaa
ggttccaaagctcccaagctatcaaagcctgcacacatgaggaaaaacattagaaagctg
ttgcaagaagaccagctggaggctgggaccaaggcagcgcagcaggaagagatggagcga
cggaaacgactggagcaacaaagaaaggattttcctaccctgactccagctgttccagac
gctcagctagcagtggatgcggcagcattgttaggggacgtgtctcatttggtccctgcc
atactgggccagcaggatgtcatctgtttggacagcagtggtgaggaagatgtaaaagag
gagccaaagttgcctccgcttgcgatcatagacgatgtaattgagctcagctcaggagat
gaagacaccctgcagataagcagcgaatcggctgaggatgacgctgatggcgtccccggc
tcggaagagagcagcggcgcacacatcaacgatgcgctcaacctgccggatgctcagggt
cgggtgctagttaatataaaccaccctgcagaagagaaagacatatttcttgccccacag
ctggcgagggctgtaaagcctcaccaggttggtggaatccggtttctctacgacaacctc
atcgagtctctagagcgctacaaaaccagcagcggctttggctgcatcctcgctcacagc
atggggctgggcaagacactacaggtcatttctttcattgacatcctgctgaggaacact
gaagcccacaccgtgctggccatcgtccccgtgaacacccttcagaactggctgacagaa
ttcaacctctggcttccgccctctgaggctcttcctcctgacacagatccttccgtggtc
ctagctcgcacttttaaagttcacattctcaacgacgagcacaaaacgacacttgccagg
gcgaaggttgtggaggagtggtctagagacggaggcgtgttgctgatggggtacgagatg
taccgcctgctttccatgaagaaaagttttgtgatgggtaagaagaggaaatcaaagaaa
cctgctggccctgtcatcattgaccttgacgaagaggaccgacagcaagagctcatgaaa
gggattgaaaaggccatagcccggcccggtcctgatgtggtgatctgtgatgagggccac
cgcatcaaaaactaccacgccagcacatcgcaggccctgaagaacatccgctcccggcgc
agggttgtgttgacgggctatccgctgcagaacaacctcatcgagtactggtgcatggtg
gactttgtccggcccgacttcttaggaacgcggcaggagttcagcaacatgtttgagcgg
cccattctcaacggtcagtgtgtggacagcacacctcaagacgtacgcctgatgcgctac
cgcagtcacgtgctgcacagcctgttagagggctttgttcagagacgaggccatgatgtg
ctaagagaccagctgccagcaaaagatgagcatgtcattttggtacggctgtcctctgtc
cagagggcgctgtataccgagttcatgaaacgttttcgagaagctgggaatagcggctgg
cttggtctcaacccactcaaagccttctgcgtgtgctgcaagatctggaatcacccagac
gtcctctatgaggccttacagaaggaaaaccaggccaatgagcaagacctggaccttgat
gacatcacttcagccggtaacgcccgctgccctgcgcccagcacgggcctaaaggccaaa
gtaacagactccagtaacagcaaagtcaacagtagccttccaccactcaacgcctcccag
gacagaaccaaccaggtcattacatatgaatgggcaaaggacatcatgtcaaactacagg
atgggagttctggagaactctgccaaaatgttgctgctcttccatataattgatgagagc
gtcaggaaaagagacaaacttttggtcttcagccaaagtttgtccacgctgacggtcatt
gaggacttcttatccaagagaccgatgcctcaaaacatcaactcttctgacagccagaac
cagaactgggttcgcaacctcaactactacagactggacgggagcacctccgcttcagag
agagaacgccttataaaccagttcaatgatccagaaaacaacaaaacctgggtctttctg
ctttccaccagagcgggctgtttgggggtaaatctgattggtgccaatcgcgttgttgtt
tttgatgcttcctggaacccctgtcacgacgcccaagccgtgtgccgcgtgtaccgctac
ggccaggtgaaacgctgctacatttaccggctggtctgtgacttcaccctggagaagaag
atctacgacagacaggtgtccaaacagggcatgtctgatcgcgtcgtggatgatttgaat
ccggtgctgaacttcacccggaaggaggtggagtctctgctgcactttgtagaagaggag
ccggaaacggagaaaatctctctggaatctcagaatgaatatgaggaagtgatgttcaaa
gcttgtcagctctatccgaatctaatcaccaagcctcctttccaccatgaatctctgctt
gtggaccgtaaggaatccaaactcactaaagctgagaaaagagctgcaaagaagagctat
gaggaagagaagcgagcatctgtgccgtactctcgtccttcatacgctccctattaccca
acaagtgaatacacacttgcaagcattgctgcattcaatcagcgaggctggcaccacctg
tccaggcctgatgacaaaccggtggcgagcgtccggcccatccagtcgaccccgatcccc
atgatgcctcggcaagccggcctgggcgtggctggctccagctctgccggcagcctcccc
gtcaacttcctgcagaaggctggagtttatgtgcagaggatcgtcaccacgactgatatt
gtcattccaggagctaacagtacgacggacgttcaggctcgcatcagtgcgggggaggtc
atccatattatccgaggatccaaaggtacctacatcaggacaaacgacgggagaattttt
gccatccgatcggggaagatcagtcgacctgtcacaacggggtccggcgctccaggagaa
gctcagttggtccatcatcctgtcagcaacggctgttcgtcacctgtggatcagcagcgc
cgctccccagttagcgaccagcggtcgtcgtctccgctgagctcagagattctccgggag
atcacccgctactctctgtctgcggacgaggcccccggcggcggggacaacgcctcgcag
tcgctggatgtgccgaccgacagagacgctgcccagagttgcgagcgcggcaggcagctg
agcgacgacctgctgcgctcggccttagagatgcgggggagcaaacgcaaacgcgaggaa
agtcagggcagcacgcagatccaagacgagcccggctctgctgcagcccagttcccagga
atggccatgagctccggcgggctcagttttccccccgtgggtttgaactcttcatcctta
ctggggaacctcggccacatgagtcaccagcttctgatggcgggcggcggtgggtcgtca
ttccttcagacgccaaggcaaacaatggccgacctacagactatgtttcccacgcccagc
acggaccacctgaggcagccacccacaggaaacgggcaccttcctcctccctcctcatcc
tctgctttttcttccactgctaccagcattccaatgtcctctgcggcctcagcagcgact
tcctcctctctccctccttacctaatgaacccaaacatggccgggcttctcacatcccgg
ttccctctgacttacagccagtcgctgctctcggagccgaggatgttccccagctcgctc
ctggcaggaaccggggggttctcggcgtccaactccagctccgcagccggctttctgccg
ccgtttaacaaccccacttccagccttttgggggcagctctcactcagcccgacagatat
ccaggtgcagtaaacggaggcgatagttcggatgatgatgtcatagaggtgacaggacag
tag
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integrated database retrieval system
