Oryzias latipes (Japanese medaka): 101156340
Help
Entry
101156340 CDS
T02443
Name
(RefSeq) POU domain, class 2, transcription factor 1
KO
K09364
POU domain transcription factor, class 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101156340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101156340
03021 Transcription machinery [BR:
ola03021
]
101156340
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101156340
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
101156340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
101156340
NCBI-ProteinID:
XP_011479312
LinkDB
All DBs
Position
11:16623219..16685551
Genome browser
AA seq
749 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLAPRSSPDIKMAKASGEEKPGVDYPGDSSDSDRN
SPDEQVQTIKSSPYSLSPSTGTKGKSEERSEMTHSIAPPVPPSQQHQQQQQHQQQQQQAQ
HHHTQLMLAGSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAQAAAQQQA
NQQQQNQTQSQQQQPTKQEQAVQAAPPQLALSQPIQLTAQDIQQLLQLQQLVLMPGHPLQ
SPAQFLLSQPTQAQQQQQGLLSTPNLIQLPQQSAGGLITTPPRMGLQAQRDKISDVGSSG
SSGSAALPGGSSSVVTSAGATSASSSAMAASLSSSLTPAGQGAHMGEEPSDLEELEQFAR
TFKQRRIKLGFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDA
ETMAVDSMLPSPSSLSSPLMGMEGLPGRRRKKRTSIETNVRVILERNFSTNQKPTSEEIL
LMAEQLNMEKEVIRVWFCNRRQKEKRINPSSSTTPPLPSQTSPVVTHKAPCYSPHMISSQ
GLSQVTTSLSTTGASPSPSASCPMTPVSSATISSSATPPPHSTASPAPPNFGSSGLNTGN
TMMGVSTGMNQALIGSNPLATMQALAASGGQLSLSSLEGGQGHILLGGPGGPTVSSSLRP
SLFLNRPGLLPMVTSMATTSTPTMGLVSSSAGSGCGLRPSFCQSPPTGTSNLMSPSLCQE
ESVSPCSSPASFCSFSEASPPTLGGTMAD
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtgcccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggctccgcggtccagccccgatatcaagatggccaaagca
tcaggggaggagaagcctggagtggactacccaggggatagttcagactctgacagaaac
agccctgatgagcaggttcagacgataaaatccagcccctacagcctctcgccctcaact
ggcaccaagggaaagagtgaagagagatctgagatgacgcacagcatcgctcctcccgtg
cctccctcccagcagcatcagcagcagcagcagcaccagcagcagcagcagcaggctcag
caccaccacacccagctgatgctcgctggcagtcagctagcagggcttgccgctctcctt
ccggcccagcagcagctgctccttcaacaggctcaggctcagcttctagcagcggccgtt
cagcagtccaacgccgcccatgccgctcatgctgcccaagccgctgcacagcagcaagcc
aaccagcagcagcagaaccaaacgcaatcccagcagcagcagccgaccaaacaggaacaa
gcagtgcaggccgcccctccacagctggccctctcacagccgatccagctcacagcacag
gacatccagcagctgctgcagctccagcagctggttttgatgcctggtcatcccctccag
tctcctgcccagttcctcctgtcgcagccaacgcaggctcagcagcaacagcagggtttg
ctttcaactcccaatctgatccagctacctcagcaaagcgccgggggactgataacaacc
ccccctcgaatgggactccaagcacagagagataagatcagcgatgtgggcagcagcggc
agcagcgggagcgctgcacttcctggcggaagcagcagcgttgtgacatctgctggagcc
acctctgcctccagcagtgccatggccgcctccttatcctccagcctgaccccagcaggt
cagggggcccacatgggtgaagagcccagcgacctagaggagctggagcagttcgcccgg
accttcaaacaacgacgcataaagctgggattcacgcagggtgacgttggcgtggccatg
gggaagctgtatggcaacgacttcagccagaccaccatctcccgttttgaagctctcaac
ctgagctttaagaacatgtgcaagctgaagccgctgctggagaaatggctgagtgacgca
gaaacgatggccgtggacagcatgctgccaagtccctcctccctctcctctcccttgatg
ggcatggagggtctgccaggacggcgccggaagaaacgcaccagcatcgagaccaatgtc
cgagtgatcctagagcgcaacttcagcacgaaccagaagcccacgtcagaggaaatcctg
ctgatggctgagcagctcaacatggagaaggaggtgattcgcgtttggttctgcaaccgt
agacagaaggaaaagcgcatcaacccgtccagcagcaccacccctcctctacccagccag
acttcacctgtcgtgacgcacaaagccccctgctacagcccacacatgatatcgagtcag
ggtctgtcccaggtcaccaccagcctcagcacaacaggcgccagcccctcaccttcagca
tcctgccccatgactccggtcagctccgccaccatctcctcttctgcaactccgcctcct
catagcacagccagcccggccccacccaactttgggagctcagggctcaacactgggaac
acaatgatgggagtaagcacagggatgaaccaggccctcattggcagtaatcccctggct
accatgcaagcgctggcagccagcggcgggcagctgtctctctccagccttgaagggggt
caaggtcacatccttctgggaggacctgggggccccactgtttcctcttctcttcgtccc
tctctcttcctcaaccgccctggcctcctgcctatggtcacctccatggcgacaacctcc
acacccaccatggggttggtcagcagcagcgccggcagtgggtgtggcctgaggccctct
ttttgccagtctccgcccactggcaccagcaacctcatgagccccagtttgtgccaagag
gagtcagtgtccccttgttcaagccccgcctctttctgttccttcagcgaagcttcgcca
cccactttgggcgggaccatggccgactga
DBGET
integrated database retrieval system
