Oryzias latipes (Japanese medaka): 101156350
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Entry
101156350 CDS
T02443
Symbol
nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101156350 (nphp1)
Cilium and associated proteins [BR:
ola03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
101156350 (nphp1)
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Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
hSH3
Sigma70_ner
GAS
Motif
Other DBs
NCBI-GeneID:
101156350
NCBI-ProteinID:
XP_020565072
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All DBs
Position
15:complement(15303323..15310569)
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AA seq
689 aa
AA seq
DB search
MPLKRRGPLQLVQREVDELKKQVDNLVKDVQSKVGSNEEAFRRCQDLQMSAEKTLKTLQK
LTKAEEPAPVGNYDQRKQEEERRLQKIVERLNDLSLDLSPPGPSRDTGDVSKDESQREAN
EDEESSSDDDSDEDSDDKKAVKPPLQSDLWIYTVLSDFKGEEEGDLSVQRGEVLRIIRKT
VDGWWLAQDSKGNRGVVPKTFLKFGCGVDDDNEEDNGDEEDSEEEDEAEDEEVEAEVGKD
FNGEQDKNSSVSNWSTVRKALKEVDATDVLSAMGAIPPGFRPSTLGKLLEEEGETYRASR
YIKPELSQSQLSFKDLLLNPDTGRVHARQVKTSVCFTLWSCRLIPTPGVGVQVLSRHVRV
CAFDGSQVLSNIHTVRAAYNPKNPKTWSFSPKMTGLLPVLMDGDCFLRCNSVSPNLGILF
ELGVTFIRNSTGEKGELSCGWAFLKLFDETGNPLSNKTYELPVNGGTPYDKDVTLETSVS
RGSPGSVFQQMLNARRLPKLVVKMKSTNRRTRTQLSVLPETLLHCLSCVNLLALHRQLLA
EALLMDRVSIQNADLMCSPILSSFPVLLDQTDLLDALRSAWLEAENGMSKAQKRDLSYLK
QEFTKVYLSSAYFLLHSPSLPSYCWTDQPSEEQRARVIYSTLSTLQTSQQSSGQVGNADI
FSDSTQEHLAFEISEMTFDLLQAAVFNQE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttaaaagaagaggaccgttacaacttgtccagagagaagtggatgaactaaaa
aagcaggtcgataatttggtaaaggatgtgcaaagtaaggttggatctaatgaagaggct
tttcgaagatgtcaagatctgcagatgtcagcagagaagacactaaagactttgcaaaag
ctcacaaaggccgaggagccagctcctgtgggtaactatgatcagaggaaacaggaagaa
gagcgacggctgcagaaaatcgtggagcgtctgaatgatctttctctggatctttcacca
cctggacccagtcgtgacaccggtgacgtttcaaaggatgagagtcaaagggaggctaat
gaagatgaggaaagcagtagtgatgatgacagtgatgaagactcagatgataaaaaggct
gtaaagccaccattacaatcagacctctggatctacactgtcctgagtgatttcaaagga
gaagaggaaggagatctgtcagttcagagaggagaggtgttgaggatcatccgaaagacg
gtggatggttggtggctcgctcaggactcgaaaggcaacagaggagtggttccaaagaca
tttctgaagtttggctgtggtgttgatgatgacaatgaggaagacaatggcgatgaagaa
gacagcgaagaagaagatgaagctgaagatgaggaggtagaagcagaagttggcaaagac
ttcaatggtgaacaggacaaaaacagcagtgtctccaactggtcgacggtcagaaaggct
ctgaaagaggttgatgcaactgatgtgctgtcagccatgggagctattccaccgggattc
agaccatccactctcggtaaactgctggaggaggaaggtgaaacgtacagggcaagtcgc
tacattaaacctgagctcagccaatctcagctctcctttaaagacctcctcctgaaccca
gacaccggcagggtacatgctcgccaggtcaagaccagtgtttgcttcactttgtggagt
tgcaggttgattcccactcctggggtcggagttcaggtcctcagcagacacgtccgtgtc
tgtgccttcgatggatcacaggttttgagtaacatccacacagtcagagcagcatacaac
cccaagaaccccaagacatggagcttttctccaaagatgaccggcttgctgcccgtccta
atggacggagactgtttcttgcgctgcaactctgtgtctcctaatctaggaatcctcttt
gagcttggagtcacttttattcgaaattcaacaggggagaaaggagaattgagttgtggt
tgggccttcctgaaactattcgacgagactggaaatccactctctaacaagacgtacgag
ctgccagtgaatggtggcactccgtacgacaaagatgtcacattggagacttcagtctca
agaggatcccctggcagtgttttccaacagatgctcaatgccaggcggctgcccaaactg
gttgtaaagatgaaatcgaccaatcgtcgaaccagaacgcaactcagtgtgcttccagag
actcttctgcactgtctgagctgcgttaacctcctggctctgcaccgacagctgctggcc
gaggctctgctgatggaccgcgtttccatccagaacgcagatctgatgtgcagtccgata
ctctctagctttcctgtgctgctggaccagacggacctgctggacgctctcaggagtgct
tggttggaggctgaaaacggcatgagcaaagcgcagaagagagatctttcatatctgaag
caagagttcactaaagtctacttgtcatctgcatacttcctgcttcactcgccatccttg
cccagttattgctggacagaccagccctcagaggagcaacgagccagagtcatctattca
actctaagcactctccaaacctcccaacagagtagcggacaagtgggaaatgcagacatc
ttctctgactcaacacaggaacatctggcttttgaaataagtgagatgacatttgatctc
ctccaggcagctgtctttaaccaagaataa
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