KEGG   Oryzias latipes (Japanese medaka): 101156446
Entry
101156446         CDS       T02443                                 
Name
(RefSeq) charged multivesicular body protein 4c isoform X1
  KO
K24782  charged multivesicular body protein 4C
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04144  Endocytosis
ola04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101156446
  09143 Cell growth and death
   04217 Necroptosis
    101156446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    101156446
   03400 DNA repair and recombination proteins [BR:ola03400]
    101156446
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ola04147]
    101156446
Membrane trafficking [BR:ola04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    101156446
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101156446
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101156446
  Exosomal proteins of colorectal cancer cells
   101156446
SSDB
Motif
Pfam: Snf7 DUF5055 DUF6437 DUF155 PRD DUF3573
Other DBs
NCBI-GeneID: 101156446
NCBI-ProteinID: XP_023806215
LinkDB
Position
20:complement(20060829..20065519)
AA seq 239 aa
MEGASQVSRRHTEAPKMSKVSKLFSSSSKSKHHRSKGGPSAQEAIHRLRETEEMLTKKQE
YLEKKIEQEIATAKKHGTKNKRAALQALKRKKRLEQQLAQIDGTLSTIEFQREALENSHT
NTEVLKNMGFAAKAMKQVHQNMDLDKIDDLMQDITEQQEVAQEISEAISRPFGDTFDEDE
LLAELEELEQQELEDSMKNMGGLPNVPNSKLPARPGPRPTTKKRVEDDDDMHMLASWAT
NT seq 720 nt   +upstreamnt  +downstreamnt
atggagggagcgagtcaggtgtcacgacgtcacacagaggctccaaaaatgagcaaagtt
tcgaagcttttctccagctcctccaagtccaaacaccaccggtcgaaggggggcccgtct
gcccaggaggccatacacagactccgggaaacggaagagatgctgacgaagaaacaagag
tacctggagaaaaagattgaacaagaaattgcgacggcaaagaagcatggcaccaaaaac
aagagagctgcactgcaggccctgaagaggaagaagcgtttggagcagcagctcgctcag
attgatggcactttatccaccatcgagtttcagagggaagctctggagaactcgcacacc
aacactgaagtcctgaagaatatgggctttgctgccaaggccatgaagcaggtccaccag
aacatggaccttgacaaaatcgatgatctgatgcaggatatcacagagcaacaggaagtg
gcccaggagataagtgaagctatctccagaccttttggggacacatttgatgaggatgag
cttctggcagagctggaggagctggagcagcaagagttggaggacagtatgaaaaacatg
ggggggctgcccaacgttcccaactccaaactgcctgcccggcctggtccccgtccaacg
accaagaaaagggttgaagatgacgacgacatgcatatgctggcgtcatgggcgacctaa

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