Oryzias latipes (Japanese medaka): 101156473
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Entry
101156473 CDS
T02443
Name
(RefSeq) transcriptional repressor CTCF isoform X2
KO
K23195
transcriptional repressor CTCF
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101156473
03036 Chromosome and associated proteins [BR:
ola03036
]
101156473
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101156473
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101156473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
101156473
NCBI-ProteinID:
XP_004086251
LinkDB
All DBs
Position
6:complement(5241179..5253125)
Genome browser
AA seq
833 aa
AA seq
DB search
MDGGSAEGVVDVPSIQAVHSQDAMVADLLQQAAEAGGVVQGQAGVGLEQGHGEQMMVAGQ
TQQQLMDAGVGVAVDGGAGVDMMVMDSLDPTLLQMKTEVMDAAVGASSPSAAVVGGVAGA
AHQATVTTVDQTQIITLQVVNMEEQAALGIGELQLVQVPVSATTVEALQQGTFVDASSIP
KDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEEAEVHAEDEDDEEVGNQLLEEGEEE
PMQPPNNDPSWAKDPDYQPPSGVVKKVKKGKKSRLRYAEGDKDMDVSVYDFEEEQQEGLL
SEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCH
LCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCD
YASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFT
QSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFH
ERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPFGCSQCEKTFRQKQL
LDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHAENCSGEVDDAENGAPTPKKGRRG
RKKKMRSRRDEDDSDEDQLEPDDEDEAEEEEEASLLLEEDEPESLELDQAPAAVPVPAPE
EPPVKRKRGRPPKNAPKVPAPSKPVRTPSKTSSAAAVIQVEDESTGAVDIIVKKEEADGA
AEAPLQGGVALAVEDAAMDAEGAETVELADGEETVAAANGDLTPEMILSMMDR
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgggtcagctgagggcgtggtggatgtcccgtccattcaggctgttcacagc
caggatgccatggtggccgacctcctccagcaagctgcagaggccgggggggtggtgcag
gggcaggctggagttgggctagaacaaggtcatggggagcaaatgatggtggcagggcag
acccagcagcagctcatggatgctggggtgggggttgctgtggacggtggagcgggcgtg
gacatgatggtgatggactcgttggatcccaccctgctgcagatgaagacggaggtgatg
gatgctgccgtgggggcgtcctccccctcagcagccgtggttgggggcgtggcaggtgct
gctcatcaagccacagtgacaacggtggaccagacgcagatcataactctgcaggtggtg
aacatggaggagcaggcggcgctggggatcggggagctgcagctggtccaggtgcctgtg
tctgccaccaccgtggaggccctgcagcaaggaacctttgtagacgccagttcaattcca
aaagatggagacccagtcatctgtcacacgctgcctcttcctgagggcttccaggtagtc
aaggtgggagccaacggggaggtggagacagtggagcaggaggaggaagctgaagtccac
gctgaagatgaagatgatgaggaggtgggcaaccagctgctggaagagggggaggaggag
cccatgcagcctccaaacaatgacccaagctgggctaaagaccctgactaccagcctcca
tctggggtggtcaagaaggttaaaaaggggaaaaagagtcgcctgcgttatgctgagggc
gataaggacatggatgtcagcgtgtacgactttgaagaggagcagcaggagggccttctg
tcagaggttaacgctgagaaggtggtgggcaacatgaagccgcccaaacccaccaagatc
aagaaaaaaggtgtgaagaagacgttccagtgcgagctgtgcagctacacgtgcccacgc
cgctccaacctggaccgccacatgaagagccacacggacgagaggcctcacaagtgtcac
ctgtgcgggagagccttccggacggtcaccctgctgagaaaccacctcaacacgcacaca
ggaacacggccgcacaaatgcacggactgtgacatggcctttgtgaccagcggggagctg
gttcgtcacagacgctacaaacacacgcatgagaaacccttcaagtgctccatgtgtgac
tatgccagtgtggaggtgagcaaactgaagcgccacatccgatcccacactggcgagcgg
cccttccagtgcagcctctgcagctacgccagcagagacacgtacaagctgaagagacac
atgaggacgcactccggggagaaaccctacgagtgctacatctgccacgcccgcttcacc
cagagcggaaccatgaagatgcacatcctgcagaagcacacagagaatgtggccaagttc
cattgtcctcactgcgacacggtcatcgctcgcaaaagtgacctgggggtccatcttcga
aagcagcactcgtttattgagactggaaagaagtgccgctactgcgacgccgttttccac
gagcgctacgctctgatccagcaccaaaagtcccacaagaacgagaagaggttcaaatgc
gacatgtgtgactactgctgcagacaggagcggcacatggtgatgcaccgtcggacccac
accggagagaagccgtttggctgcagccagtgtgagaagaccttcaggcagaagcagctg
ctggacatgcacttcaagcgttaccacgaccccaacttcgtccccaccgcctttgtttgc
cccaagtgcagcaagacgttcactcggaggaacaccatggcgaggcatgctgagaactgc
agtggggaggtggacgatgcagaaaacggagcccccacccccaaaaaaggcaggaggggc
cgaaagaaaaagatgaggagccggagagatgaggacgacagtgatgaggaccagctggag
ccggacgacgaggacgaggctgaggaggaggaggaggcttccctgctactggaggaagat
gagccagagagcttggaactggaccaagccccagctgccgtcccagtcccggcgcccgaa
gaaccgccggtcaagagaaaacgaggccgaccccctaagaacgcccccaaagtccccgct
cccagcaagcccgtcagaacgccgagcaaaacatcctctgccgctgccgtcattcaggtg
gaggatgagagcaccggggccgtggacattattgtaaagaaggaggaggccgacggcgct
gcggaggctccccttcaggggggcgtggctctggctgtggaggatgccgccatggacgca
gagggggcggagactgtggagctggctgacggcgaggaaacggtggcagctgccaatgga
gacctgacgccggagatgatcctgagcatgatggaccggtga
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