Oryzias latipes (Japanese medaka): 101156548
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Entry
101156548 CDS
T02443
Symbol
nkx6-1
Name
(RefSeq) homeobox protein Nkx-6.1
KO
K08030
homeobox protein Nkx-6.1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101156548 (nkx6-1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
101156548 (nkx6-1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
101156548
NCBI-ProteinID:
XP_004084225
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All DBs
Position
12:454592..456604
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AA seq
414 aa
AA seq
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MSPFRWMGNVTIRRSNPSADSPRLLHPPNSARPSLKVWTRSPDSSLGPGAGCRTDQNAAR
TGAGPGPGLSAEPFGTCGDVRPGAPAAVVSPPPVMLAVGPMDGSRQSAFLLSSPPLAALH
SMAEMKTPLYPAYPLSSPGPASSTSPATTSPNPGGMAASSPSIKSSSSLSSGLGSPQQCS
SATPHGINDILNRPSAGGAAAPAAGILSGLPRFSSLSPPPPPGLYFSPGAAAVAVARYPK
PLAELPGRTPIFWPGVMQSPHWRDARFACSPHQNSVLLDKDGKRKHTRPTFSGQQIFALE
KTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMASAKKKQDSETER
LKGASEHEHEHEDEDEDYNKPLDPNSDDEKITQLLRKHKPGPALHALTSETDSS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagccctttccgctggatgggcaacgtcacgatccgtcggtccaatccttccgcagac
tctccccgcctcctccacccccccaattctgcgcgtccctccctgaaagtttggacccgc
agcccggactcgtctttaggacccggcgcaggctgcaggacggatcagaacgcggcccgg
accggagccggacctggacccggtctgtcagcggagcctttcggaacctgcggggatgtt
cggcccggagcgccggccgcggtagtgtccccccctcccgtgatgttagctgtgggtccg
atggacgggtcccgacagagcgccttcctcctcagcagcccccccctggccgctctgcac
agcatggcggagatgaagacccccctgtacccggcctacccgctgtcctcccccggaccc
gcctcctccacctccccggccaccacctccccgaaccccggcggcatggcggcgtcctcc
cccagcatcaagagctcctcctcgctgtcgtccggcctcggctccccccagcagtgctcc
tccgccaccccccacggcatcaacgacatcctcaaccggccgtccgccggtggcgccgcc
gcccctgcggcggggatcctgtcgggactgccccggttcagcagcctcagccctccgccc
ccccccggactgtacttcagccctggagcggcggcggtggcggtggcccggtacccaaag
ccgctggcggagttgccgggccgaaccccgatcttctggccgggagtcatgcagagtccg
cactggcgggacgcccggttcgcgtgctccccccatcagaactcggttctgctggacaag
gacgggaagcggaagcacacgcggcccaccttctcgggacagcagatcttcgcgctggaa
aagacgttcgagcagaccaagtacctcgcggggcccgagcgcgcgcgcctggcgtactcc
ctggggatgacggagagccaggtgaaggtgtggttccagaaccggaggaccaagtggcgg
aagaagcacgcggcggagatggcctcggccaagaagaagcaggactctgagacggagcgg
ctgaagggcgcgtccgagcacgagcacgagcacgaggacgaggacgaggactacaacaag
cctctggacccgaactcggacgacgagaagatcacgcagctgctgaggaagcacaaaccg
gggcccgcgctgcacgcgctcacgtcggagacagacagctcgtga
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