Oryzias latipes (Japanese medaka): 101156554
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Entry
101156554 CDS
T02443
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101156554 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101156554 (gtf2f1)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
101156554 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
101156554
NCBI-ProteinID:
XP_004085475
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All DBs
Position
8:14107681..14112503
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AA seq
533 aa
AA seq
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MTSLGGSSASTTEYTVRVPKNTSKKYNIMAFNSGDKVNCSAWTQARMERDLSARRIYGEE
ELPEGGAGSEFGKKQREEARRKKYGIVTREFKVEDQPWILKVNGKAGKRFKGIKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPVAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGEEDDDDADKPGKKKKKGGGKGGDLRIHDLDEDLEMSSDDSDNSMGDDGENKA
KAKKDKAKGKAKKKKQKSNEKDALEDSDDGDYEGLEVDYMSDESSSEEELTKEKPNKQEE
HPKGIDEASESEEESEEENQNEEEAKEEEEEEEGKKTPVQVEKKKKKDSSGESETSDDSD
IEGETASALFMAKKRTPPKRAAGRGSAGSSRTSSRPGTPSIDSGSTSSTLRAAASKLEQG
KRPPQGPSADSPAAKRLKMEPSSQSPGPSGKSTPQPSSGKSTPSSSDVQLTEEAVRRYLI
RKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINDKMHFYLTE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacatctctggggggcagcagtgcttcgactacagaatacacagtgagagtccccaaa
aatacaagcaagaagtacaacatcatggcttttaattctggagacaaagtcaactgttcg
gcctggacacaggctcgcatggaacgcgacctgagtgctcggcgaatatatggcgaggag
gagttaccagagggaggggcagggagcgagtttggcaaaaagcagcgcgaggaagcgcgg
cggaagaagtatggcattgtgaccagagagttcaaggtggaggatcagccgtggatttta
aaggtcaacggaaaagcaggaaaaaggttcaaaggtataaagaagggcggcgtgacagaa
aatgcatcctactacatctttacgcagtgtcctgatggagccttcgaggctttccccgtt
cacggctggtacaacttcacgccggtggcgaagcaccgaactctgactgcagaggaagct
gaggaggagtggggcaggcggaacaaggtggtgaatcacttcagcatcatgcttcagaga
cgcctccgggaacaggagcggggcgaggaggatgacgatgacgccgacaaacccggaaag
aagaaaaagaaagggggcgggaagggtggagatttgcgaattcatgatctggatgaagac
ctggagatgagcagcgacgacagcgacaacagcatgggagatgatggagaaaacaaagca
aaggcaaagaaagacaaagccaaagggaaagcaaagaaaaagaaacaaaagagcaatgag
aaggatgccctggaagacagcgatgatggagactatgagggtctagaggtggattatatg
tcagatgaaagcagttcagaggaggagctaacaaaggagaagccaaacaaacaggaggag
caccctaaaggcatagatgaggcatctgagagcgaggaggagagcgaggaggagaaccag
aatgaagaagaagcaaaggaggaagaagaggaggaggaaggaaagaagactccggttcag
gtggaaaagaaaaagaaaaaagacagcagcggggagtcagagacttcggacgacagcgac
attgagggagagacggcctctgctctgttcatggcgaagaagcgcacgccccccaaacgt
gcggcaggccgcggctctgcaggcagctccaggaccagcagccgtccagggacgccctcc
atcgactccggctccacctccagcacgctccgggcagccgccagcaaactagagcaagga
aagagaccgccacagggtcctagtgccgactcgccggcggccaaaaggcttaaaatggag
cccagctctcagagcccaggaccctcagggaagagtacacctcaaccttcatcaggcaaa
tccacccctagttcaagtgatgtgcagctaaccgaagaagcggttcggcgctacttgatc
cgcaaaccgatgaccaccaaagacctgctgaagaagttccagaccaagcgtacgggtttg
agcagcgagcagaccgtcaacgtgctggcgcagatcctcaagcgtctcaacccggagcgc
aagaacatcaacgacaagatgcacttctacctcaccgaatga
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