Oryzias latipes (Japanese medaka): 101156596
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Entry
101156596 CDS
T02443
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03410
Base excision repair
ola04140
Autophagy - animal
ola04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101156596
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101156596
09143 Cell growth and death
04217 Necroptosis
101156596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101156596
03400 DNA repair and recombination proteins [BR:
ola03400
]
101156596
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101156596
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
101156596
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
101156596
MMR (mismatch excision repair)
Other MMR factors
101156596
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
101156596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Ets
Motif
Other DBs
NCBI-GeneID:
101156596
NCBI-ProteinID:
XP_004075350
UniProt:
H2LG42
LinkDB
All DBs
Position
13:8849049..8851531
Genome browser
AA seq
194 aa
AA seq
DB search
MVKDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKVRYEREMKNYVPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSESPGLS
IGDTAKKLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYRTKGKVDSESASAADEEEE
GEEEEEEEEEDEDD
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggatccaaaaaagccaaggggcaaaatgtcctcatatgcttactttgtgcaa
acatgccgagaggagcacaagaagaaacaccctgatgcttcagtcaatttttcggaattc
tccaagaaatgctctgagcgatggaagacaatgtcacctaaagagaaaggcaagtttgaa
gatatggccaaacaagacaaggtgcgttatgagagagaaatgaagaattatgtacccccc
aaggggcagaagaagaaacgattcaaggacccaaatgctccaaagagaccgccgtctgct
ttctttcttttctgtgcagattttcgccccaaaataaaaagtgaaagccccggactttcc
attggcgacaccgccaagaaactcggggagatgtggaacagctcgtctgcggaggagaag
cagccgtacgagaagaaggcggccaaattgaaggagaaatatgacaaagacatcgttgct
taccgtacaaaaggcaaagtcgattcagaatcagcttctgccgctgatgaagaggaagaa
ggagaggaggaggaggaggaagaggaagaagatgaggatgattag
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