Oryzias latipes (Japanese medaka): 101156600
Help
Entry
101156600 CDS
T02443
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101156600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101156600
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
ROBO family
101156600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
Unc5_NetrinR_N
Fn3_Dep-1_3rd
Ig_PDGFR_d4
fn3_2
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
101156600
NCBI-ProteinID:
XP_023818341
UniProt:
H2M2F5
LinkDB
All DBs
Position
14:17699287..17818695
Genome browser
AA seq
1572 aa
AA seq
DB search
MLAVPVVLVVSLLSVSKTEQSWSMVISSDAEKHQGSREVSTKSPQSKTEPNQDSNLGYKG
SRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPPPTVEWYKDGERVETDRDNPRSH
RMLLPSGSLFFLRIIHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQNPVD
VMVAVGEPAVLECQPPRGHPEPTISWRKDGANLDDRDERITIRSGKLMITNTLKTDAGKY
ICVATNMLGERESETAELTVLERPTFVKRPSSVVVLTDESVEFHCVVHGDPVPIVRWRRD
DSDLPKGRFEVLVDHTLIIRQVTSSDEGSYTCVVENMVGKSEASASLTVHVPPAFATHPR
NQVVSVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPQPFSRLSVSQMGSLTITDV
QRSDAGFYSCQALNIAGSVITKALLEVSDAGSDYLPPIIKQGPSNQTVLVDSIVELGCQT
AGTPPPTVHWKKDGVVLSPADSRTSLTETGSLKIYHTELGDSGMYTCTASNPGGEASWTA
FLQVQEFGVGKSDHPVENNMIPTAPSKPEVTNISQTSVTLSWKSSPDKEKLPTSYLIEAF
SYTLGNRWVTLAEHVRAETFVLRNLKPGAVYLFMIRAVNTYGLSDPSPISDSVRTQDSTA
IIKGVDHRHIQNELGDVVIHLHMPTVLSGSAVRLQWMVEQQSPYIQGFKVLYRLSAEHGQ
PEVQWSVLEIHGSQEDSMIISHLKKGSIYEFKVRPFFDEFQGADSEVKVVRTLEDVPRRA
PQGVTVTKSDANATAILVSWKPPPEAGEDGFIQEYRIWCLGNESRYHVNQSVDSSTFSVL
ISSLAPGIRYSVEVAASNSAGLGVKSQAAFFQFDSSGQMMVLSDRRDALSQISDVVKQPA
FIAGIGATCWFVLMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESACSA
GRPGPLSMGEPLNQLWLPDNWPNASANHLDCAINCCNNGNGTSDSNMTTYSRPADCIANY
GNHPDSKQGGQLGTAIYSDINLSNKLSEIKTINNLGYVSPGGDSTGTYEPIPYATTQLIQ
ASIKNKGASLSEPLDIPCWKQPPNLPPITKEMAAQMQHSMAEQNSKDLQGSEGGVIHPKL
MLNHTHNHSTGSSSHSSDRSSSNTSGSQIQRKGVRAPKASKHNGVSWGEQLSSVQADAWD
CDEYSLPMERSFDPEEKTQDAPSPLVRALTPTEGTCCQPPASSSQGGLSNGLHGRDECFT
HTYSSIPLCVDTDGQEENEEEEVGDGENVGEDPYSQPYNHQKHKHQLQLLSSHKLLLHGQ
DQTPTSSIGDLDRSVTGSMVNSWGSASEDNISSGRSSVVSTSEGSFFTDGDFNQTAASSR
DIVGIRVGRYCEESGRRQQRASSPMSTDSNMSPAITHKRPRRHKQSHSGQQDCKPTDVFS
DDTCMPLTFANQMCHGDNKVRGATLPRMGSGESRGRRGSTGTHRVREGTFEQSKGQDRHK
ISSAVKGNNKNRQHSEFADVPLYSRPSFPPGHRELGSNALSFQSCGNSRTKPAELKAPTV
QVEEFLKSQEAL
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgttcctgttgtcttggtcgtcagcctgctcagtgtcagcaaaacggagcag
agctggagcatggtcatctcatcagatgcagaaaaacatcaaggaagccgagaggtgtcc
accaaatcgccccaatccaaaacagaacctaatcaagacagcaaccttggatacaaagga
tcccgtcttcgtcaggaagacttccctccccgcattgtggagcacccgtcagacctaatt
gtgtctaaaggggagccggctactctcaactgcaaggctgagggccgtcccccgccgacg
gtagaatggtacaaagatggagagcgcgtggaaacagacagggacaacccccgctcccat
cgtatgcttctacccagcggatcacttttcttcctgcggatcatccacggaagacgaagc
aagccagatgatggtagctatgtgtgtgttgcgcggaactatctgggccaagccatcagt
cacaatgcatccctggaagtggccattttacgagatgacttcaggcagaaccccgttgac
gttatggttgcagtaggtgagcctgctgtactggagtgccagcccccccgcgggcaccct
gaacccacaatctcatggaggaaagatggtgccaacttagatgacagagatgaacgcatc
acgattcgtagtgggaagcttatgatcaccaacactttgaagacggatgctggaaagtac
atttgcgttgctacaaacatgctgggagaaagagaaagcgagactgccgaactcacagtg
ttagagcgaccgacctttgtgaaacggcccagcagtgtggtggtgctgacagacgagagc
gtggagttccactgtgtggttcacggagaccctgttcctattgtccgctggaggagagat
gattcagacttaccaaagggaagatttgaagttctggtggaccatactttaattattcgc
caagtcacttcttctgacgaggggtcttatacatgcgtggtggagaacatggttgggaag
tctgaagcatctgcctcgctcacagttcatgtgccccctgcttttgccacgcaccccagg
aaccaggtggtgtcagtgggcaggacggtcacctttcagtgtgaggccactggtaacccg
caacctgctattttctggcaacgagagggcagcgagagccttctgttctcctaccagccg
ccgcagcccttcagccggctgtccgtgtctcagatgggcagtttgaccattactgatgtt
cagcgctctgatgctggcttctacagctgccaggctcttaacattgccggtagtgttata
actaaagcactacttgaggtttcagatgctgggtcagactacctacctcccatcattaaa
caaggccccagcaatcagactgtccttgtggacagcattgtggaactgggttgccaaact
gctggcactccaccccccacagttcactggaaaaaggatggggtggtgctttctcctgca
gactccaggacatccctgactgaaacaggatctctgaaaatttaccatactgagctggga
gattcgggcatgtatacttgcactgcctcaaacccaggtggggaggcttcctggacagca
ttcttacaagtacaagaatttggggttgggaagtctgatcaccccgtggaaaataatatg
attccgactgctccgtccaaaccggaagtcactaacatcagccagacatcagtgacgttg
tcgtggaagtctagtcctgataaggagaaactacctacatcttacctcatcgaggcattc
agttacactttaggtaacagatgggtgaccctagcagagcatgtgagagcagagactttt
gtcctgaggaacctgaagcctggagccgtctacctcttcatgatccgagcagtgaatact
tacggcctcagcgatcccagtccaatatcagattccgtcagaacacaggacagcactgct
attataaagggggtggaccatcgtcacatccagaacgaactaggagacgtcgtaatccac
ctgcacatgcccacagttctgtcgggatctgctgtcagactgcagtggatggtagaacag
cagtccccgtacatccagggcttcaaggtgctttacagattgtccgccgagcatggccag
cccgaggtgcagtggagtgtcctggagattcacggctcgcaggaggacagcatgatcatt
agtcatctaaaaaaaggatccatctacgagttcaaagtgcgccccttctttgacgaattc
cagggagctgacagtgaggtgaaggtggtcaggacactggaagacgtcccgagaagagca
cctcagggggtcacagtgacaaagagtgatgccaatgctactgctatccttgtttcctgg
aaaccacctccagaggcaggagaagatggctttattcaggagtacaggatctggtgcctg
ggtaatgagagccgctaccatgtgaaccagtctgtggacagttccaccttctctgtactt
atttccagtctggcaccaggaattcgctacagtgtagaggttgcagccagcaacagtgct
gggctgggagtcaagagccaagcagctttctttcagtttgactcttcaggacagatgatg
gtcctcagtgacaggagagatgctttatcacagatctcagatgtggtgaagcagccagct
tttatagctggcattggcgccacctgctggtttgttctcatgattttcagtgtgtggctc
tacaggcaccgcaagaagaggagcggtctcagcagcacatacactggaatccgcaaagtc
ccatcattcacctttacaccaacagttgcatatcaaagaggagaatctgcgtgcagcgct
ggcagacctggccctctcagcatgggtgaaccactaaaccagctgtggctgccagacaat
tggcccaatgcaagtgccaatcatttggattgcgccatcaattgctgcaataacggcaat
ggcaccagtgacagcaacatgaccacgtacagtcggccagctgactgcatcgccaactat
ggaaaccatccagacagcaaacaagggggccagcttgggacagccatctacagtgacatc
aacctttccaacaagcttagtgagatcaaaacaatcaacaatttgggctacgtgagccca
ggaggagattccaccggcacatatgagcccattccatacgccacaacacagctcattcag
gccagcattaagaacaagggggcgtctttatcggaacctcttgatataccatgctggaaa
caaccccccaacctgcctccaatcaccaaggagatggctgcacagatgcagcacagcatg
gcggagcagaacagtaaagatctgcagggaagcgaaggcggcgtgatccacccaaagctg
atgctgaaccacacacacaatcacagcacaggaagctccagtcacagctcagacagaagc
agcagcaacacctcagggagccaaattcaaaggaaaggagtcagggctccaaaggcctcg
aaacataacggggttagctggggggaacagctgtcctctgttcaggctgatgcctgggac
tgcgatgaatacagtcttcccatggagaggagctttgatccagaggagaaaacacaagac
gctccatctccactagtgagagccttaacgcctactgaagggacctgctgccaaccacct
gcttcatcctcacagggaggcctgagcaatggcctgcacggtagagacgaatgcttcaca
cacacctacagctccataccgctctgcgtggacactgatggacaagaagagaatgaagaa
gaagaggtcggggacggggaaaatgttggagaagatccttacagccaaccctacaatcac
cagaagcacaaacaccagctgcagctcctctcgtcgcacaagctgcttctccacgggcag
gatcagaccccaacctctagcataggggacctggacagatcagtcacggggtccatggtt
aacagctggggctcagcgtcagaggacaacatctcatcaggcaggtccagtgttgtcagc
acttcagagggatccttttttacggatggtgacttcaaccagacagcggcttcctcgagg
gatattgtaggcatccgtgtgggcagatattgtgaggagtcaggccggaggcagcagaga
gcgagtagccccatgtcaacagacagcaacatgagtcctgcaataacacataaaaggccc
cggaggcataaacagagccattctggtcagcaggattgcaaacccacagatgtcttcagt
gacgacacttgcatgcctctcactttcgccaaccagatgtgccacggggacaacaaggtg
aggggggccacgctccctcggatgggctctggggagtcccggggtagacgaggaagcact
gggactcacagggtcagggaaggtacatttgagcagagcaaaggccaggacaggcacaag
atttcatcagcagtgaaaggaaacaacaaaaaccgacagcactcagaatttgccgacgtt
cctctgtatagtcgtccttcttttccaccaggtcatagagagctgggctctaatgcgttg
agctttcagtcatgtgggaactcaaggaccaaacctgcagagctgaaggcccctacagta
caggtggaagagttcctgaaaagccaagaagcactgtga
DBGET
integrated database retrieval system