KEGG   Oryzias latipes (Japanese medaka): 101156600
Entry
101156600         CDS       T02443                                 
Name
(RefSeq) roundabout homolog 1 isoform X1
  KO
K06753  roundabout, axon guidance receptor 1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    101156600
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ola04515]
    101156600
Cell adhesion molecules [BR:ola04515]
 Immunoglobulin superfamily
  ROBO family
   101156600
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 V-set fn3 C2-set_2 FN3_DSCAM-DSCAML_C Pur_ac_phosph_N Sp38 Unc5_NetrinR_N Fn3_Dep-1_3rd Ig_PDGFR_d4 fn3_2 Ig_J_second
Other DBs
NCBI-GeneID: 101156600
NCBI-ProteinID: XP_023818341
UniProt: H2M2F5
LinkDB
Position
14:17699287..17818695
AA seq 1572 aa
MLAVPVVLVVSLLSVSKTEQSWSMVISSDAEKHQGSREVSTKSPQSKTEPNQDSNLGYKG
SRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPPPTVEWYKDGERVETDRDNPRSH
RMLLPSGSLFFLRIIHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQNPVD
VMVAVGEPAVLECQPPRGHPEPTISWRKDGANLDDRDERITIRSGKLMITNTLKTDAGKY
ICVATNMLGERESETAELTVLERPTFVKRPSSVVVLTDESVEFHCVVHGDPVPIVRWRRD
DSDLPKGRFEVLVDHTLIIRQVTSSDEGSYTCVVENMVGKSEASASLTVHVPPAFATHPR
NQVVSVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPQPFSRLSVSQMGSLTITDV
QRSDAGFYSCQALNIAGSVITKALLEVSDAGSDYLPPIIKQGPSNQTVLVDSIVELGCQT
AGTPPPTVHWKKDGVVLSPADSRTSLTETGSLKIYHTELGDSGMYTCTASNPGGEASWTA
FLQVQEFGVGKSDHPVENNMIPTAPSKPEVTNISQTSVTLSWKSSPDKEKLPTSYLIEAF
SYTLGNRWVTLAEHVRAETFVLRNLKPGAVYLFMIRAVNTYGLSDPSPISDSVRTQDSTA
IIKGVDHRHIQNELGDVVIHLHMPTVLSGSAVRLQWMVEQQSPYIQGFKVLYRLSAEHGQ
PEVQWSVLEIHGSQEDSMIISHLKKGSIYEFKVRPFFDEFQGADSEVKVVRTLEDVPRRA
PQGVTVTKSDANATAILVSWKPPPEAGEDGFIQEYRIWCLGNESRYHVNQSVDSSTFSVL
ISSLAPGIRYSVEVAASNSAGLGVKSQAAFFQFDSSGQMMVLSDRRDALSQISDVVKQPA
FIAGIGATCWFVLMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESACSA
GRPGPLSMGEPLNQLWLPDNWPNASANHLDCAINCCNNGNGTSDSNMTTYSRPADCIANY
GNHPDSKQGGQLGTAIYSDINLSNKLSEIKTINNLGYVSPGGDSTGTYEPIPYATTQLIQ
ASIKNKGASLSEPLDIPCWKQPPNLPPITKEMAAQMQHSMAEQNSKDLQGSEGGVIHPKL
MLNHTHNHSTGSSSHSSDRSSSNTSGSQIQRKGVRAPKASKHNGVSWGEQLSSVQADAWD
CDEYSLPMERSFDPEEKTQDAPSPLVRALTPTEGTCCQPPASSSQGGLSNGLHGRDECFT
HTYSSIPLCVDTDGQEENEEEEVGDGENVGEDPYSQPYNHQKHKHQLQLLSSHKLLLHGQ
DQTPTSSIGDLDRSVTGSMVNSWGSASEDNISSGRSSVVSTSEGSFFTDGDFNQTAASSR
DIVGIRVGRYCEESGRRQQRASSPMSTDSNMSPAITHKRPRRHKQSHSGQQDCKPTDVFS
DDTCMPLTFANQMCHGDNKVRGATLPRMGSGESRGRRGSTGTHRVREGTFEQSKGQDRHK
ISSAVKGNNKNRQHSEFADVPLYSRPSFPPGHRELGSNALSFQSCGNSRTKPAELKAPTV
QVEEFLKSQEAL
NT seq 4719 nt   +upstreamnt  +downstreamnt
atgctggctgttcctgttgtcttggtcgtcagcctgctcagtgtcagcaaaacggagcag
agctggagcatggtcatctcatcagatgcagaaaaacatcaaggaagccgagaggtgtcc
accaaatcgccccaatccaaaacagaacctaatcaagacagcaaccttggatacaaagga
tcccgtcttcgtcaggaagacttccctccccgcattgtggagcacccgtcagacctaatt
gtgtctaaaggggagccggctactctcaactgcaaggctgagggccgtcccccgccgacg
gtagaatggtacaaagatggagagcgcgtggaaacagacagggacaacccccgctcccat
cgtatgcttctacccagcggatcacttttcttcctgcggatcatccacggaagacgaagc
aagccagatgatggtagctatgtgtgtgttgcgcggaactatctgggccaagccatcagt
cacaatgcatccctggaagtggccattttacgagatgacttcaggcagaaccccgttgac
gttatggttgcagtaggtgagcctgctgtactggagtgccagcccccccgcgggcaccct
gaacccacaatctcatggaggaaagatggtgccaacttagatgacagagatgaacgcatc
acgattcgtagtgggaagcttatgatcaccaacactttgaagacggatgctggaaagtac
atttgcgttgctacaaacatgctgggagaaagagaaagcgagactgccgaactcacagtg
ttagagcgaccgacctttgtgaaacggcccagcagtgtggtggtgctgacagacgagagc
gtggagttccactgtgtggttcacggagaccctgttcctattgtccgctggaggagagat
gattcagacttaccaaagggaagatttgaagttctggtggaccatactttaattattcgc
caagtcacttcttctgacgaggggtcttatacatgcgtggtggagaacatggttgggaag
tctgaagcatctgcctcgctcacagttcatgtgccccctgcttttgccacgcaccccagg
aaccaggtggtgtcagtgggcaggacggtcacctttcagtgtgaggccactggtaacccg
caacctgctattttctggcaacgagagggcagcgagagccttctgttctcctaccagccg
ccgcagcccttcagccggctgtccgtgtctcagatgggcagtttgaccattactgatgtt
cagcgctctgatgctggcttctacagctgccaggctcttaacattgccggtagtgttata
actaaagcactacttgaggtttcagatgctgggtcagactacctacctcccatcattaaa
caaggccccagcaatcagactgtccttgtggacagcattgtggaactgggttgccaaact
gctggcactccaccccccacagttcactggaaaaaggatggggtggtgctttctcctgca
gactccaggacatccctgactgaaacaggatctctgaaaatttaccatactgagctggga
gattcgggcatgtatacttgcactgcctcaaacccaggtggggaggcttcctggacagca
ttcttacaagtacaagaatttggggttgggaagtctgatcaccccgtggaaaataatatg
attccgactgctccgtccaaaccggaagtcactaacatcagccagacatcagtgacgttg
tcgtggaagtctagtcctgataaggagaaactacctacatcttacctcatcgaggcattc
agttacactttaggtaacagatgggtgaccctagcagagcatgtgagagcagagactttt
gtcctgaggaacctgaagcctggagccgtctacctcttcatgatccgagcagtgaatact
tacggcctcagcgatcccagtccaatatcagattccgtcagaacacaggacagcactgct
attataaagggggtggaccatcgtcacatccagaacgaactaggagacgtcgtaatccac
ctgcacatgcccacagttctgtcgggatctgctgtcagactgcagtggatggtagaacag
cagtccccgtacatccagggcttcaaggtgctttacagattgtccgccgagcatggccag
cccgaggtgcagtggagtgtcctggagattcacggctcgcaggaggacagcatgatcatt
agtcatctaaaaaaaggatccatctacgagttcaaagtgcgccccttctttgacgaattc
cagggagctgacagtgaggtgaaggtggtcaggacactggaagacgtcccgagaagagca
cctcagggggtcacagtgacaaagagtgatgccaatgctactgctatccttgtttcctgg
aaaccacctccagaggcaggagaagatggctttattcaggagtacaggatctggtgcctg
ggtaatgagagccgctaccatgtgaaccagtctgtggacagttccaccttctctgtactt
atttccagtctggcaccaggaattcgctacagtgtagaggttgcagccagcaacagtgct
gggctgggagtcaagagccaagcagctttctttcagtttgactcttcaggacagatgatg
gtcctcagtgacaggagagatgctttatcacagatctcagatgtggtgaagcagccagct
tttatagctggcattggcgccacctgctggtttgttctcatgattttcagtgtgtggctc
tacaggcaccgcaagaagaggagcggtctcagcagcacatacactggaatccgcaaagtc
ccatcattcacctttacaccaacagttgcatatcaaagaggagaatctgcgtgcagcgct
ggcagacctggccctctcagcatgggtgaaccactaaaccagctgtggctgccagacaat
tggcccaatgcaagtgccaatcatttggattgcgccatcaattgctgcaataacggcaat
ggcaccagtgacagcaacatgaccacgtacagtcggccagctgactgcatcgccaactat
ggaaaccatccagacagcaaacaagggggccagcttgggacagccatctacagtgacatc
aacctttccaacaagcttagtgagatcaaaacaatcaacaatttgggctacgtgagccca
ggaggagattccaccggcacatatgagcccattccatacgccacaacacagctcattcag
gccagcattaagaacaagggggcgtctttatcggaacctcttgatataccatgctggaaa
caaccccccaacctgcctccaatcaccaaggagatggctgcacagatgcagcacagcatg
gcggagcagaacagtaaagatctgcagggaagcgaaggcggcgtgatccacccaaagctg
atgctgaaccacacacacaatcacagcacaggaagctccagtcacagctcagacagaagc
agcagcaacacctcagggagccaaattcaaaggaaaggagtcagggctccaaaggcctcg
aaacataacggggttagctggggggaacagctgtcctctgttcaggctgatgcctgggac
tgcgatgaatacagtcttcccatggagaggagctttgatccagaggagaaaacacaagac
gctccatctccactagtgagagccttaacgcctactgaagggacctgctgccaaccacct
gcttcatcctcacagggaggcctgagcaatggcctgcacggtagagacgaatgcttcaca
cacacctacagctccataccgctctgcgtggacactgatggacaagaagagaatgaagaa
gaagaggtcggggacggggaaaatgttggagaagatccttacagccaaccctacaatcac
cagaagcacaaacaccagctgcagctcctctcgtcgcacaagctgcttctccacgggcag
gatcagaccccaacctctagcataggggacctggacagatcagtcacggggtccatggtt
aacagctggggctcagcgtcagaggacaacatctcatcaggcaggtccagtgttgtcagc
acttcagagggatccttttttacggatggtgacttcaaccagacagcggcttcctcgagg
gatattgtaggcatccgtgtgggcagatattgtgaggagtcaggccggaggcagcagaga
gcgagtagccccatgtcaacagacagcaacatgagtcctgcaataacacataaaaggccc
cggaggcataaacagagccattctggtcagcaggattgcaaacccacagatgtcttcagt
gacgacacttgcatgcctctcactttcgccaaccagatgtgccacggggacaacaaggtg
aggggggccacgctccctcggatgggctctggggagtcccggggtagacgaggaagcact
gggactcacagggtcagggaaggtacatttgagcagagcaaaggccaggacaggcacaag
atttcatcagcagtgaaaggaaacaacaaaaaccgacagcactcagaatttgccgacgtt
cctctgtatagtcgtccttcttttccaccaggtcatagagagctgggctctaatgcgttg
agctttcagtcatgtgggaactcaaggaccaaacctgcagagctgaaggcccctacagta
caggtggaagagttcctgaaaagccaagaagcactgtga

DBGET integrated database retrieval system