Oryzias latipes (Japanese medaka): 101156605
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Entry
101156605 CDS
T02443
Symbol
scap
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101156605 (scap)
Membrane trafficking [BR:
ola04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
101156605 (scap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
Patched
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
101156605
NCBI-ProteinID:
XP_023820029
UniProt:
A0A3B3HKK1
LinkDB
All DBs
Position
16:complement(27599418..27646987)
Genome browser
AA seq
1355 aa
AA seq
DB search
MFPSLPGAKAEQLYSAAEPRRELCVNQKAQIRLKKPSAASFRGHKQVRSRERNWSLISRS
LDATQRNVLGRPVLSNGRELTTPTKMTLREQLRAKISAAFYHHGLLCASYPVPIILFTSA
SILTCCYPLLKLPLPGTGPVEFTTGVRDYSVPSHEPHGDQGERPDWYRGPPVAYIQQVLV
KAAVSPWDSSLVPVDVFRSPLGQVFRLLEEIRNHVYSDSSGVRSLESLCLQVTDLFPGLR
RMQTVLPEHGCLLVSPGNYWQNQRELFDSDPDLFKTIQKHEPKGLHTSATLRDLLFGVPG
KYSGVSHYNKKRVVTYTITVVLVSYDARFLNSLRARLKQLHPSANCSLREDHMVHVHFKE
EIGIAELIPLVTTYIILFAYIYFSTRKIDMVRSKWGLALAAVVTVLSSLLMSVGLCTLFG
LTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMAT
ELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMFFFTTVLSIDIRRMELADLNRRLPA
EASLPQPKPVPLRTREAPPPPRPLPHTITLQTPAFRNLRLPKRLRVVYFLARTRLAQRII
MAGTVIWIGILVYTDPAGIRAYLAAQVSEQSPLGDPGVSGLSPHLAVAPVFAAGDPTSTL
NIHPAPDPTPVPENQSQGHHSSGRALPLPPLSHSVPQITWGAEDEEGWRRLSFRHWPSLF
SYYNITLAKRYISILPVIPVSVHLSPQEAIETRHPHDTRHRPPLIPKVSADLQTDLTLYK
VAALGLAAGVLLVLLLFCLYRVLCPRNYGQNGAAHGRRRRGDLPCDDYGYSPPVSEISPL
LLRGHSMDIECLASDGMLLASCCLAGQIRVWDAQTGDCLTVIPKQWLRRSSSSGCWEQRE
GLDGLSREPEGLGFESRDPSIGGENLSEEDYFPLRRRASPSRVVLFTDQPDLTPLIDTNF
TSQPPSHLSTPPKEGFDYGSLVERAYTEHEPPSPSSYPCASSASSSPSSAAQPQRRLSVG
DGGGASSQERGSGSGTQAAPDWESSVWAMELRGNLIAAGRSSGKLELWDAVEGSLRCRNE
DGVSGITALAFLNNRIVAARLNGSLDFFTVEINKPLALLQYRGAPGQGSMPPSPCYTSED
VISCQLTRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRVYRLEDSCCLFTLQGHSGGITA
IYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTSCVISSGLDDLICI
WDRSTGIKLYSIQQDMGCGASLGVISESLLVTGGQGCVSFWDLNFGDLLQTVYLGQSSDS
QVVRQLLVLDNAAIVCDFGSELSLVYVPSVLEKLD
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtttccatcgctcccgggggcaaaagccgagcagttgtactctgcggctgaaccaaga
agggagctctgtgtcaaccagaaggctcagattagactgaaaaagcccagtgctgcctct
ttcaggggacacaaacaggtgcgatccagagagagaaactggtctctcattagcaggtcc
ctggatgccacgcagcgcaacgtcctcggccgcccagtgctttcaaatggccgggagttg
accacgcccacaaagatgacgctgcgcgagcagctaagagcaaagatctcagcggccttt
taccaccacgggctgctgtgtgcttcttaccccgtacccataatcctcttcacctctgcc
agcatcctcacctgctgctatcccttactgaagcttcccctccccgggacaggtcctgtg
gagttcaccaccggggtccgagactacagcgtcccttctcacgagccccatggagaccaa
ggggagcgacctgactggtaccgaggtcctccggtcgcctacatccagcaggtcctggtg
aaggcagccgtgtctccgtgggacagcagcctggttcctgtggatgtgtttcggtcgcct
ctgggtcaggttttccgccttctggaggaaattcgcaaccatgtttactctgacagctcg
ggtgttcgcagcctggagtcgctgtgcctccaggtgacggacctgtttccggggttacgg
cggatgcagacggtgctgccggagcacggatgcctgctcgtctcgcctggcaactactgg
cagaaccagcgagagctgtttgactcggaccctgaccttttcaagacgatccagaaacat
gagcccaaagggctgcacacctctgcgactttgcgagatctgctctttggcgtccctgga
aagtacagtggggtcagtcattacaacaagaagagggtggtcacttacaccatcaccgtg
gtgctggtcagctatgatgcaaggtttctgaacagtttgagagcccgtctgaagcagctt
catccgtcggccaactgcagcctgagagaagaccacatggttcacgtgcacttcaaggag
gagatcggcattgccgagctcatacctctcgttaccacatacatcatcctgtttgcttac
atctacttctccacacggaagattgacatggtgcggtcaaagtggggcctggcgctggcc
gctgtggtcaccgtcctcagctcgctgctcatgtctgtgggactgtgcacgctgttcgga
ctgacacccactttaaacggaggtgagatctttccttacctggtggtggtgatcggtttg
gagaatgttctggtcctcaccaaatctgtggtttccacccctgtcgacctggaggtcaag
ctccgcattgctcagggtctcagtaatgaaagctggtctatcatgaagaacatggccact
gaactctgcatcattctcatcggatatttcactctggtgccagctatccaggagttttgt
ctttttgccgttgtgggtctcgtctctgactttttcctgcaaatgttcttcttcacaaca
gttctgtctatagatatccgccgcatggagctggccgacctgaaccgccgcctgccagct
gaagcgagtctgcctcaacccaaaccggttccccttcgaacacgtgaggccccccctcct
ccacggccgttgccccacacgatcaccctgcagaccccggcctttaggaacctcaggctc
cccaagaggctgcgtgtggtgtacttcctggcccgcacacgtctggctcagcgaatcatc
atggctggtacggtgatctggatcggaatcctcgtctacaccgacccggctggaatccgg
gcttacctggctgcgcaggtgtcagagcaaagccccctgggagaccccggagtgtccggt
ttatcccctcacctggctgtggctccagttttcgcagccggggaccctaccagtaccttg
aacattcaccctgccccagatccaactcctgtaccagagaatcaatcacagggccaccac
agctctggcagggccctgcctctgcccccgctttcacactcagtccctcaaatcacctgg
ggggccgaagacgaggaagggtggaggaggttgtccttcaggcactggccctcactcttc
agctactataacatcactttagcaaaacggtacatcagcattttacctgtaattccagtc
tctgttcacctgagtccccaggaggccattgagacgcgccaccctcatgacacgagacac
cgccccccgctgatccccaaggtttctgcagatttacagacggatctcacactctacaag
gtggcagctctgggcctggctgcaggggttctgctggttcttctgctcttctgtctctac
cgggttctatgcccccgtaactatggccaaaacggcgccgctcacggacgccggcggcgt
ggagacttgccatgcgatgactacggttattcgccgcctgtcagcgagatctcccccctc
ctgctgagaggccacagtatggacatagaatgtctggccagtgacgggatgctgctggcc
agctgctgcctggctggacagatccgtgtttgggacgcccagactggagactgcctgacc
gtcatcccaaagcagtggctgaggcggagcagcagcagtggctgctgggagcagcgggag
ggcttggatggtttgagcagagaacccgaaggtttgggctttgagagccgagatccctcc
atcggcggggagaacctctcagaggaggactatttcccgctgaggcgccgcgcctcaccc
tccagagtggttcttttcaccgaccagcccgatctgactccgcttattgacaccaacttc
acctcccagcccccttctcacctgtccaccccacccaaagaaggctttgactacggcagt
ctggtggagcgggcgtacacagagcacgagccgccatcgccgtccagctacccctgtgcc
tcctctgcgtcctcatcgccgtcctcagctgctcagcctcagaggagactcagcgttggc
gatggaggcggggcttcgagtcaggagagaggctccggatccgggactcaggcggctcca
gactgggagagctctgtgtgggccatggagctgagaggaaacctgatagctgctgggagg
agcagcggcaaactggaattgtgggatgcagtggaagggtctctgcgatgcagaaatgaa
gacggagtctctggaatcacagctttagccttcttgaacaacagaattgtagcagctcgg
ctcaacggatccttggatttcttcacggtggagatcaacaaacctctggctctgctgcag
tacagaggtgcccccgggcaaggaagcatgcctccgtctccctgttataccagcgaggat
gtgatcagctgccagctgacgcgctccgtgcagtgcgctcaccagaagcccatcacagtg
ctgcgagcggcggcgggccgcgtggtcaccggcagccaggaccacaccgtccgggtctat
cgcctggaggactcgtgctgcctcttcaccctgcagggtcactctggaggaatcacagcc
atctacatcgaccagacaatggttctggcaagtggtgggcaggacggcgccatctgcctg
tgggacgtcctgaccggcagccgcgtcagccacgtttatggtcaccgcggcgacgtcacg
tcactggtctgcactacctcctgcgtcatcagctcaggcctggacgacctcatctgcatc
tgggaccgcagcaccgggatcaaactgtactccatacagcaggacatgggttgtggggcc
agtctgggagtcatctcggagtctttgctggtgacggggggccaaggctgcgtctccttc
tgggacctgaacttcggcgatctgctgcagacggtctacctgggccagagcagcgacagt
caggttgtgcggcagctgctggtgctggacaacgccgccatcgtgtgcgacttcggcagc
gagctgagcctggtctacgtgccgtcggtgctggagaagctggactga
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