Oryzias latipes (Japanese medaka): 101156675
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Entry
101156675 CDS
T02443
Symbol
carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101156675 (carmil1)
Membrane trafficking [BR:
ola04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
101156675 (carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
101156675
NCBI-ProteinID:
XP_023819931
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All DBs
Position
16:complement(10655671..10725334)
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AA seq
1402 aa
AA seq
DB search
MSEDVSEVSKELLESVRDSVGRKVKLSLRKRVKLEVKGDKTENRVLALASYRAYLLTARI
PTKVEHSFNYLEIQGVACNKPTQLCIDYERGSFSLRLPSTEEVNEVVAHIGNCLLRICPG
LPPYKVMKKLSMEPSDRLPPLQTLWENNKLAEPGPCGGFSQMYKCVCDWLGLPYREEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTKLSTKDYKLSADVCEQILR
VVARSSRLEELVLDNAGLKTDFAQKLAAALAYNPSTGLTAINLSNNPLEDRGVSSLGAQF
AKLQIGLKHLNFSRTSLSPKGVNSLCHSLSANPSIPASLVHLDVSGNMLRGDDMQHFYNF
LGQPNSLTTLDLSNTDCSLDQVCSALLRGSVQHLSVLNVSKSIFPLRKGKEVPPSFKHFF
SSAASISSINVSGTKLPPEALKALLLGLASNPNVKDVALDLSCCELGHCLRSGGSQILEG
CIAEIPNISSLDISDNGLDSELSTLLVWLAKNRSIKHLCLGKNFNNIKSKNLAPVLDGLV
QMIQEEESPLTSLSLADSRLKSDLTIVLNALGSNSSLTRLDISGNAMGDIGAKMLAKALQ
INSKLRTVIWDKNNTSPQGLQDVAAALEKNFTIRFMPIPIIDASQALKASPEKTEDALSK
IENYVYRNQETKKYLQEQAYRLQQGIVTTTTQQMMDRICVKVQDHLNSLRNSDADTILED
VRSAENLIKDARNSKTLLPNLYHLNSGSREEMNSLSMSPIQEKLESMAGELTTVVDQQLQ
GLLESMIDAAESLCPHVMKRSNLRPELMKASSDRMVVPKSFVTKTLLEQSGMDIINKISE
VKLSLASFLTDRIVDEILEVLSASQLTLADHLVRRGRPLVRHESVDHDIPEERISKRASA
EILEAERLDDLEACMTLCCTSMTPKTKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPIHV
EDTSTPSSPPVVTPKQEQQQPGVIAELPSEEEKKLQHFTKLRPRRNKKTNSSKVPQINST
PSQDGEQNGLMGRVDEGVDEFFSKKVTKINSRRFLRSSDSQDGEKKKSKGGFLNLIKRSS
KSDKSDKSDKSEKNQAAPTSSGSSSASAASPLTHIIPEEPSSPKTAAKSPAPEPRSRDAS
SRSQATDYSSSSDRSEELRTPDSMDEPWESSDGRGSPQGGKRYTGVQMMGSGLLAEMKAK
QERRAHKSSSPDRPDSNTAVKPQFSSTESRSPSSSSNRTSPAAPDKSSTRSEPKPDPATR
VRATSSSSSPVSPGTPKPPVPQGAKPALAARPTIPQKPRTSSSSRTADDGSESPRSGSAS
PNVLHLTLKKGSSEKDKESSQQSGVSSDTQEDAVQHQTLSNSSEDSGSLKNKDKCPNADK
EKATSKKASSSGEEGDKDFIIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagacgtgtcggaggtctcgaaagagctgctggagagtgtgagggattctgtg
gggaggaaggtgaagctgtccctgaggaaaagggtcaagctggaggtcaagggagataag
acggagaaccgagtcctggcgcttgcatcctaccgtgcctacctcttgacagctcgaatc
cccaccaaggtggaacactcctttaattatctggagatccagggagttgcttgtaacaag
ccgacacagctatgcatagattatgagcgtggctccttctcgctgaggctgccctccaca
gaggaggtcaatgaggtggtggctcacatagggaactgtctgctgaggatatgtcctggc
ctcccgccctataaagtgatgaagaagctctccatggagccctctgacaggctgccccct
ctgcagactctgtgggagaacaacaagctggctgaaccaggaccctgtggtgggttttcc
cagatgtacaaatgtgtgtgcgactggttaggtctgccttacagagaagaggtacagtgg
gatgttgacaccatctatttaacacaagacaccagagaacttaatctgcaagacttcagt
cacctggagaacagggatctggtggctataatagctgtcctggagtttaaccaatggttc
accaagctctccaccaaggattacaaactgtcggcagatgtgtgcgagcagatccttcgg
gttgtggctcgatccagtcgactggaagagcttgttctggacaacgcaggactcaaaacg
gactttgcccagaagctagctgctgccttggcctacaaccccagcacaggattgaccgcc
atcaatttgtccaacaatccactggaggacagaggtgtttcttctttaggtgctcagttt
gccaaacttcaaattgggctaaagcatttaaacttttccagaacctcactgtcacccaaa
ggtgtgaacagcttatgccactcactgagtgccaacccgtccatacccgccagcctagtc
catctggacgtctcagggaacatgcttcgaggagacgacatgcagcatttctacaacttc
ttaggtcaacccaacagcctaacaacacttgacctctccaacacagactgctctttggac
caggtttgctcggctctgctgcgaggctcagttcagcacctctctgttctcaacgtgtcc
aagagcatctttccactcaggaaaggcaaagaagtgcctccctcattcaagcatttcttt
agtagcgccgcatccatcagctccataaacgtgtccggaaccaaactgccgccagaagct
ctcaaagctctcctgcttggcctggcaagtaatcccaacgtgaaagatgtggcgctcgac
ctcagctgctgcgagcttggccattgtctgcgatctggaggctctcagatccttgaaggt
tgtatcgctgagatcccaaacatctccagcttggatatctctgataatggcttggactct
gagctttcaactctgcttgtttggttagccaagaaccgctccatcaaacacctgtgtctg
ggcaagaacttcaacaacattaagtccaaaaacctcgccccagttttggatggcctggtc
caaatgattcaggaggaggagtcgcccctcacatcgctgtctctagcagactcgagactc
aagagtgatctgaccattgttctcaacgccctgggcagcaattcctcactgacccgactg
gacatcagcgggaacgccatgggggacataggcgccaagatgttggcaaaggcgctgcag
atcaactccaaactcaggactgtgatctgggataaaaacaacaccagccctcagggtcta
caggatgtagcagctgctttagagaagaacttcacaattcgcttcatgccaattcccatc
atagatgcctcccaggctttgaaggcaagccctgaaaaaacagaggatgctttgtcgaag
attgaaaattatgtatataggaaccaagaaaccaagaaatacttacaagagcaggcttac
cgactacagcagggcattgttaccacaaccacgcagcagatgatggaccggatttgtgtg
aaggtgcaggaccatctgaactccctgagaaactcagatgcagacacaatcttggaagat
gtgagatcagctgagaacctcatcaaagatgccagaaactctaaaactctgcttcccaac
ctctaccacctcaactcagggtccagagaggagatgaacagtttgtccatgagtcccatc
caggagaagctggagtccatggcaggagagctgactacagtcgtggaccagcagctccag
ggtttattggagtccatgatagatgcagcagagtctctgtgtcctcatgtcatgaagagg
agtaaccttcgtccagaactgatgaaggccagctctgacaggatggttgtgcctaaaagc
tttgttaccaaaactcttttggagcagtcaggaatggatattatcaacaagatcagtgag
gtaaaactaagtcttgcctcctttcttacggatcgcatcgttgatgagattttggaggtt
ctctctgcgtcgcaactcactctggctgaccacttagttcgacgaggtcgccccttggtg
cgacatgagtcagtggatcatgacatcccagaggaaaggatttccaaacgggcatcagca
gagatactggaggctgagaggctggacgatctggaggcatgcatgactctttgctgcacc
agtatgactccaaaaaccaaaaggaaaagcatccacagcagaatgctacgcccagtatct
cgtgcttttgagatggagtttgacctggataaggctctggaggatgtccccatccacgtc
gaggacacctccactccatccagtccacctgtggtgacgcctaaacaggagcagcagcag
ccaggagtgatcgcagagctgccatcagaggaggaaaaaaaactgcagcacttcaccaaa
ctacggccgcgaaggaacaagaaaacaaattccagcaaagtgcctcaaatcaacagcact
ccatctcaagatggggaacagaacggactcatgggcagggtggatgaaggagtggatgag
ttcttctccaaaaaggtcacaaagataaattccagacggtttttgaggagttcagactct
caggatggagagaaaaagaagagtaaaggaggatttctgaacctcatcaagcgatcttct
aaatcggataaatcagataagtcggataagtcagagaaaaaccaagcagctccaacatcc
tctggctcatcctcagcctctgcagcctcgcctctgactcatatcatcccagaggagccc
tcctctccaaagacggcggccaaaagcccagcacccgaaccaagatccagagatgcctcc
agccgctcgcaggccaccgactacagcagcagctccgaccgctcagaggagctgaggacg
ccggactccatggatgagccgtgggagagctctgacggcagggggagtccacagggaggg
aagcggtacactggagtgcagatgatgggcagcggcctcctggcagagatgaaggccaaa
caggagcggagagctcacaagtcttccagccctgacaggcctgacagcaacacagcagtc
aaacctcagttctcaagtacagaaagcaggtctcccagcagttcaagtaacagaaccagc
cctgctgcccctgacaaatcctcaacacgcagcgagccaaagcctgatcctgccactcgg
gtcagggcaacatcttcctcgagttcccccgtcagcccgggaaccccaaaaccaccggtg
ccacaaggagcaaagcctgctctggctgcacgacccaccatccctcagaaaccaagaacc
agcagcagcagcaggaccgcagacgatgggtcggagtctcccaggagcggcagcgcgtct
ccaaatgttctgcatttaacactaaagaaggggtcgtcggaaaaagacaaggaaagcagt
cagcagtctggagtttccagtgacactcaggaggatgccgttcagcatcagacgctcagc
aacagctctgaggactccggctccctcaagaacaaagacaaatgtccgaacgcagacaag
gaaaaggcaacgagcaagaaagcatccagctctggagaagaaggagacaaggactttatt
ataacataa
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