Oryzias latipes (Japanese medaka): 101156710
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Entry
101156710 CDS
T02443
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03082
ATP-dependent chromatin remodeling
ola03083
Polycomb repressive complex
ola04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101156710
03083 Polycomb repressive complex
101156710
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
101156710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101156710
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
101156710
Histone modification proteins
HAT complexes
HATB complex
101156710
HDAC complexes
Sin3A-HDAC complex
101156710
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
101156710
PRC2.2
101156710
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
101156710
Heterochromatin formation proteins
Other heterochromatin formation proteins
101156710
Chromatin remodeling factors
NuRD complex
101156710
NuRF complex
101156710
NuRF complex (fruit fly)
101156710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
101156710
NCBI-ProteinID:
XP_023809579
LinkDB
All DBs
Position
3:38147057..38153753
Genome browser
AA seq
490 aa
AA seq
DB search
MREAHRDWRLGSAAQRFVLELSPGFCDRSAALRPGSDMADKEVYDDAVEERVINEEYKIW
KKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYAVHRLVLGTHTSDEQNHLVIASV
QVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHDGEVNRARYMPQNPCIIATK
TPTSDVLVFDYTKHPAKPDPSGECSPDLRLKGHQKEGYGLSWNPNLSGNLLSASDDHTIC
LWDIGAGPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTS
KASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV
QWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLVGPLASRLVGGLLKVL
MWSFPVVLHQFIHGGHTAKISDFSWNPGEPWIICSVSEDNIMQVWQMAENIYNDEEPDNT
PASELEPQGS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaagcgcaccgtgactggcggctcggttcggcggcgcagcggttcgtactggag
ctctcccccggtttctgtgaccgctccgcggctctcagacctggttcggacatggcggac
aaagaagtctacgatgacgcggtggaggagcgggtcatcaacgaggagtacaagatctgg
aagaagaacacgcccttcctgtacgacctggtgatgacgcacgcgctggagtggcccagc
ctcacggtccagtggctgccggacgtcagcaggcccgaggggaaggactacgccgtccac
aggctggttctggggacgcacacgtcagatgagcagaaccacctggtgattgccagcgtg
caggtacccaacgacgacgcccagtttgatgcgtcgcactacgacagcgagaaaggagca
gagtttggagggtttggttctgtgagcgggaaaattgagattgaaatcaagatcaaccac
gacggagaggtgaaccgggctcgctacatgccccagaacccctgcatcatcgccaccaaa
acccccacctctgacgttctggtgttcgactacaccaagcaccccgccaagcccgacccc
agcggggagtgcagcccggacctgaggctcaaaggccaccagaaggaaggttacggcctg
tcctggaaccccaacctgagcgggaacctgctcagcgcctccgatgaccacaccatctgt
ttgtgggacatcggcgccggcccaaaggaaggcaaagtggtggacgctaaaaccatcttc
acgggccacaccgccgtggtggaggacgtctcctggcatctgctccacgagtccttgttc
ggctccgtcgccgacgaccagaagctgatgatatgggacactcggtccaacaacacgtcc
aaagccagtcactctgtggacgctcacaccgcagaggtcaactgtctgagcttcaacccc
tacagcgagttcattctggccacgggctccgccgacaagaccgttgcattgtgggacctg
aggaacttgaagctgaagctccactccttcgagtctcacaaagacgagatcttccaggtc
cagtggtctcctcacaacgaaaccatcctggcctccagcggcaccgaccgccgcctcaac
gtctgggacctgagtaaaattggggaggaacagtctgcagaagacgcagaggacggccct
ccggagctgctggttggtcctctcgcctcacggttggtgggcggtcttctcaaagttctc
atgtggtcttttcccgtcgttctgcatcagttcatccacggcggccacacggccaagatc
tcagacttctcctggaaccccggcgagccgtggatcatctgctccgtgtccgaggacaac
atcatgcaagtgtggcagatggccgagaacatctacaacgacgaagagccggacaacacc
cccgcatccgagctggagcctcagggttcataa
DBGET
integrated database retrieval system
