Oryzias latipes (Japanese medaka): 101156736
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Entry
101156736 CDS
T02443
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00310
Lysine degradation
ola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101156736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101156736
03036 Chromosome and associated proteins [BR:
ola03036
]
101156736
Enzymes [BR:
ola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
101156736
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101156736
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101156736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-C2H2_8
zf-C2H2_jaz
YjdM_Zn_Ribbon
Motif
Other DBs
NCBI-GeneID:
101156736
NCBI-ProteinID:
XP_023812270
LinkDB
All DBs
Position
7:complement(8631623..8641017)
Genome browser
AA seq
1212 aa
AA seq
DB search
MSDLQHQDLEEEEDSHQEERDMSSDCTDPYMTLIQRAVRESLFCHFCERHFSSSQGLEQH
ACCNNTDKKLSSNVNPLWHEEGKPLVSAGSDIQQYKPEESPQILEKEASELRTLPGKHEG
ISENLTFNIDGKTVPTRNVSNCEVAEGQCGSSAVVGFEMSNVLSTDTEPPDLQHSKRNTT
THPLSPKTRTDLESELAVTSSSSPPFVPPVIQSSYPQNSEFTDEQKQITGFLTPNLKQES
LKPTHVVITDTQKPSSPVTFSVLPSGRFKRRTSSPTTFPQLNLASGEGTAAPDTGDVVAA
NTGLQGSCTQQTMNDCMIPCVGEQAPKPALMDRQPSVTGGNSCNQRPLDLSNTVKANDSA
SAVLDLSLQKSIHSGSELSLNLGEKALKQTGKEKESQGLKSPIITLLTASEIVTPVEPVA
EGLVYGLTLSPPSLPPPSASFGPVALESASPCTIAFASPVAHSMLPTAPSLITVLAPPPV
SNPLCQPIQVMAPDISSEPMVICTENAFNSQCDLATAFATTNSANLVALSQPLDPALHLP
SHVLLDSTPVSEVPLTPSVNLSDSLFSSYNIASNAVLIECTIALDGPRTVVPAAVNPPED
ATDFTTPTQMVVNPIKHLLPDPETVHPSIMVSSAAESLTLPANAEVMSGNSVVGESNCEA
VPVVNPESPAGKDEDAADKSVALSENALEMTSSLPEKAEEPVHNTIDVQEQTFTKNFICN
VCDKLFHSMKELGHHVGDHADEWPYKCEFCVLLFGKPSALLDHRSSLHGVGKTYVCCACT
KEFVYLCNLKQHQEELHPGQPCTYTEDEKGKLRPQNYNNSTKVNTDPPAAKSLQEPSDLV
KKEKSEVDVAAEELFTTIKIMASDGGKVKGPDVRLGIYQHYPSFKPPPFPYHNRSPAGSV
ASATNFTTHNIPQTFTTAIRCTKCGKSFDNMPELHNHILACANASDKRRYTPRKNPIPLR
HFAKAQNGVLWITNSSNGIKASIRVSPASRSKPGQESPVKLRILKKKKKKLVQRVLPQRN
KSVSSSNKASPPQVDRQQEVFVCPHCSREFTMRRSRTKHMAVCPKKPTEMTKRKEGGISV
TKENDGHLHRGVSRVNEKQSSPPHKTRHQTSGSAKRHAILPVQAVFPNKRSKISIKESAE
PKQESPTLTEIPIRTFNPSMRQYSRVQQNVRVPVKITVVRPQQTASERDTPNKSQEEAGR
AVTRLSEQSTSV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctccaacaccaggatttggaagaagaggaagacagtcaccaagaagaacga
gacatgagttctgactgcaccgacccttacatgaccctcatccaaagagctgtaagagag
tctcttttctgccacttctgtgaaagacatttcagcagcagtcaaggattggaacaacac
gcttgctgtaataacacagataaaaaattaagttcaaatgttaatcctttgtggcacgag
gaaggaaagcctctggtttcagccggatcagacatacaacagtataagccagaggaaagt
ccacagattttagagaaggaagcatctgagcttcgaacgctgcctggaaagcatgagggc
atttccgaaaatctgacttttaatattgatggaaagaccgtgccaaccagaaacgtcagt
aactgtgaagtagctgagggtcagtgtggatcttcagcagtagttggatttgagatgagc
aatgttttgagtacagatacagaaccacccgatctgcagcatagcaagaggaacactaca
acacaccccctctcacccaaaaccagaactgatctggagtctgagttggctgtaacatca
tcatcatcaccaccatttgttcctcctgtaatacagagctcatatcctcagaattctgag
tttacagatgaacagaaacaaataaccggatttctgactcctaacctgaagcaggaaagt
ctgaagcccactcatgtcgtcattacagatacccagaagccatcctcacccgtcactttc
tctgtcctgccgtctggaaggtttaaaagaagaacaagctctccaacaaccttcccacag
ctaaacctagcatcaggtgaaggaacggcagccccagatacaggcgatgttgttgctgca
aatacaggactgcaggggtcatgtacacagcaaaccatgaatgactgtatgattccatgc
gtgggagagcaggcacctaaaccggctctgatggacaggcagccttctgtaaccggtgga
aattcatgcaaccagcgcccgctggacctgtccaacaccgtcaaagcaaatgactccgct
tccgctgtgttggacttgagtttgcagaaaagcatccacagtggttctgaactgtcatta
aatttaggggagaaggctttaaagcaaacaggaaaagaaaaagagagtcaaggtctaaaa
tctcctataattactctattaacagcttcagaaattgtgacccccgtggagcctgttgct
gaaggccttgtttatgggcttaccctatctccaccttccctacctccaccctccgcttcc
ttcggccccgttgccttggagtcggcttctccgtgcacaatcgcatttgcttccccagtc
gcacatagcatgcttcccaccgcgccctccttaatcacagttttagccccgccacctgtt
tccaaccccttatgccagccaatccaggtgatggcccccgacatatcctctgagcccatg
gtcatctgcacagaaaacgcattcaattcccagtgtgatttagctactgcatttgccaca
acaaactctgcaaaccttgtcgccctttcacagcctctcgatccagccctgcatctaccc
agccacgtgcttctcgactccacccctgtgtcagaggtgcccctcactccctcagtcaat
ttaagtgactccctgttcagttcatacaacattgccagcaacgccgtgttgatcgagtgt
acgatagctctcgatggcccaaggactgtcgttcctgctgcagttaaccccccagaggac
gccacagactttaccacgccaacacagatggttgtaaatcctatcaagcacttactgcct
gaccctgaaactgttcaccccagcattatggtgtcctccgctgcagaatctttaactctg
cctgctaacgcagaggtgatgtctgggaattctgttgtgggtgaatcaaactgtgaagca
gtgcctgtggttaacccggagtcacctgcgggaaaagacgaggacgctgctgacaaatct
gttgctctgtcagagaatgccctggaaatgacttcgtctctgccagaaaaagctgaagaa
ccagtccataatactatagatgtgcaagagcagacctttacaaagaacttcatctgtaat
gtgtgtgataagcttttccattcaatgaaagaactaggccatcatgtaggtgaccatgct
gatgaatggccttacaaatgtgagttctgcgtgctgctctttggcaaaccctcagctttg
ctcgaccatcgatcaagcctccacggcgtcggaaagacttatgtctgctgtgcttgtact
aaagaatttgtctacctttgcaatcttaaacagcatcaagaagaattgcatcccggtcag
ccatgtacatacactgaagatgaaaagggaaaacttagacctcaaaactacaacaactca
actaaagtcaacacagatcctccggctgccaagtctctacaggagcccagcgacttggta
aaaaaggaaaaaagtgaagtcgatgtggctgctgaagagctttttacaaccattaagata
atggcttcagatggtggcaaagtcaaagggcccgatgtccgacttggcatttaccagcat
tatcccagcttcaagccgcctccttttccttatcacaacagatcacctgccggttcagtc
gcttctgccacaaacttcacaacccacaacatcccacagacttttaccacggctatcagg
tgtaccaaatgcgggaaaagttttgacaatatgccagaactacacaaccacattttggcg
tgtgcaaacgctagtgacaaaagacgatacacgccacggaaaaaccccatccctttacga
cactttgcaaaagctcaaaatggagtcctttggattaccaactcctctaacggaattaag
gcttcgattagagtcagtccagctagcaggtctaaacccggtcaagaatcaccggtaaag
ttaagaatattgaaaaaaaagaagaaaaagttggtgcaaagagttctgccacagaggaac
aagtctgtctcttcgtcaaacaaagcttctcctccacaggtggataggcaacaggaggtc
tttgtctgtcctcactgtagcagggagttcacaatgcggcggagtcgaaccaaacacatg
gcagtctgccccaagaaacctacagagatgaccaaaaggaaagagggaggaatctctgtc
acaaaggaaaatgacggacaccttcatcggggagtctctcgcgtgaatgaaaaacagtcg
tcacctccacataaaacacggcaccagacctctggttctgcaaagaggcacgccatccta
ccggtacaagctgtcttcccaaacaaaagaagtaaaatcagcataaaagagagcgctgag
ccaaagcaagagtcgcccactctgacagaaatccctattcgcactttcaatccttccatg
cggcagtatagccgagtgcagcaaaacgtccgagttcccgttaagatcaccgtggtgagg
cctcaacagactgcatcggagagagacactcccaataaaagccaagaggaagcaggcaga
gccgttacccggctctccgagcagagcacttcagtgtga
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