Oryzias latipes (Japanese medaka): 101156764
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Entry
101156764 CDS
T02443
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101156764 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101156764 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
101156764 (pdlim1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101156764
NCBI-ProteinID:
XP_011483085
UniProt:
H2MGG2
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All DBs
Position
15:complement(29954908..29960804)
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AA seq
321 aa
AA seq
DB search
MPLRVVIQGPGPWGFRLVGGKDFEQPLAISRVNTGSKAAQANLCIGDIILAIDGEPTDNM
THLEAQNKIKACGDEMVLSVDRSEAKLWSPLSADEGKSHPYKMNLASEPREVKHIGSTHN
RSALPFAGFGPKVVTNQYNSPSGLYSSDNIRDLDSAVDAVQTMTVSGEPSRAPSDPSAAA
TRPAVTAGSEVYKMLQENQESDEPPRQSASFKVLQEILETGDADKPSGFRSVKAPTTKIG
SSMGNAEKLPVCDKCGSGIVGMVVKLRDKFRHPECYTCTDCDINLKQKGHFFVEDQIYCE
KHARERVTPPEGYDVVTVFPK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgggtggtgattcagggtcccgggccctggggcttccggctggtggggggg
aaagacttcgagcagccgctcgctatttcgcgggtcaacacaggaagcaaagcagcccag
gccaacctgtgcattggtgacatcatcctggcgatcgacggagaacccacagacaacatg
actcacctggaggctcagaacaagatcaaggcttgtggcgatgaaatggtgctctccgtg
gacaggtcagaggccaagctgtggtcgccgctctccgctgacgaagggaagtctcatccc
tacaagatgaatctggcatcagagccgcgggaggtgaaacacattggctccacccacaac
aggagcgctttgccttttgctggctttggccccaaagtggtgaccaaccagtacaacagt
ccgtctggtctgtactcgtcagacaacatcagggacttggactctgctgtggacgccgtg
cagaccatgaccgtatcaggagaacccagcagagctccttcggatccgtctgctgcagcg
acgaggccggccgtcaccgccggttctgaagtctacaagatgctgcaggagaaccaggag
tcggacgagccgccgcggcagtccgcctccttcaaggtgctgcaggaaattctggagacg
ggtgatgcagacaaaccgtcgggcttcaggagcgtgaaggcccccaccacaaagatcggc
tcctccatgggaaacgcagagaagttacccgtctgtgacaaatgcggatcggggatcgtg
gggatggtggtgaagctgagggacaagtttcgccaccctgagtgctacacgtgcacggac
tgcgacatcaacctcaagcagaaaggccatttctttgtggaggatcagatctactgtgag
aagcatgcacgagagcgagtgaccccccctgagggctacgacgtggtcactgtcttccct
aagtag
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