Oryzias latipes (Japanese medaka): 101156836
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Entry
101156836 CDS
T02443
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X2
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101156836
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101156836
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101156836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
FYVE
Prok-RING_4
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
101156836
NCBI-ProteinID:
XP_004075189
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All DBs
Position
12:complement(27926146..27940397)
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AA seq
478 aa
AA seq
DB search
MLRCRKCRRAIVHSECLSKASDDSSAAVCSVWHVNVEQLPEWILTSVHQSQWTAGRLNCH
NCRARLGGFNFVNRTVCPCGLDAAVHLSKSRVDQDHRHRVLLVQPRSSRPGGGQNGLLTD
SYQGDEASELRGAVPDVLQLHCVAAAPGFRPAEGALPLGDREDAQLFSFSPLYCIPHRRC
SLEEDGDFGSCFCPSAPHSSSQQVRSEAVFEGALVRPAPPWQGLQRRPLESSGDEAGSEL
LLRRTSGFDRAAEREEEVLRQATLSPPAPTLSRREKNHLKSQKRKERRRERWLHRQLEEE
EGGALHNADKAADREAMTCAVCLDIYFSPYSCHPCGHVFCEPCLRTLTKNRPANTPCPLC
RTVISHTSFHQEFNQTSKTLFPKIYSSRQTSFRNSSCAKWPLPSQRKHFSGFWDYRRSAT
MAGRRWHFVHGGFTLEALNFHSMRRWLLDIGLVIVYVHSLNWILILLFLCILMYYFFF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcaggaagtgtcgcagagccatcgtccactcagagtgcctgtcaaaggcc
tcagatgacagttcagctgcggtttgcagcgtttggcacgtgaatgtggagcagctgccg
gagtggatcctgacgtctgttcaccagagccagtggactgcaggaagactgaactgccat
aactgcagggctcgtttgggagggtttaacttcgtcaaccgcaccgtgtgcccgtgcggt
ctggacgccgccgtgcacctgagcaaaagcagggtggatcaggaccacaggcaccgcgtc
ctcttggtccagccgaggagctccaggccgggcggaggacagaacggcctgctgacggac
agctatcagggagatgaggcgtctgagctcaggggagcggtgccggacgtcctgcagctc
cactgcgttgccgctgcgcctggcttcaggcctgcagagggggccctccccctcggggac
agggaagacgctcagctgttttccttcagccccctgtactgcatccctcacaggaggtgc
agcctggaggaggacggggacttcggctcgtgcttttgcccttcagccccgcactcctcc
agccagcaggttcgctcagaagctgtgtttgagggcgcgctggtgcgcccggcgccgccc
tggcagggactgcagcgacggcccctggagtcttctggggatgaagcgggttcagaactg
ctcctcagaagaacgtctggcttcgacagagcagctgagcgggaagaggaagtcctgcgt
caggccactctgagcccccccgctccgacgctgagccggagggagaagaatcatctgaag
agtcagaagaggaaagagaggaggagagagcggtggctgcaccgtcagctggaggaagag
gaggggggggccctgcacaatgcggacaaggcggcggacagggaggccatgacctgcgcc
gtgtgtctggacatctacttcagtccgtacagctgtcacccctgcggccacgtcttctgc
gagccctgcctccgcacgctcaccaagaaccggcccgccaacaccccctgcccgctgtgc
cgcaccgtcatctcccacaccagcttccaccaagagttcaaccagacctcaaagactctg
ttcccaaaaatttactccagccggcagaccagcttcaggaactcctcctgtgccaagtgg
ccgctgcccagccagcgtaaacacttctccgggttttgggattaccgtcgaagtgctacg
atggcgggaaggcgctggcactttgtccacgggggcttcacgctggaagctctgaacttc
cacagcatgcggcgctggctgttggacatcggcctggtcatcgtctacgtccactcgctc
aactggatcctgatcctcctcttcctctgcatcctgatgtactacttcttcttctga
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