Oryzias latipes (Japanese medaka): 101156841
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Entry
101156841 CDS
T02443
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X6
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101156841
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ola01001
]
101156841
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101156841
03036 Chromosome and associated proteins [BR:
ola03036
]
101156841
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
101156841
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101156841
Protein kinases [BR:
ola01001
]
Serine/threonine kinases: Other
TAF1 family
101156841
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101156841
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
101156841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
101156841
NCBI-ProteinID:
XP_011481906
UniProt:
A0A3B3HKQ6
LinkDB
All DBs
Position
14:complement(15963410..15980399)
Genome browser
AA seq
1950 aa
AA seq
DB search
MSDSDSDEDQGRPFSLTGFLFGNINEDGQLEDDSVLDNESKKHLAGLGTLGLGSLITEIT
ANEGEEKENKDSENVDGEGWVKSTDDAVDYSDISEVAEDETKKYRQAMGSLQLSRKTDDD
DDYDADCEDIDSKLMPPPPPPSLSLPEKEESSSQSTNGKDSCTAGEDGDGIILPSIIAPS
SAADKVDFSSSSDSESETDRPCQISGSGGPPDRLTLPLAGIMQKDAAKALPGVTELFPEF
RPGKVLRFLRLFGPGKNMPSVWRSARRKKKRKHRDPQPGTPPPEGEVSEPGLEKKSGWIY
EYALPPPPEQCLSDDEITMMAPVESKFSQTSGDGDKETESRPKVAEWRYGPAQLWYDMLG
VPEDGSGFNYGFKLKRLESSEPQKQEIPKEITEIPQETVQRQKEMNDSDGEEVDGNEEKQ
ALENEVFLMVTQLKWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLT
RSNSQLVPPTPPPIPKTPTITGAKRDKSSLDHQASQEESCSWYSIFPIDNEELVYGRWED
NIIWDDQEMDHMLAPPVLTLDPNDENIILEIPDEKEEATSHSPSKENKKETAIKKSRILL
GKTGVIKDEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALELRQPF
FPTHMGPMKLRQFHRPTLKKYSFGALAQPGPHAVQPLLKHIKKKAKMREQERQASGGGDM
FFMRTPQDLTGKDGDLILAEYSEEYPPLIMQVGMATKIKNYYKRKPGKDPGAPDCKYGET
VYCHTSPFLGSLHPGQLLQAFENNLFRSPIYLHKMPETDFLVLRTRHGYFIRELVDIIVV
GQECPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSI
RKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAG
YGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADPTGCGEG
FSYVKVPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSR
WEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEV
LSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEESDNKG
RKDRRKGLSSSLSTSSHKDDDTSSVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKA
AVIDAYTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKIKGPPE
KKAKKAKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVI
HNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPQKKKRRVGSAVHCDYLN
KPHKAIHRRRTDPMVTLSSVLESLINDMRDHPNTYPFHTPVNAKVVKDYYKIITRPMDLQ
TLRENVRKRMYPSREEFREAVELIVKNSATYNGAKHPITQVAQSMLDLCDAKLKEKEDRL
VRLEKAINPLLDDDDQVAFSFILDNIVTQKMMIVPDSWPFHHPVNKKFVPDYYKVIPNPM
DLETIRKNISKHKYQNRDAFLSDVSLIHANSIKYNGPDSPYTKTALDIISICKQTLAEYD
EHLTQLEKDICTAKEAALDAADLDGFESMPGPYTPQGRHGRRPGEEESDVDIEGFEEEDD
GKPKTPAPAEDAEGDLEDEDDDDEMLLPPRRRAHDQDEDEEEREHRRSSHPAQSSVLYQD
LLMSDGEDDASEEEGDNPFSSIQLSESGSDSDREVNVRPPPPRRTQETARMGMEQDESMM
SYEGDGPDGPTLEDSNISYGSYEETESRSQTQTSTMINGEEYGISEEEEDEEDEARRRGP
AVLSQVQLSEDEESEEFRSIGGDSDMDSDN
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctgacagtgacgaagatcaaggtcgcccgttttccctcactggcttcctc
tttggaaacatcaatgaagacggacagttggaggatgatagcgttttggacaatgagtcc
aaaaagcatctcgctggtttaggaactctgggtctgggttctttaattacagagattact
gcaaatgagggcgaggaaaaagaaaataaagattcagaaaatgtcgatggggaaggttgg
gtgaaaagcactgacgacgctgtcgattattctgacatcagcgaggtggcagaagatgag
accaaaaagtaccgccaggctatggggtctttgcagctaagccggaaaactgatgacgac
gacgactatgatgctgactgtgaggatattgactctaagctcatgcctccaccgccgccg
cctagtctttcattgccagagaaggaggaatcctcaagccagagcacaaacggtaaagat
tcatgtactgcgggggaagacggtgatggcatcatcctgccctccatcattgcaccatcc
tctgctgctgataaggtggacttcagcagctcttcagactctgagtcagaaactgacaga
ccttgtcagatctctggatctggaggcccccccgacagacttaccctccctcttgctggc
ataatgcagaaagatgcagccaaagctctgcctggcgtcacagagctctttccagagttt
aggcctggcaaggttctcaggttcttaaggctgtttggtcctggaaagaacatgccgtca
gtttggaggagtgcccgcaggaagaagaagcggaaacacagggaccctcagcctggaaca
cctccacctgaaggtgaggtgtcagaaccaggcctggagaaaaaatcgggatggatttat
gagtacgccctccctccacccccagagcagtgcctctccgatgatgagataactatgatg
gctccagtggagtcaaagttttcgcagaccagtggggatggggacaaggagacagagtct
cgacctaaagtggcagaatggagatatggtccagctcagctctggtatgacatgctgggt
gtacctgaggatggaagtggtttcaactatgggttcaagctgaaaaggctggagtccagt
gagcctcagaagcaggagatccccaaggaaatcacagagattcctcaagaaacggttcag
agacaaaaggaaatgaatgacagcgatggagaggaagttgatggaaatgaagaaaaacag
gctttagagaatgaggtcttcttgatggtcactcagcttaagtgggaggatgatatcatt
tggaatggagaagatgtaaagcacaagggaaccaagacacagagagccagtctggcagga
tggcttccctccagcatgacgcgcaacgccaatgcttataatgcacagcaaggtctcact
agaagtaattctcagctggtaccaccaacgcctccacccatacccaaaactcctacgatc
acaggtgctaaacgggacaaaagcagcctcgatcatcaagcttctcaagaagaatcctgt
tcctggtattctattttccccattgacaatgaggagctggtgtatggccgatgggaagac
aacatcatctgggatgatcaggagatggatcacatgcttgcaccacctgttcttacactg
gatcccaatgatgagaatattattctagaaattccagatgagaaagaagaagcgacctca
cattcaccatcaaaagagaataagaaggaaactgcaattaagaagagccgcattttattg
ggaaagaccggagtgatcaaagacgagccgcagcaaaacatgtcccagcctgaagttaag
gatccctggaatctctccaatgatgagttttactaccccaaacagcaaggtctgagagga
acctttggtggcaatatcattcagcattcaatcccagctctagagctacggcagccattc
ttccccactcacatgggacccatgaagcttcgccagttccatcgtccaacactgaagaag
tattcatttggagctttagctcagccgggcccccacgctgttcagcccctactcaaacac
atcaagaagaaggccaagatgagagagcaggagcggcaagcttcaggaggtggagacatg
ttttttatgcgaacgccacaagacctgacaggcaaagatggcgatctgattctagcagaa
tacagtgaggaatacccgcctcttatcatgcaagtgggcatggctacaaagatcaagaac
tactacaaaaggaaacctggaaaagatcctggagcgccagactgtaagtacggagagact
gtgtactgccacacgtccccctttctgggctctttgcaccctggacaattactccaggca
tttgagaacaacctttttcggtccccgatctatctgcacaaaatgccagaaacggatttc
ttggtcctacgaacccggcatggctacttcattagagagcttgttgacattattgtagtt
ggacaggagtgtcccttgtttgaagtcccagggccaaactccaagcgagccaatactcac
atcagggacttcttgcaggtgtttatttaccgcttgttctggaagagcaaggatcggccc
agaagaatccgcatggaggacataaagaaagcttttccgtcacactcagaaagcagcatc
aggaaacggctcaagttatgtgcagacttcaaacgtacaggtatggactccaactggtgg
gtgttgaaaccggacttcagattgcccacagaagaagaaatccgagccatggtgtctcca
gagcagtgctgtgcttattacagcatgcttgtggcagagcagaggctaaaggatgctgga
tatggtgagaaatctttctttgccccagaagaagagaatgaggaggactttcagatgaag
attgacgatgaggtgcggacagctccttggaacacaacacgagcgttcatttctgccatg
aagggaaagtgtctgctggaggtgactggtgtggcagatcccacaggctgtggggagggt
ttctcctatgtgaaagtgcccaacaagcccacccaacagaaggatgacaaagagcctcaa
cctgtcaagaagacggtgacggggacagatgcagatctcaggaggctttcacttaagaac
gccaagcagctgcttcgcaagtttggagttccggaggaagaaatcaagaagctctctcgc
tgggaggtaatcgatgtggtgagaaccatgtccacagagcaggcgcgatcaggcgaaggt
cccatgagcaaatttgccagaggctctcgtttctctgtggctgaacaccaggagcgctac
aaggaagagtgccagaggatctttgatctgcagaacaaagttctggagtcaacagaggtg
ctgtccacagacacagacagcagttcagcagaagatagtgactttgaggagatgggtaaa
aacattgagaacatgctgcagaacaaaaagaccagctcccagctttctcgggagagagaa
gagcaggaaaggaaggagctgcagaggatgctgatgggagaagagagcgacaacaaagga
cgcaaggataggcgtaaagggttatccagttccttgtccaccagctctcacaaagatgac
gacacatcttctgtcaccagcctaaactcctcagctacgggacgcagactcaagatctac
cgcacatttagagacgaggatggtaaagagtatgtgcgctgtgagactgtgaggaaggct
gcagtgattgatgcatataccagaatcagaaccaccaaagatgatgaattcatacgaaag
tttgccctgtttgatgagcagcacagagaggagatgaggaaagagcgtcggcgaattcag
gagcagctcaggaggctgaagagaaaccaagagaaggacaagatcaaaggtcctccagag
aaaaaggccaagaaagccaaagagagaccagacctcaagttgaagtgtggagcttgtgga
gccatcggccacatgaggaccaacaaattctgtccgctttactatcaaaccaacgctcca
ccctcaaatcctgttgccatgacagaagagcaggaagaagagctggagaagacggtcatc
cataatgacaatgaggaactgatcaaagtggaaggaaccaagattgtactgggaaagcaa
ctcattgagagtgctgatgaggtgcgcaggaagtctttggtgctgaagtttcctaagcag
cagctgccgcaaaagaaaaagagacgtgtgggaagtgcggtccactgcgattacctcaat
aaaccgcataaggcgatccaccgcagacgcaccgaccccatggttactttgtcctctgtg
ctagaaagcctcatcaacgatatgcgggatcatccaaatacataccccttccacacaccc
gtcaatgccaaggtggtgaaggactactataaaatcattactcggcccatggatctgcag
acgctcagggagaacgtgcgcaagcggatgtacccgtccagggaggagtttcgtgaagct
gtggagctcattgtgaaaaacagtgccacgtacaacggcgccaaacatccgatcactcaa
gtggcgcagtccatgctggacctgtgcgacgctaaactgaaggagaaagaggacaggctg
gtgaggctggagaaagccatcaaccctctgctggatgacgatgatcaagtggccttctcc
ttcatcttggacaacattgtaactcagaaaatgatgattgttcccgattcctggccattt
caccatcctgtcaacaaaaagtttgtgcctgactactataaggttataccaaatcccatg
gatctggagaccatcagaaagaacatctccaaacacaaataccagaaccgagacgcgttt
ctttctgatgttagtctcatccacgccaacagcatcaagtataatggcccagacagccca
tacaccaagacagctctggatataatcagcatctgtaaacagactctggcagagtatgat
gagcacttgacacagctggagaaagacatctgcactgctaaggaggcagctctagacgca
gcagatctcgacggtttcgaatccatgcctgggccttacaccccgcagggacggcacggc
aggagacctggagaagaggagtcagatgtagatatcgaagggtttgaagaggaagatgat
gggaaacccaaaactccagctccagcagaggatgctgaaggggatttggaagatgaagat
gatgatgacgagatgctgctgcctcctcgccggcgagcacacgaccaagatgaggacgaa
gaggagcgagagcataggagatcaagccacccggctcagtccagcgtgctgtatcaagat
ctgctgatgtcagatggagaggatgatgccagcgaagaggagggcgacaatcctttctcc
tccattcagctgtcagagagtggcagcgactccgacagagaggtcaacgtgcgaccgccg
cctccacggagaactcaggagacggcccgcatgggcatggagcaggacgagagcatgatg
tcgtacgaaggagacgggcctgatgggccaactttagaggacagcaacatcagctacggc
agctatgaggagactgagagtcgtagtcagacgcagacatctaccatgataaacggtgaa
gaatacgggatcagtgaagaggaggaggatgaagaagatgaagcacggagaagaggtcca
gctgtgctctcccaggtccagctgagtgaagacgaggagagtgaagagtttagatccatc
ggaggagacagcgacatggactctgacaattaa
DBGET
integrated database retrieval system
