Oryzias latipes (Japanese medaka): 101156900
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Entry
101156900 CDS
T02443
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101156900 (snapc4)
03021 Transcription machinery [BR:
ola03021
]
101156900 (snapc4)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
101156900 (snapc4)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
101156900 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
101156900
NCBI-ProteinID:
XP_011477912
LinkDB
All DBs
Position
9:complement(28113672..28135045)
Genome browser
AA seq
1526 aa
AA seq
DB search
MSASLMAERDRLQEEVENMERALCVTPAEVVLLSSDSDDSDDEAEEDEAGQSAAGLLAQR
EKVQKEIQDLEDMLGSHSPIIVSDEDSSSSSDESDLGLTQSVDSCLQLNLVYQQVMQETL
DQLEVLLKTNQKQQEELIAQMSGPYKESSRGQLARSTYQQPVRMFLGRFLKPYFKDKLTG
LGPPANEETKQKALRMAVYLDDRKLKQKRWESWQKTLLIHSVARDGLKRLIQPKLSKVDY
LSQKLSGAKEADKQSLREQILNLEDEIEQLREKKEEELIGSRYEEHDWQKISNIDFEGTK
EPEDIRLFWQNFLHPSINKKTWSKEEVQQLKEVSARYNNRHWETIAQELGMGRTGFMCLQ
VFQRFVSRSLKRGSWTPEEDALLKELVNKMRIGNFIPYTQISYFIEGRDPTQLLNRWTLN
LDPSLKKGAWTKEEDKLLLRAVSRLGETWWKVRMEVPGRSIMACRERYHDCLKAGLKKGP
FNRKERELLRELVDKHGVGRWAKIAAEIPNRLDCQCLREWKKLTKCPAQRHPRGNGPSRR
AKDRKAGQKTAASKAKKGIRRRLVRVKEEELTEEEDEDEDCVIPYMDSDDEIEKKEREET
ERVEEKPYVIPPMKEWVPTEKAATFSHLCSSLVVLPPMSDGATGKLTRSTILGKCGRSVI
LGPCPRELPWEERHKRNAMIMFTPKQLQVYLTKRAHKVNASGSHQKARSGKRKAKETNQG
VGYELQAAVAPWIGNLLIATTTKVKAVDILRENAERSGYSSTSFFLLLLQAENVDVIGCK
EIIENRKNKVVIKTPTPSPSAVQVTKSVIQILQQRKRQMEQQDVEVDQHSCITQEKKGLQ
SPPLSSSTQLHTQPHNLLHMPPQTPHGPISQIVCIRPQILHNNSSLNFTPFTSRSTALPA
PKIFSPAASQVCQRPNAAALVPSSSQNPAMSSSSVLTGNRAAQSNPSPITAAPSPTISSS
GVMEQMEAEPTAAGSSSSAASLARVKGVDNGTKRDRIKIQELTREPQSRRCGLTWCAAYV
HTSRPSNQTSLNADSLTSSRPPITASSESSALRSSLLADHNYTNLRHYQTSVPLNQINTS
TDKPLKRSVGGRKRQMEVEQLDGERVGDAGAEETQAGKRRRQLSEKGKAHRAALQAKMET
KQKNLSSRSKKSPSKKKVGVQASLEPQPARVCMLPTRAMWVMTPAGLVPMAKPQAVPMTI
LKGPPCLPPQSSLGSPLPPTAPTAQSPQSAGLKAAFVSVPLSTLEPIQPSPAPPTSLSKP
LLVPLNQRSSSRSQSPPNLAGCEGVIKRQSGETSPIRSKGIGFDPSLMFQEPQEKVHDWL
SGRGGVPAGSVALPYLPPFVSTLNMMTALLLAKKSLTQSSLDLLPEGPKPRPPQAQPISK
AASCSDRPPPNKPGSTSDCSGASNQPAEHRAAAPAAGTDEQQREEQVEEEQVRTVRRMVA
ERFSTNPAYQLLKARFLSSFTLPALLATMPQVTNEEMIQEVEDEEQPFVKKKRGQRSGLL
SEDSDVSASHFSGISTTSKPRLSNGS
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttccctgatggcagagcgggacaggctccaggaggaggtggaaaatatggag
cgtgccctgtgtgtgacccctgcggaggtggttctactgagcagtgactcagatgattca
gatgatgaggcggaagaggatgaggcagggcagtctgcagcaggtcttctagctcagagg
gagaaggttcagaaggagatccaggacctggaggacatgcttggatctcacagtcccatc
atcgtgtcagatgaagacagcagcagctccagtgatgagagtgacctcggtctgactcag
tcagtggattcatgtctgcagttgaacctcgtctatcagcaggtgatgcaagagactctg
gatcaactggaggttctgctaaaaaccaaccagaaacagcaggaggagctcatagctcag
atgagtgggccatacaaagaatcttctagaggccaacttgctcgctcgacctatcagcag
ccagtcaggatgttcttgggccgcttcttgaaaccctacttcaaagacaaactgactgga
ctgggtcctccagcaaatgaggaaacaaagcagaaggccctcaggatggcagtatacctg
gatgacaggaagctgaagcagaaacgatgggaaagctggcagaaaactttgctgattcac
tctgttgctcgagatggcttgaagagactcatccagcccaaactctcaaaggtggactac
ttgtcacagaagttgtcgggggcaaaggaagcagataaacagtcactgagagagcagata
ctcaacttggaggacgagatcgagcagctcagggaaaagaaggaggaagagctgattggt
tcacggtatgaagaacatgactggcagaaaatctcaaatatcgattttgaagggacaaaa
gagccagaagacatccgtcttttctggcaaaactttcttcatccgtctatcaataagaaa
acgtggagtaaagaggaggtgcaacaactgaaggaggtcagcgcgagatacaacaacaga
cactgggagaccattgctcaggagcttgggatgggaaggacgggtttcatgtgcctccag
gtgttccagcgtttcgtgtctcggtctctgaagcgaggcagctggaccccagaggaggat
gcgctgttaaaagagctggtgaacaaaatgaggattggaaacttcatcccttacacacag
atcagttacttcattgagggtcgtgatccaacgcagctcctcaacagatggaccctaaat
ttggacccgagcttgaagaaaggcgcttggaccaaagaggaagacaaacttttactgcgg
gcggtttcccgccttggagaaacctggtggaaggtgcggatggaggtccctggacgcagc
atcatggcctgtagggagagatatcacgactgcctgaaggcggggttgaagaaaggacca
ttcaacaggaaggagagagagctgctccgggagctggttgacaaacatggagtcggtcgt
tgggcgaagatcgctgcagagattcctaatcgtttggactgtcagtgcctgagagagtgg
aaaaagctgaccaagtgtcctgctcagcgtcatccgagaggaaatggtccatccaggaga
gccaaggacagaaaagcgggacagaaaacggcagcttccaaagcgaagaagggcatcaga
agacgacttgttcgagtgaaagaggaggaactgacagaggaagaggatgaagatgaggat
tgtgtgataccgtacatggacagtgacgacgagatagagaagaaggaacgcgaggagacg
gagagagtggaggaaaagccgtacgtcatccctcccatgaaggagtgggttcccacggag
aaggccgcgacattctcccacctttgctcctccctggtggttttaccaccaatgtccgat
ggtgctacaggaaaactaacccgatcaaccatcctgggaaaatgtgggcgctctgtgatc
ctaggaccatgtccgagagaattaccatgggaagagagacacaaaaggaatgccatgatt
atgtttacgcctaagcagctccaagtctacttgaccaaacgggctcacaaggtaaatgct
tcaggctcccaccaaaaagcccgctccggcaagcggaaagccaaagagaccaatcagggg
gtcggctatgagctgcaagcggccgtggcgccatggatcggcaacctgctgattgcaaca
acaaccaaagtcaaggctgttgatatcctgagggagaacgcagagaggagcggttactcc
tccacctccttcttcctgctcctgctccaagcggagaacgtggatgtcatcggctgcaag
gagatcattgagaataggaagaacaaggtggtgattaaaactcccaccccaagcccctcg
gccgtccaggttacaaagagtgtcatacaaatccttcagcagaggaagaggcagatggag
caacaggatgtggaggtggaccagcacagctgcataacgcaagaaaagaaggggctgcag
tctcctcctctgtcctcctccacgcagcttcacacccaaccccacaaccttctccatatg
cctccacagaccccccatggtcctatttctcaaattgtttgtattcgtcctcaaatccta
cacaacaattcttccctcaacttcactcccttcacttcccggagcacggctcttcctgct
cctaaaatatttagtcctgcagcttcacaggtttgtcagagaccaaatgctgcagcttta
gttccatcctcctcccaaaatccagctatgtcctccagctcagtcttgactggaaatcga
gctgctcagtccaatcccagtcccattactgctgctcccagccccaccatcagctcatct
ggagtcatggagcagatggaggcggagccaactgctgcaggcagcagttcttctgctgcg
tccttggcacgagtgaaaggggtggataatggcacaaaacgggacagaataaagattcaa
gagctgactcgggaaccccagtcacggagatgtggacttacatggtgtgctgcatacgtt
catacctccagaccttccaaccagacgtccttgaatgcggacagcctaacttcttcccgt
cctcccatcacagctagcagtgaatcctcagctctccgatcatctctgctcgctgatcat
aactacaccaacctccgccattaccaaacctccgttccccttaaccagatcaacacctcc
actgataaacccctaaaacgttcagtcggaggaaggaaaaggcagatggaggttgagcag
ctggatggggagagagtgggtgatgctggtgcagaagagacccaggcagggaagaggcgt
cgccagctgagtgagaagggcaaagctcaccgggcggctttgcaggccaagatggaaacg
aaacagaagaacctctcctctcgtagcaagaagtctccttcaaagaagaaagtcggcgtt
caggcctctttggagcctcaaccagccagggtgtgcatgttacccactcgggccatgtgg
gtcatgaccccagccggactggttccgatggctaaaccacaagctgtgccgatgacgata
ctcaaaggccccccctgcctccctccccaaagcagtttaggctctcctctgcctccaacc
gccccaacagctcaaagccctcagtctgccggactgaaggcagcatttgtgtctgtacct
ctctccacccttgagcccattcagccttcacctgccccgcccacctctctctcaaagcca
cttcttgtgcctcttaatcagaggtcctcctcccggtcacagtctcctcccaaccttgca
ggttgtgaaggtgtgataaaaaggcaatcaggtgagacttctcccatcagaagcaaggga
atcggctttgacccctccctgatgttccaagagcctcaagaaaaagttcacgattggctg
agtggaagagggggggtgcctgctgggagtgtagctttgccatacctgcccccctttgtc
agcactctaaacatgatgactgctctgctgctggctaagaagtccctgacgcagtcctca
ctggacttgctccctgaaggtcccaaacccagaccaccccaagcccaacccatatctaaa
gctgcgagctgctccgaccgccctccacccaataagccaggttccacctcagactgtagc
ggagccagcaaccagcctgcggagcatagagctgcagctcccgccgctggtaccgacgag
cagcagagagaagagcaggtagaggaggagcaggtgaggacggtgcgtcggatggtggcg
gagcgcttttccactaaccccgcctaccagctgctcaaggcccgcttcctgtcctccttc
actcttcctgccctcctggcgacgatgccgcaagtcacaaacgaggaaatgatccaggag
gtggaggatgaggagcaaccgtttgtaaagaagaagagaggtcagagatcagggctgctg
tctgaggactctgacgtttctgccagtcacttctcagggatcagcaccaccagcaagccg
cgcctctccaatggaagctaa
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integrated database retrieval system
