KEGG   Oryzias latipes (Japanese medaka): 101156957
Entry
101156957         CDS       T02443                                 
Symbol
zranb3
Name
(RefSeq) DNA annealing helicase and endonuclease ZRANB3 isoform X1
  KO
K25861  DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ola03032]
    101156957 (zranb3)
   03400 DNA repair and recombination proteins [BR:ola03400]
    101156957 (zranb3)
DNA replication proteins [BR:ola03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    101156957 (zranb3)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    101156957 (zranb3)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HNH ResIII Zn_ribbon_RanBP HNH_5 DEAD ERCC3_RAD25_C Flavi_DEAD
Other DBs
NCBI-GeneID: 101156957
NCBI-ProteinID: XP_020564302
UniProt: H2LHF6
LinkDB
Position
2:17689419..17864638
AA seq 1109 aa
MFQRSDPPEDHSPVEMADDGGSSSCRAGRWSQQLSGLPNKLLQRLMPFQREGVEFALSLN
GRCMIADEMGLGKTVQAIAVAYAYRQEWPLLVVVPSSLKYPWIEELERWIPELQPGDINL
VENKSQTTGICSSKVTVLGYGLLTTDARPLVEALTRQRFSVVVVDESHYLKSRNAARTKI
LVPLIQSANRAILLTGTPALGRPEELFMQIDALYPRRFGTWTDYAKKYCNAHYRYFGPRR
QWDCRGASNLEELHRRLSQIMIRRLKADVLTQLPPKIRQRIPFDLPKEAAKEAAASFAEW
ERLMKGLGSGVADNPFTEVMSLVTQMYKQTAIAKAGAVKDYIKMMLEAEQLKFLVFGHHL
TMLQACTEAAIEAKAGYIRIDGSVPASERNQLVHKFQNDPEIRVAILSIQAAGQGLTFTA
ASHVVFAELYWNPGHIKQAEDRAHRIGQTSSVNVHYLIAKGTFDTVMWSMLNRKETVTGS
TLNGRKEYLKADEGDKDKWEFLNFADLWKPTEMVLPLEGNSGKANDDIFFSHFEKEKQHD
IRSFFSPSANKDKKRRRREDGEASSIPSEVNCDDEDSNSLPLDQDFSPQLKRLRTPRPRA
SPLSRAGLRSPAVSMVAPRKPSETDVVSTWNCGACTYSNSGLLPYCEMCEFPRSASAPKT
DPPPPAATDPGPDRPPGSGQERQGKVKQEEEGSPKDKQKVGEAEEEDEQRLKGKHSSGER
VDGSGDLPPDHTHDCRAVACLFSASDANGDDEGRGGDDASTTQPVYPGLRFCASQYTDRI
YLYSKDAVPLNLSFIPLDIKLTNWDDLPEAFSQHQENRIQVLKVVQEWSGLPAMKQKLLR
RSGLLFHSPSLGLQELTAAQRPHSSTKRYLSRDEVALASLSKAQQEGGSVRLVTKENFFT
KRKSACWRAAAAAESSNDEQPSAATDRPPPTEAGYLQATDSCGVPLCLSCQQACLTTGGP
WDTRFCSNNCEKEFLLRSSQTYMRSQVLEAEKGVCQHCGLHAHDLFLKIRDAPPSQRKEM
LENTWLAQLPLKQLNEMIRAPVEGDFWQVDHIRPVYSGGGQCSLDNLQTLCTVCHKSRTA
QQARERSQMRKSAAASKVASDITQFFFKK
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgtttcagcggtccgatccgcccgaggaccactcaccggtcgagatggcggatgatggc
ggatcgagctcctgccgggctggaagatggtcacagcaactgtcaggacttcctaacaag
ctcctgcagcgtctgatgcccttccaaagagagggtgtggagttcgccttgtctctgaac
ggacgatgcatgattgctgatgagatgggtctcgggaagacggtgcaggccatcgcggtg
gcatatgcctacaggcaggagtggcctctgctggtggtggtgccatcctccctcaaatac
ccctggatcgaggagctggagaggtggatcccggagctgcagcctggagacatcaatttg
gtggagaacaagagccaaaccacggggatctgcagctcaaaggtgacggtactgggttac
ggcctgctcaccacagacgcgcgccccctagtggaggctcttaccagacagcgcttctct
gtggtggtggtggacgagtcgcattacctcaaatcccggaacgctgctcgaacaaaaatc
ctggtacctctaattcagagtgcgaaccgagctattctgttgaccggaactccagccctg
ggccgacccgaagagctttttatgcagatcgacgccctctatcccaggaggtttgggacc
tggacagactatgccaagaaatactgcaatgcccattacaggtactttgggcctcgcagg
cagtgggactgccgcggggcgtccaacctggaggagctgcaccggcggctgagtcagatt
atgatcaggcggctcaaagctgacgtcctcactcagctgccccctaaaatccgccagcgc
atcccttttgacctgccgaaggaggcagcaaaggaagcggcggccagctttgccgagtgg
gagaggctgatgaagggcctgggatcgggggtcgcagacaaccccttcacagaggtcatg
agcctggtgactcagatgtacaagcaaaccgccatcgccaaggcgggagctgtgaaggac
tacattaagatgatgttggaggcggagcagctgaagttcctggtgttcgggcaccacctt
accatgctgcaggcctgcaccgaagctgccatcgaggccaaggctggttacattcgaatc
gatggcagtgtaccagcatctgagcgaaaccagttggtccacaagttccagaatgaccca
gaaatccgcgttgccattctgagcatccaagctgctggtcagggtttgaccttcaccgcc
gccagccatgtggtgtttgccgaactgtactggaaccccggtcacatcaagcaggcggag
gatcgcgcccaccgcatcgggcagacgtcctccgtcaacgtgcactacctgatcgccaag
ggcacctttgacaccgtcatgtggtccatgctcaacaggaaggaaactgtgactggcagc
actctaaatgggaggaaggaatacctgaaggccgacgagggggacaaggacaagtgggaa
ttcctcaactttgctgacttatggaagccaacagagatggtgctgccactggagggaaac
tcgggaaaagccaacgatgatattttcttcagtcattttgagaaagagaagcagcatgac
attcgttccttcttctccccgagcgccaacaaggataagaagaggaggagaagggaggac
ggagaggcgtcttccatcccctcagaggtgaactgtgacgacgaggacagcaactcttta
cccctcgaccaagacttttccccacagttgaaaagactgcgaacgcctcgacccagagcg
agtcctctgtcgcgggcgggattaaggagtcctgcggtctcaatggtggcccctcggaag
ccgtcagaaactgacgtggtgtcgacgtggaactgtggggcctgcacctactcgaacagc
ggcctgctgccttattgcgagatgtgcgagttcccacgctcagcctcggcccccaaaaca
gatccgccaccacccgcagcgaccgatccaggcccggaccgcccgcccggctccggccag
gagcggcaggggaaagtcaaacaggaggaggagggatctcctaaagacaaacagaaagta
ggagaagcggaggaagaggacgaacagaggctcaaaggcaaacattcatccggagagaga
gttgacggcagtggggacctcccccctgaccacacacacgactgcagagccgtggcgtgt
ttgttttctgcttctgatgctaatggcgatgatgagggcaggggtggagatgacgccagc
accacccaacccgtctacccaggacttcggttctgcgccagccagtacacagaccgaata
tatctatactctaaggacgcagtgccgctgaacctgagcttcatccctctggacatcaaa
ctaaccaactgggacgacctgccggaggccttcagccaacaccaggaaaatcgaatccag
gtgttgaaggttgttcaggagtggagtggccttccagcgatgaagcagaagctgcttcga
cgcagtggcctcctcttccacagccccagcctgggcctgcaggagctgaccgccgcgcag
cggccccactccagcaccaagaggtacctcagcagggatgaggttgctctggcctccctg
agcaaagcccagcaggaaggaggcagcgtccggctggtcaccaaggagaacttcttcact
aagaggaagtctgcgtgttggcgagcagcagccgctgcagagagttcgaatgacgagcag
cccagtgcggcgacggaccggccgccgccaacagaggccggatacctccaggccacagac
agttgtggcgttcctctgtgtctgtcatgccagcaggcctgcctcaccactggggggccc
tgggacactcgcttttgtagcaacaactgtgagaaggagttcctgttgcgctcgagccaa
acgtacatgcggtcccaggtcctggaggcggagaaaggagtttgtcaacattgcggcctc
cacgcccacgatctgttcctgaagatccgtgacgctcctccctcccagagaaaggagatg
ctggaaaacacctggctggcccagctgcctctcaaacagctgaatgagatgatccgggct
ccggtggagggggatttctggcaggttgaccacatccggccagtgtacagcggaggagga
cagtgctccctggataacctgcagacgctctgcacggtctgccacaaatctcggacggcg
cagcaggccagagaacgtagccagatgaggaagagtgctgctgcttccaaggttgcgtca
gacatcacccaattcttcttcaagaaatga

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