Oryzias latipes (Japanese medaka): 101157030
Help
Entry
101157030 CDS
T02443
Symbol
lgr5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101157030 (lgr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ola04030
]
101157030 (lgr5)
G protein-coupled receptors [BR:
ola04030
]
Rhodopsin family
Others
R-spondin
101157030 (lgr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRRNT
LRR_EndoS
LRR_LRWD1
LRR_R13L1-DRL21
LRR_Zer-1
DHU1_N
EpCAM_N
Motif
Other DBs
NCBI-GeneID:
101157030
NCBI-ProteinID:
XP_023807994
UniProt:
A0A3B3I0Y3
LinkDB
All DBs
Position
23:23089622..23129585
Genome browser
AA seq
909 aa
AA seq
DB search
MRGFHALFAALVLLPAGLRGSEGPGGAAAGVRVDGSGDAEAGRASCPGRCRCELDGLLLR
VDCSDLELRAVPSDLSVFTSYLDLSMNNMTLISAGALSSLHFLQELRLPGNDLSFIPKGA
FAGLYNLKVLMLQNNQLRSVPAEAFNNLHNLQSLRLDANHISGVPAGSFSGLRSLRHLWL
DDNALTEVPAEALSELPALQAMTLALNHIRHVPDHAFSALGRLVVLHLNNNRIVSMGTNC
FHGLHSLETLDLNYNQLMEFPTAIRSLRHLKELGFHSNKIQSIPDHAFTGNPSLTTVFFY
DNPIQSVGRTAFQNLPELRTLSLNGAAELNEFPDLTGTRSLESLTITGARITSLPTSVCE
QLPNLQLLDLSYNQIQSLPSFSACESLQKLDLHHNEVEALEENTFTGLTSLRFLDLSWNR
LSTVKPNGFSALPALNRLDLSSNQLSSLPLSGLQTLTHLRLAGNGQLMELIAREDLPRVR
WMELPYAFQCCAFISCDRKGGSSWEKEEAVEAAGRDAAVLSSQAEPDWEDFLMEFEDGPK
PQHAVHCSPTPGPLRPCRHLLGSWMIRGGVWLMAGTSLISNSLVVLAVFFSPASLVTPTK
LLIGLLALVNGLMGVWGGWLAAVDAWTFGSFWRFGAKWESSFLCHLSSFLCVFASQTGLF
LLTVAALERCVASAVRSGGRSAGWPLWIRLSICLCFLLGAAITLPPLVAGNSSTSFCLPL
PSVSSSLAFSVSMVLFDSLCFLLMTLAYIRFYCQSSKAAPACDEEAALTRHVAWLLFSDC
LLYLPVAFLSFSSLLRLPAVGPEAAKALLLLVAPLPACVNPLLYLLFNPLAREELASLAK
RTCRGVAPSKLWRRAKARGSTLDSDYDEDVEKQSCDSTQGLVAVEHLKEEEESRGAKGLH
SAEAAGLHH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggttccacgctctgtttgcggcgctcgtgctcctcccggccgggctgcggggc
tccgaggggccgggcggcgcggccgcgggagtccgcgtggacggttccggggacgccgag
gcgggacgggccagctgcccgggccgctgtcggtgcgagctggacgggctgctgctccgc
gtggactgctcggacctggagctccgcgcggttccgagcgacctgagcgtcttcacatcc
taccttgacctcagcatgaacaacatgacgctgatttctgcaggagctctttccagcctg
cacttcctgcaggagctacgtctgcctggaaacgatctgtccttcatccccaaaggagcg
ttcgccggcctctacaacctcaaagtgctaatgctccagaacaaccagctgagatctgtt
cctgctgaggccttcaacaacctgcacaacctgcagtcactgcgtctggatgccaaccac
atctccggcgtcccggccggctccttctccggcctgcgctcgctgcggcacctctggttg
gacgataacgccctgaccgaggttcctgcggaggctctgagcgagctgcccgctctgcag
gccatgacgctcgccctgaaccacatccgccacgttcccgaccacgctttcagcgcgctg
ggacgcttggtggtgctgcatctcaacaacaataggatcgtttccatgggaaccaactgc
ttccacggactccacagtttggagacgctggatttgaactacaaccagttgatggagttt
cctacggccatacgctcactccgacacctcaaagagctaggtttccatagcaacaagatc
caatccatccctgaccacgcctttactgggaacccatcgttgaccactgtattcttctac
gataatccaatccagtctgttggacgtacagcttttcagaacctgccagagctacggact
ttatccctgaacggagcggcagaactcaacgagtttccagatctgacgggaacgaggagt
ttggagagtctgaccatcaccggagctcgcatcacttctctgcccacatcagtgtgtgaa
cagcttcccaacctgcagctgctcgacctctcctataaccaaatccagagcctgcccagt
ttctctgcctgtgagagcctccagaaactagacctgcaccacaacgaggtggaggcgctg
gaggagaacaccttcaccggtctgacatcactgcgcttcctagatctctcctggaaccgg
ctgtcgaccgtcaaacccaacggcttctctgctctgccggcgctgaacagactggatctg
tcatccaatcagctgtcatctctgcccctgagcggcctgcagaccttgactcaccttcgc
ctggccggtaacggtcagctgatggagttaatcgcacgagaggacctgccgcgggtcagg
tggatggagcttccctacgcctttcagtgttgcgccttcatctcctgtgacaggaaagga
ggttcgtcctgggagaaggaggaggctgtggaggcggctgggagagatgccgccgttctc
tccagtcaagcagaaccggactgggaggactttctgatggagtttgaggacgggcccaaa
cctcaacacgccgtccactgcagcccgacaccaggtccgctgaggccgtgtcgccacctg
ctgggcagctggatgatccgcggcggggtgtggctcatggcaggaacctccctgatcagt
aacagtctggtggttctggccgtcttcttctctcctgccagcttggtgacgcccaccaag
ctgctgattggtctgctggctctggtgaatgggctgatgggagtttggggggggtggctg
gccgctgtggacgcctggacctttggaagcttttggaggttcggagcgaagtgggagagc
agcttcctgtgtcacctcagcagcttcctgtgcgtctttgcgtctcagaccggactcttc
ctgctgactgtcgccgctctggagcgatgcgtggcgtccgccgtgcgcagtggcggtcgc
tctgccgggtggccgctctggatccgtctgtccatctgtctgtgtttcctgctgggcgcc
gccatcacgctgccccctctagtggctggaaacagcagcacctccttctgtttgccgctg
ccgtccgtgtcctcctccttggcgttctccgtgtccatggtgctgtttgactcgctctgt
ttcctcctcatgacgctcgcctacatccgtttttattgtcagagcagcaaagcagctcct
gcgtgtgacgaggaggcggcgctgacccgacacgtggcctggctgctgttttctgactgc
ctcctctacctccctgttgccttcctctccttctcctccctcctgcggctccccgccgtc
gggccggaggcggcaaaggcgttgctgctgctcgtggcgccgctgccagcctgcgtcaat
cccctgctttacctcctcttcaacccgctcgccagggaggagctggcgtcgctggccaaa
cgcacgtgcagaggcgtggcgccatccaagctatggaggcgagcgaaggctagaggaagc
acgctggattcagactacgacgaggatgtggagaaacagtcgtgcgactccacgcagggg
ctggtggctgttgaacatttgaaggaggaggaggagtcgagaggagcaaaaggcctccat
tcagcggaggctgctggccttcatcactaa
DBGET
integrated database retrieval system
