Oryzias latipes (Japanese medaka): 101157073
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Entry
101157073 CDS
T02443
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101157073 (robo1)
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
ROBO family
101157073 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
101157073
NCBI-ProteinID:
XP_023817589
LinkDB
All DBs
Position
13:complement(9337482..9585182)
Genome browser
AA seq
1701 aa
AA seq
DB search
MLYSLLAACLCRGCFAQELWTVDVDTEKVAFNSSVPVVLLLTETGVAHDGTSEGATPAPA
SEHEEDNSLGYTGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDG
ERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEV
AILRDDFRQNPADVMVAAGEPAVLECQPPRGHPEPTISWKKDGVNIDDRDERITIRGGKL
MITNARKSDAGKYVCVGTNMVGERDSEVAELTVLERPSFVRRPGSQVVLVDQSVEFRCEA
RGDPVPTVRWRKDDGELPKGRYEIREDHTLKIRRLTSADVGSYTCVAENMMGKAEASATL
TVHVVSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPS
SRFSVSQTGDLTITDAERSDMGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVIRQGPT
NQTVPVDGTVDLNCMAAGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGT
YTCIASTPSGEASWKSFVEVQEFGSPIQPHRPTDPNLIPSAPSKPEVTEVTRTSVTLSWK
PNLNAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGL
SDPSPITDAVKTQDIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQ
YTQGYRVMYRPSPEGPQKSEWSVFEVRAPTEDSAVVTQLRKGVTYQFKVRPFFNEFQGTD
SDVKIGKTLEEAPSAPPRKVTVTESGDNGTAIIVSWQPPPEEDQNGVVQEYKIWCLGNES
RYHINRTVDGSTFSVLIPSLAPGIRYSVEVAASTGAGPGVKSDVTFFQLDSSGRMTGDPV
DPENPLSQQISNVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPS
FTFTPTVAYQRGGEGVTSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSINCCTAGNG
NSDSNLATYSRPADCIANYNSQMENKQTNLLVPDTGVYGDVDLSNKINEMKTFNSPNLKD
GRFVGPGGQPTPYATTQLIQSSILGNNMNPDRGTGGSGGGLGGGGEMNEKHCWKPVSIQQ
QKQEMGSQLQYSIMEQNRLNKDRYRGGDSPMPATIPYNQTHESHTGGSYNSSDRGSSSTS
GSQGHKKGVRTPKLPKQSTMNWADLLPPPPANPPPSRSTEEYSLSMDESCDPDMQCPMPP
SHMYLQPDELEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDAQ
DSHERRRHVVSPPPPPRPLSPSHTYGFISSPLGLDTDGMEEEGIMEEDEEDGDETDAEVA
KMHFHHTHPHHPQMHARRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSGR
SSAVSSSDGSFFTDADFAQAVVAAAEYSGLRVGKHPNSQGQEAGGAPAPKYQISQSSHRP
SSPVSTDSNMSMAAIQRRPPKKLKQHSAGHLGNQRREAFSEDLPPPPIPPPAVLKSPTHP
SKAALEGRGIISPKAGDVRDKRRGPGGYRPQESFETRPSSSERKDGQDRQKSALGGKGSK
TESGSGIKSRQHPGSEDILPYSRPQFPGVNSPRDPSSSSSMSSRGSGGRRREGSRRNPAE
MGLNSSGAFHPGDDELEIAES
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgctttacagtctgcttgccgcctgcctgtgcagaggatgctttgctcaggagttgtgg
accgtggatgtggacactgagaaggttgcattcaattcctcagttcctgtggtgttattg
ttgacagagacgggagtcgctcatgatggaaccagcgaaggagcaacaccagctcctgcc
tctgaacatgaagaagacaactctttgggctacacaggatctcgtctgcggcaagaagac
accccacctaggattgtagagcacccatcagacctgatcgtttccaaaggggagcctgcc
acactcaactgtaaagcagaaggacggccaaccccaacggtggagtggtataaggatgga
gaacgggtggaaacggatagggacaatccccgctctcagcgcatgctgcttccaagtggc
tccctcttcttcctgcgcattgtccacggacgacgaagcaaacctgatgaaggctcctac
gtttgcgttgctcgcaactatctgggtgaagcagtgagtcacaatgcctcgctggaagta
gccattctacgcgatgacttcagacaaaaccctgctgatgtgatggtggcagctggagaa
cccgcagtcctggagtgccagccccctcgtggacatcctgaacccacaatatcatggaaa
aaagacggagtgaatattgatgacagagatgaaaggatcactatccgaggagggaagctg
atgatcacaaatgcccgaaagagtgatgctgggaaatatgtgtgcgtcggcaccaacatg
gtcggcgagcgggacagtgaagtggctgaacttacagttctggagcggcccagctttgtc
cgccgccctggtagtcaggtggtgttagtggatcagagtgtggagttcagatgtgaggcc
cgtggcgacccagttcccactgtgcgctggagaaaagacgatggcgaactacccaaagga
agatatgagattcgtgaggatcacaccttgaagattcgtcgtctgacctcagcggatgtt
ggttcttacacctgcgtggcggagaacatgatgggcaaggcagaggcgtcggccacgctc
accgtccacgtcgtgtctgtgcccccagcatttgtggtgagaccacggaaccaggttgtt
ggagttggcagaactgtcaccttccagtgcgaggccactgggaacccacaaccagctatt
ttctggcagcgagaagggagtcagaatctcctgttctcctaccaaccccctcaaccatca
agccgattttctgtgtctcagaccggagacctgaccatcactgatgctgagcgctcagac
atgggatactacagctgccaggcactcaacattgctggcagtgtgattaccaaagctctg
ttggaggtcactgatgttgtgtctgaccggccgccaccagttatacgacaaggtccaacc
aatcagacggtgcctgtggacggtactgtggatctaaactgtatggcagctggtaacccc
actcccaccatcctgtggaggaaggacggtgtcttggtgtctacccatgactctagggtc
aaacagctggacacgggcgccttgcagatacgctatgcaaagcttggtgacactggtact
tacacctgcattgcctccacacccagtggagaggcctcctggaagtcctttgtagaagtc
caagaatttggttctccaatccagccacacagacctaccgacccaaatctgattcctagt
gccccttcaaaacccgaggtcacagaagtaactcgaacctctgtcaccctttcatggaaa
cctaaccttaacgccggagccacacccacttcctacattatagaggctttcagtcatgct
tcagggagcagctggcagactttggcagagcatgtgaaaactgaatcgtttgtattgaaa
ggcctgaagccgagtgcagtctacctctttttagtgagggcagctaatgcttacggactg
agtgaccccagtcctatcactgatgctgtgaaaacacaagatatccctcccaccagtcaa
ggtgttgaccatcgtcagatccaaagggagctgggagaagtggtcatccacctgcataac
cccaccattctttcatcctcatcagtcagggtgcaatggacagtggagcagcagtcccaa
tacacccagggctacagggtgatgtacaggccgtctccagagggcccccagaagagcgaa
tggtctgtgtttgaggtgcgggcccccacagaggacagcgccgtggtcacgcagctccga
aagggcgtcacgtatcaattcaaagtgcgtcccttcttcaatgagttccaaggaacagac
agcgacgtcaagattggcaagaccctggaggaagcccccagtgcccctccccgtaaggtt
acagtgacagagagtggggacaatgggactgccatcattgtctcttggcaaccccctcca
gaagaggatcaaaacggggtggtgcaagagtacaagatttggtgcttggggaatgagagc
aggtaccacatcaaccgcacagttgatggctcgaccttttctgtgctgattcccagtctg
gcccctgggatccgttacagcgtggaagtagcagccagcaccggagcgggtcctggggtg
aagagcgatgtcactttcttccagcttgattcctctggtcgaatgacaggagacccggtg
gacccggaaaaccctctgtcccagcagatctctaatgtagtcaaacagcctgcatttata
gcaggcattggagctgcttgttggatcatcctgatggtcttcagtatctggctgtaccga
catcgaaagaagaggaatggcctctccagcagttatgcaggcattcggaaagtgccatcg
tttaccttcacgccaacagtggcgtatcagagaggcggagagggtgtcaccagtgctgga
agacccggtttgctaaacattggggaatctgccactcagccctggctggctgacacatgg
cccaactcctgctccaaccacaatgactgcagcatcaactgctgcactgcaggcaacgga
aacagcgacagcaacttggcgacgtacagccgaccagcggactgtatcgccaattataac
agccagatggaaaacaagcagaccaacctcttggtaccagacacaggagtttatggagat
gtggacctgtccaataagatcaatgagatgaagaccttcaacagcccaaacctcaaagat
ggacgctttgtaggtcctggcggtcagccgacaccttatgccaccacccagctcatccag
tcctccatcctgggcaacaacatgaatccagacagagggaccggagggagtggaggtgga
cttgggggaggaggggaaatgaatgagaaacactgctggaaacctgtctcaatacagcag
cagaaacaggaaatgggctcccagctgcagtacagcattatggagcaaaaccgactaaac
aaggatcgctatagaggaggtgacagtcccatgccagccaccatcccctacaaccagacc
catgaaagccacactggggggtcctacaacagctctgacagaggcagcagcagcacgtca
ggtagtcagggtcataagaaaggagtgcgcacccccaaactacccaaacaaagcacaatg
aattgggctgaccttctgcctccccctcctgcaaacccacccccgagtcggagcacagag
gagtactctctgtcgatggatgaaagctgtgatccggacatgcagtgccccatgccccca
tctcacatgtacctgcagcccgatgagctggaggaagaggaggagatggaaagagggccc
actcctccaatccgtggggcggcctcttccccagctgcagtgtcctacagtcaccagtcc
actgccactcttaccccttcaccccaggaagagatgcaaccaatgctccaggatgctcag
gacagccacgaacgccggcgccatgttgtgagccccccaccacctccaagaccactctcc
ccctcacacacgtacgggttcatcagcagcccgttggggttggacactgatggaatggag
gaggagggtataatggaagaagacgaagaggatggtgatgagacagacgctgaagtagcc
aagatgcacttccatcacacacacccccaccaccctcaaatgcacgcacgaaggttgtta
ctacgagggcttgaacagacaccagcatccagcatgggtgatctggagagctcagtgacc
ggctccatgatcaacgggtggggctcggcctctgaggaggacaatgtttcgtcagggagg
tccagcgctgttagctcctcagacggatccttcttcacagatgccgattttgctcaagcg
gttgttgctgctgcagagtattcaggcctcagggtgggaaagcacccaaattcacaaggc
caggaagcaggaggagctccagcgccaaaataccaaataagccagtcaagtcaccgtccc
agcagcccggtgtctacagacagtaatatgagcatggctgctatacaaaggaggcctcca
aaaaagctaaaacagcactctgcgggtcacctagggaaccaacgacgtgaggccttcagt
gaagatctgccacccccgcccattcctcctccagcagtgctcaagtcccccacacatccg
tccaaagcagctctggagggcagaggaatcatatccccaaaagccggtgatgttcgtgac
aagcgaagaggacctggtggctacagaccccaagaaagctttgagaccagacccagctcg
tctgagcgcaaagacggccaggacagacaaaagtctgctctgggagggaaaggcagtaaa
actgagagtggctcaggcatcaaatcacggcagcatccaggatcagaagacatcctaccc
tacagccggccccagttccctggcgtcaacagtcccagagatccaagttcctccagttct
atgtcatccaggggttctgggggccgacggagagaaggaagccgaagaaatcctgcagaa
atgggtcttaacagctctggagcctttcacccaggagatgatgaactagagatagcggaa
agctga
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integrated database retrieval system
