Oryzias latipes (Japanese medaka): 101157113
Help
Entry
101157113 CDS
T02443
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101157113 (tmc6)
03037 Cilium and associated proteins [BR:
ola03037
]
101157113 (tmc6)
Transporters [BR:
ola02000
]
Other transporters
Pores ion channels [TC:
1
]
101157113 (tmc6)
Cilium and associated proteins [BR:
ola03037
]
Other cilia and associated proteins
Stereociliary proteins
101157113 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF6821
Motif
Other DBs
NCBI-GeneID:
101157113
NCBI-ProteinID:
XP_011477534
UniProt:
H2M9Y7
LinkDB
All DBs
Position
1:complement(28965999..28990044)
Genome browser
AA seq
829 aa
AA seq
DB search
MAGNFDLNQPLMGAGLESPADEEGVHVSFSQLIAEQIGESPDGFELQQLQRALNDEDRDY
VGELGSAFEYPGRGLNDMEGEDDDGGETDPQDGLPWSSATLKILSSMPSRTIGRSRGAIL
SQYYNKTLQLRRRGQSRSSLRDFSRSSRPTIRGYGMEVDTTDGPESEMKKKKERLVNNLQ
NLSVGERLKMLRGMPVSVAEKKELRRLTLQKDKPPPSSSKIPCCSQLKFYIIIAARHSWY
SWLSFLHSLQPWQFLFKRIGGRFGTGVLSYFQFLKTLLLFNVFLFLVTFAFLVLPQAMHP
TELPVGVRTFSGLELISGAGLFTDTVMYYGYYSNSTLQKSCAREHNASASTDHDCVSERL
SYNMPLAYFFTIGMSFFITCIILVYSMSKSFGRSFRIDKSYSILAMKVFSSWDFRVIKKS
SVELMSQNNCTQLREILAEVVQKKEKNGGCQALWRLMVHGLAWAICIGGTAGCVISVYFF
SEYMHQDLQRTSRQTNTHPLLKEASLLALPALVSLLNLLLPSLFSLAAWMEEYHSPSVRT
YVALGRNLMLKVSVLAVLCYHWLGRVAANPSDINLMCWETFVGQELYRFLIMDFIFTLLN
TLFGELLWRLFSRNVLRRSRNPAFDIARNVLDLIYAQTLAWIGVLFSPLLPAVQILKLLL
LFYVKVTSVMMNCQVPRRPYRVSQMTTIFITLLCFPSFLGASVCVTYTMWSIKPSSSCGP
FRGLRTMFQAGKRWVQELEKNNPDLSVLARVHAYLVENPFFLFVGAGIFLIVIYFYSQVV
DGQRKVIELLQEHIEEEGAHKKYLISKLQNMHESKKRIPRRLRSQDSGC
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaactttgacctgaaccagcctctcatgggggccggcctggagagcccagca
gacgaagaaggagttcatgtcagcttcagccagctgattgcagaacagattggagaaagt
cctgatggatttgagctgcagcagctgcagagagctctgaatgatgaggacagagattat
gtgggcgagttggggtctgcatttgagtatccggggcgggggctaaatgacatggaaggg
gaggatgatgatggaggagaaacagacccacaggacggtttaccctggtcctctgccacg
ctgaagatcctgtcctccatgcccagccgcaccatcggccgcagcaggggggccatcctc
tctcagtactacaacaagaccctgcagctccggaggcgcggtcagagccgctcgtccctc
cgagacttctcccgctcctcccggccaaccatacgaggctacggcatggaggtggacaca
acggacggaccagagtctgagatgaagaagaagaaggagcgcttggtgaacaacctgcag
aacctctccgtgggagagagactgaagatgctgcgagggatgcctgtgagcgtggctgag
aaaaaagagctgaggaggctaacattacaaaaggacaagcctcccccctccagcagtaag
attccctgttgcagtcagctcaagttttacatcatcatagcggcgaggcacagctggtac
agctggctgtccttcctgcactccctccagccgtggcagtttctgtttaagagaatcgga
ggccgctttgggaccggagtcctctcctacttccagttcctgaagaccctcctcttattc
aacgtcttcctattcctggtcacgttcgctttcctggtgctcccccaggcgatgcaccct
acagagctgcctgtgggggtgcgaaccttctctgggctggagctaatcagcggagcgggg
ctcttcaccgatacggtgatgtactacgggtactacagcaactccacgctgcagaagagc
tgtgcgagagagcacaacgcgtccgcctccaccgaccatgactgtgtgtccgagcgcctc
tcctacaacatgccgctcgcctatttcttcaccatcgggatgtcgttcttcataacctgc
atcatccttgtgtacagcatgtccaagtcgttcggccgcagtttccgaattgacaaatct
tacagcatcttggccatgaaggtcttcagctcctgggactttagggtcatcaagaagagc
tccgtggagctcatgtctcaaaacaactgcacacagctgagggagatactagcagaggtg
gttcagaagaaggagaagaacggtgggtgccaggcgctgtggcggctgatggtccacggg
ctggcgtgggcgatctgcattggaggcactgctggctgtgtgatcagcgtttacttcttc
tctgaatacatgcaccaggatctgcagcgaacgtcccgtcagaccaacacacacccctta
ctgaaggaagccagcctgctggctctgcctgctctggtgtccctcctcaacctgctgctg
ccgagcctcttcagcctggccgcctggatggaggagtaccactctccgtctgtgcgcaca
tacgtggctctaggacgaaacttgatgctgaaagtgagtgtgctcgctgtcctctgttat
cactggctgggtcgggtggcagccaatcccagcgacattaacctcatgtgctgggagacg
tttgtgggtcaggaactgtaccgcttcctcatcatggacttcatcttcacgcttttgaac
acgctgtttggagagctgctctggaggttgttttctcggaacgtgctgaggaggagcagg
aatccggcgttcgatatcgcccggaatgttctggacctgatctacgcacagacgctggcc
tggatcggcgtcctcttcagccctctgctgccggccgtgcagatcctcaagctgctgctg
ctcttctacgtcaaagtgaccagtgtgatgatgaactgtcaggtcccccggaggccctac
agagtcagccagatgaccaccatcttcatcaccctcctctgcttcccctccttcctgggt
gcatctgtgtgtgtaacttacaccatgtggagcatcaaaccctcttcctcgtgtggcccg
tttcgggggctcaggaccatgttccaggccgggaaacgctgggttcaggaactggagaag
aataatcccgacctttccgtgctcgccagggtgcacgcctacctagtggaaaacccgttt
tttctgttcgttggagcaggcatcttcctgatcgtgatctacttctacagccaggtggtg
gacggccagaggaaggtcatcgaattgctgcaggagcacatagaggaggagggagcgcat
aaaaagtacctaatctctaaacttcagaacatgcatgaaagcaaaaagagaatccccaga
agactcaggagtcaggactctggctgttga
DBGET
integrated database retrieval system
