Oryzias latipes (Japanese medaka): 101157145
Help
Entry
101157145 CDS
T02443
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101157145 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ola01007
]
101157145 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ola03016
]
101157145 (farsb)
Enzymes [BR:
ola01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
101157145 (farsb)
Amino acid related enzymes [BR:
ola01007
]
Aminoacyl-tRNA synthetase
Class II (U)
101157145 (farsb)
Transfer RNA biogenesis [BR:
ola03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101157145 (farsb)
Prokaryotic type
101157145 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
B3_4
EF-1_beta_acid
Arc1p_N_like
GST_C_6
EAD7
Motif
Other DBs
NCBI-GeneID:
101157145
NCBI-ProteinID:
XP_004075515
UniProt:
H2LYY4
LinkDB
All DBs
Position
13:complement(18565743..18579065)
Genome browser
AA seq
846 aa
AA seq
DB search
MPTVGVKRDILFSALGRSYTDEEFDELCFEFGLELDEITSEKEIISREQGDSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYSRVSPTTGEVQRLIITKETAAVRP
HAVAAVLRNITFTKERYDSFIELQEKLHQNVCRKRSLVAIGTHDLDTISGPFTYTAKPPG
DISFKPLNQNKEYTASQLMSLYKTDSHLRHYLHIIEDKPVYPVIYDSNGVVLSMPPIING
DHSKISLTTKNVFIECTATDLTKAKIVLDVMVTMFSQYCSRPFTVEEAEVVYPDGKTCIY
PELAYRKEKLTSEFINRKVGISEPTEKIAQLLTRMCLLSQPTGAGDEIEVEIPPTRPDVI
HACDIMEDAAIAYGFNNITRTTPRTYTVANQFPINKLTELLRQDLAAAGFTEALNFALCS
QEDIADKLGKKISDTRAVHISNPKTAEFQVARTSLLPGLLKTVAANRKMPLPLKLFEISD
VVLKDETKDVGARNSRRFCAIYYNKSPGFEVIHGLLDRTMQLLEVKAAREQGYHIQAADD
STFFPGRCAEIFVHGKSVGRLGVLHPDVISRFELSMPCSALEMDIEPFLGHTAEALLTHD
VPMRESIKHSLPRQGDSQQPLPAPPASTKTVFGDLKSQEGLKALNDFLADKSYMEGFEAS
QADAAVFDAIPSTPTQTLQHLWRWYNHIKSFQTERVRLPATKTQFVLLNACPSSEHTSDE
DIDLFGSEDEAESAETARIKEQRLAEYAAKKSKKPALIAKSSILLDVKPWDDETDMSKLE
ECVRSVRMDGLLWGQSKLLPVGYGIKKLQIACVVEDDKVGTDVLEEAITAFEEYVQSVDV
AAFNKI
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcggggttaaaagagatattctgttcagcgcgctgggcagatcttacacc
gacgaggagttcgatgagctctgctttgaatttggactggaactggacgaaattacctct
gagaaggagataatcagcagggagcaaggtgactccaaggcctcgggagcatcagatgtc
attttatacaagatcgatgtgcctgcaaaccgctatgacctgctatgtctggaggggctt
gtccgtggactgcaggtcttcaagaacaagctggaggcgccccgctacagccgcgtgagc
cccaccaccggagaagttcagagactaatcatcaccaaggagactgcagcagtgaggccc
cacgctgtggcggctgtgctgaggaacatcaccttcaccaaggagcgctatgacagcttc
atagagctccaggagaagctgcatcagaatgtttgcaggaaaaggagcctggtggccatt
ggcacacacgacctggacaccatctctggccccttcacctatacggccaaacccccagga
gacatcagcttcaagcccctcaaccagaacaaagagtacaccgcaagtcagctcatgagc
ctctacaagacagacagccacctgaggcattatcttcacatcattgaagacaagccggtg
tatccagtcatctatgacagcaacggcgtggtcttgtcaatgcctcctattattaacgga
gaccactcaaaaatcagcttaacaacaaaaaacgtcttcatagagtgtactgccacagac
ctgacgaaggccaagattgtgttggacgtcatggtgaccatgttcagccagtactgttca
cggcctttcacggtggaggaggctgaggtggtgtatcctgatgggaagacctgcatatac
cctgagttggcttacagaaaggagaagttgacaagcgagttcatcaaccgaaaagttgga
atttctgaacctacagaaaagatcgcccagctgctcaccaggatgtgtctgctttctcag
cccaccggagccggtgatgagattgaggtagagatcccacccactcgtccggatgtcatc
catgcttgtgacatcatggaggacgccgcaatcgcctacgggttcaacaacatcacccgt
accacgccacggacctacactgtagccaaccagttcccaatcaataaactgaccgagctg
ctgagacaagacctggcagctgcagggtttacagaagctctcaactttgccctgtgctct
caggaagacatcgcagacaaacttggtaaaaagatctctgacacgagagctgttcacatc
tccaacccaaagacggcagagtttcaggtggcgcgcacctcactgctgccaggcttgctg
aaaacggtggctgcaaacaggaagatgccccttcccctcaagctttttgagatctctgat
gtggtcctaaaggatgagaccaaagatgtgggggcgagaaacagccgccgcttttgcgcc
atttactacaacaagagccctggctttgaggtgatccacgggctactggaccgaaccatg
cagctgctggaggtgaaggcagccagggaacagggataccacatccaggctgcagatgat
tccaccttcttccctggtcgctgcgctgagatctttgtccacgggaagagtgtcggccga
ctaggtgttcttcacccagatgtcatcagccgctttgaactgtccatgccctgctccgcc
ctggagatggacatcgagcctttccttggccacactgctgaagccctcctcacacacgat
gtccccatgcgggaaagcatcaagcacagcctccccaggcaaggtgactcccagcagcct
ctgcctgcccccccagcctccactaaaactgtttttggtgacttgaagtctcaagaaggc
ctcaaagcgcttaatgatttcctggcagacaaaagctacatggagggctttgaagcttcc
caggcagatgccgctgtgttcgatgccatcccctctactcccactcagactcttcagcac
ctctggcgctggtacaaccacatcaagtctttccagacagagagggtccgcctcccggct
accaaaactcagtttgtactcttaaatgcctgcccctcctcagagcacaccagcgatgaa
gacatagacctctttggttctgaagacgaggctgagagcgccgagacggccaggatcaag
gagcagcgcctcgctgagtatgcagccaaaaaatccaagaagccagccctcatcgccaag
tcttccatcctgctggatgtcaagccttgggatgatgagacggacatgtccaagctggag
gagtgcgttcgaagtgtcaggatggacggcctgctgtgggggcagtccaagctgctgcca
gtgggctacggtatcaagaagctccagatcgcctgcgtggtggaggacgataaagtgggc
acggatgtgctggaggaggccatcaccgcctttgaggaatatgttcaatctgtggacgtg
gctgctttcaacaagatctga
DBGET
integrated database retrieval system
