Oryzias latipes (Japanese medaka): 101157263
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Entry
101157263 CDS
T02443
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101157263
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101157263
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
101157263
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C2: calpain family
101157263
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
CAPN13-like_C_EFh
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
101157263
NCBI-ProteinID:
XP_011489078
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All DBs
Position
22:25137471..25158925
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AA seq
716 aa
AA seq
DB search
MPYSPPGFFCDRLIRERERRDGEGSVTKPLHFNGQDFSTLRQECLQRKGLFEDDSFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICDNPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLFRVVPQEQSFSESYAGIFHFQFWRYGDWVDVVVDDRIPTLNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKTMKKALERG
SLMGCSIDSLVPARFETRTTTGLVKGHAYSVTAVDECRPSQQKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWATLSKAEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDTLEDD
KIHKWTVSVNEGRWLRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPDDNEVACTFVVSL
MQKNRRRERKMGANLFTIGFSIYEVPKEMHGNKQHLQKDFFLLNSSKARSKSYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASVGEES
EEDHHFRTIFQEIAGEDMEITANKLKNVLNRVITERKDLNTVGFSLESCRSMIALMDVSF
MDGTGRLNLQEFRHLWNKIKQWEGIFKHYNADQSGIINSYEMRNAVNDAGFRLNNQLYHI
ITLRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccatactcaccgccgggctttttctgcgaccggctgatccgggaacgggaacggagg
gacggtgaaggctccgtcaccaagcccctccacttcaacggacaggacttcagcaccttg
cggcaggagtgcctgcagaggaagggcctgttcgaggacgactccttccctgccaccgtc
gagtctctgggcttcaaggagcttggccacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatctgtgacaacccccagttcatagttgggggggccagccggact
gacatctgccagggagatctgggtgactgctggctgttggccgccatcgcttgcctcacg
ctgaacgagaagctgcttttccgagtggttcctcaggagcagagcttttccgagagctac
gccggcatcttccacttccagttctggaggtatggcgactgggtggacgtcgtcgttgac
gaccgcatcccaaccttaaacaaccagctggttttcaccaagtcagcggagagaaatgaa
ttctggagtgccctgctggagaaggcctatgccaagcttcacggctcctatgaggccctg
aaggggggaaacaccacagaggccatggaggatttcaccgggggggtcactgagttttat
gagatgaaggaagctcccaaagagctatacaagaccatgaagaaagctctggagagaggc
tccctgatggggtgctccatcgattctctggttcctgctcgctttgagacgcgcacgacg
acggggctggtgaagggacacgcctactctgtgacggctgtggatgagtgtcggccatca
cagcaaaaggagtccaaggttcgcctggtgcgcctcaggaacccgtggggtcaggtggag
tggaacggtccctggagtgacaactccaaggagtgggccacgctctctaaggcagagaag
gagaaactgcagcaccagagcgcagaggacggggagttctggatgtcctttgaggacttc
aagaagaactacaccaagattgagatctgtaacctgactccagacacgctggaggacgat
aagatccataagtggaccgtttctgtgaacgagggccgctggttgcggggctgctccgcc
ggtggctgcaggaactacccagacactttctggaccaaccctcagtaccgcctgcgcctg
ctggaggaggacgacgacccggatgacaacgaggtggcctgcaccttcgtggtctcactg
atgcagaagaacagacggagggagcgcaagatgggagccaacctcttcaccattgggttc
tccatttatgaggtccccaaagagatgcatgggaacaagcaacacttgcagaaggacttc
ttcctcctcaactcctccaaggcacgctccaaatcctacatcaacctccgggaggtgacg
cagcgcttccggctgagccctggcgagtacgtcatcgtcccctccacctatgagccgcac
caggagggggagttcatcctgcgcgtcttctctgagaagaggaacacctcagaggaaata
gagaacaggatcgaagccgaccatccagtgccagcaccggcctcagtgggggaggagagc
gaggaggaccaccatttccggacgatttttcaggaaatagctggtgaggacatggagatc
acagccaacaaactgaaaaacgttctgaacagagtgatcactgagcgtaaggacctgaac
acggtgggcttcagcctggagagctgcaggagcatgattgctctgatggacgtatccttt
atggacgggacgggccgactcaacctgcaggagttcagacatctgtggaataagatcaag
cagtgggagggaatcttcaaacattataacgccgaccagtccggcatcatcaacagctat
gagatgaggaacgctgtgaatgatgcaggctttcgcctcaacaaccagctgtaccacatc
atcacgctgcgctacgccaacgagaacatgaacatcgacttcgacagcttcatcagctgc
ctggttcgcctggaggccatgttccgagcattccaagcctttgatcaggatggagatgga
accatcagactcagcgtgctggagtggctccagctgaccatgtacgcctag
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