KEGG   Oryzias latipes (Japanese medaka): 101157486
Entry
101157486         CDS       T02443                                 
Name
(RefSeq) probable flap endonuclease 1 homolog
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03030  DNA replication
ola03410  Base excision repair
ola03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101157486
   03410 Base excision repair
    101157486
   03450 Non-homologous end-joining
    101157486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ola03032]
    101157486
   03400 DNA repair and recombination proteins [BR:ola03400]
    101157486
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ola04147]
    101157486
DNA replication proteins [BR:ola03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    101157486
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     101157486
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     101157486
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101157486
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 XPG_I_2 DPRP
Other DBs
NCBI-GeneID: 101157486
NCBI-ProteinID: XP_004078686
LinkDB
Position
17:complement(5697438..5703770)
AA seq 343 aa
MGITKLADLIRAEAPDSISHRDISDYAGKVIALDTSVVVNQFRAATPLSSPLRGLFFRTL
TFLEHDIKPVFVFDGKPPVEKLPLLEKRAEAAGWSRPLRTGIASSQTRDCLEVLKHLGVP
VVQAPGDAEGLCASLVREGRAHAVASEDMDTLPFGANVLIRQLNAKKDSEIVEYSLPKLL
EALRISLEELVDLCILLGCDYCDKIPGLGPKRALALIQKHRTIENVLLNINRETHPVPHL
WKFKESRQIFLDPPGPPTPELVWTEPDEEALVKFLRPIMKEERVRHRMETFREKRRDLRE
EREKEKAAGHCRQTRMVDFFRITRKRNQPVEPSSSGSKKTRSK
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgggcatcaccaaactggctgatctgatccgcgcggaggctcccgactcgatctcccac
agggacataagcgactatgcaggaaaagtcattgctctggatacttctgtggtcgtgaac
cagtttcgggctgcaacacctttgtccagccctctgagaggtctcttcttccgaacgctt
accttcctggaacatgacataaagccggtctttgtgtttgacggaaagcctccggtggag
aagcttcctctgctggagaagcgtgcagaggcagccggttggagccgtccgctgcgcaca
ggcatagcctcatcccagaccagagactgtctggaggtcctgaagcatctgggcgtacct
gtcgtccaggctccaggggacgctgaggggctgtgcgccagtctagtgagggaggggagg
gcccacgctgtggcctccgaggacatggacacgctgccgttcggagccaacgtcctcatc
cgccagctgaacgccaagaaggacagtgaaatcgttgagtattccttaccaaagctgctg
gaggcactccgcatcagtctagaggagcttgtggatctctgtattttgctgggctgcgac
tactgtgacaagatacctggtttgggtccgaagagagctctggctctgatccagaagcac
cgcaccattgaaaatgtgcttctgaacatcaacagagagactcatcctgtgccgcacctt
tggaaattcaaagagtccaggcagatcttcctggatccaccaggccccccgactccggag
ctcgtctggaccgagcccgatgaagaagccctggtgaagtttctccgtcccatcatgaag
gaggagagggtccgccatcgaatggagacgtttcgagaaaagcgaagagacctacgagag
gaaagggagaaggagaaggccgctggacactgcaggcagactcgcatggtcgacttcttc
agaatcacaaggaagagaaaccagcctgtggagccctcatcctcgggaagtaaaaaaacc
aggtcaaagtga

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