Oryzias latipes (Japanese medaka): 101157543
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Entry
101157543 CDS
T02443
Name
(RefSeq) synaptic vesicle glycoprotein 2C
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101157543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101157543
Transporters [BR:
ola02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
101157543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
Pentapeptide_3
MFS_2
Pentapeptide_4
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
101157543
NCBI-ProteinID:
XP_004072481
UniProt:
H2M0C6
LinkDB
All DBs
Position
9:14037666..14065374
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AA seq
734 aa
AA seq
DB search
MEDTYNHRTSLVKGAKGVVKEAKRHAQKKVGKVVDRATDEYSSHQNYKRFQDDEDDDEDI
YRSSQAQDGQSYNENEGGSSDATEGHDDEDEIYEGEYQGIPSAGDTKQKKSQVALGQPVS
DATRDRSDLEQERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGF
VLPSAETDMCVPNSSSGWLGSIVYLGMMIGAFFWGGMSDKLGRRQCLLVCMSTNGFFAFL
SSFVQGYGLFLFCRLIAGFGIGGAVPIVFSFFAEVLSREKRGEHLSWLCMFWMIGEIYAS
AMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVGAVVALTFMPESPRFYLEVGKHD
EAWMILKQIHDTNMRARGQPEKVFSVNRIKTPRQLDELVEMNSESGNPVSKLCFRLKTEI
QGIYLNLKKCFNYPMQENMMRLAVVWFTLSFGYYGLSVWFPDVIKHLQADEYASKVMIHN
NERIESFTFNFTLENQIHKNSLFINDQFINMKLKSVTFVDSTFRNCYFDDVTSVGSYFRN
CTFIDAYFYNTDIDDSKLIDGTEVINSTFTHNKIGCQMTFDDDYSAYWVYFINFLGTLAV
LPGNIVSALLMDKIGRLSMLGGSMILSGISCFFLWFGTSESMMIFMLCLYNGLSISAWNS
LDVVTTESFPTVRRGTGFGFCNALCKLAAVLGNLIFGSLVGITKAIPILMASSVLVGGGL
VALRLPDTRANVLM
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacttacaaccacaggacttccctggttaaaggagccaaaggcgtggtcaag
gaggccaagcggcacgcccaaaaaaaagtcggcaaagtcgtggaccgtgccacagatgag
tactcatctcatcaaaactacaaacgtttccaggatgatgaagatgacgatgaggatatc
taccggagttcacaagcgcaagatgggcaaagctacaacgaaaacgagggcggttctagt
gatgctactgagggtcacgatgacgaggatgagatctatgagggtgaataccagggtatt
ccatcagcaggagacacgaagcaaaagaagagccaggtggcactggggcaaccagtgtca
gacgccacaagggatcgtagtgatctggagcaggagcgacaggcagatgaggaggagctg
gcccagcagtatgagctgatcatccaggagtgtgggcatgggaggttccagtggcagctg
ttcctggtgctcgggttggcactcatgtcagacggtgtcgaagtgtttgtggtgggattt
gtgctacccagcgctgagacagacatgtgtgtgcccaactctagctcaggatggctaggt
agcattgtttacctaggaatgatgattggagcgttcttctggggagggatgtccgacaaa
ctgggacgcaggcagtgcctccttgtttgcatgtccaccaatggcttttttgccttcctg
tcatctttcgtccagggatacggcttattcctcttctgccgcctcattgcaggttttggg
atcggaggtgctgtacccatagttttttctttctttgctgaggtgttgtcccgggaaaaa
agaggagagcacctcagctggctgtgcatgttctggatgataggggagatctatgcatcg
gcaatggcctgggccattatcccgcactatggttggagcttcagcatgggttcagcgtat
cagtttcacagctggagggtgtttgtggttgtgtgtgccttgccttgcgttggagccgtg
gtcgcccttaccttcatgccagaaagtcccagattctacctggaggttgggaaacacgat
gaagcctggatgatcctcaaacagatccatgacaccaacatgagagcgcgtgggcagccg
gagaaagtcttctctgtaaacaggatcaaaactccaagacagctggatgagctggtggaa
atgaattctgaatctggaaatccagtttccaagctttgcttcaggttaaagactgagatc
caggggatctatctaaaccttaagaaatgttttaactaccccatgcaagaaaacatgatg
cggctggccgtagtgtggttcacgctttcatttggatattacggtctgtccgtctggttt
ccggatgtcatcaaacacctgcaggccgatgaatatgcatccaaagtgatgatccacaac
aatgaacgcattgagagctttaccttcaacttcacgctggagaaccagatccataaaaac
agcctcttcattaatgaccaattcatcaatatgaagctgaagtcggtcacttttgttgac
tccacctttcgtaactgctactttgatgacgtgacgtcagtgggctcctatttccgtaac
tgtacgttcattgatgcatatttctacaacacagatattgatgattctaagttgatcgat
ggcacagaggtgatcaacagcactttcactcacaacaagataggatgtcaaatgacattt
gatgacgactacagtgcctactgggtttatttcatcaatttcctggggacactggctgtt
ctgcccggcaacatcgtgtctgcccttctcatggacaaaattggacgcctgtccatgttg
ggtggttccatgatcctttcgggcatcagctgtttcttcttgtggtttggcaccagcgag
tccatgatgattttcatgctatgcctttacaatggcctgagcatctcagcctggaactcc
ctggatgtggtcactacagagtccttccctactgtcaggaggggaacaggttttgggttc
tgcaatgcactttgcaagctggctgctgtattggggaacctgatttttggctctcttgtt
ggcatcaccaaagctatccctatcctcatggcttcgtcagtgctcgttggtggtggcctg
gttgcacttcgactgcctgacacccgggcaaatgtcctcatgtaa
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