Oryzias latipes (Japanese medaka): 101157574
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Entry
101157574 CDS
T02443
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ola04054
]
101157574
Pattern recognition receptors [BR:
ola04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101157574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
SPRY
LRR_6
NOD2_WH
LRR_4
LRR_1
LRR_8
Motif
Other DBs
NCBI-GeneID:
101157574
NCBI-ProteinID:
XP_004080628
LinkDB
All DBs
Position
19:complement(12937412..12944827)
Genome browser
AA seq
1035 aa
AA seq
DB search
MECVAEQIPEVFQEPVSSSQAAVHHFQPIFTAYGGSSILAPSIINSTVGTFTINFQQDQG
FADELNEESSQDNTANCNTEVTDNKFAEHQQKLKVVLKKKFSYLHEGPTSSASKTLLNQI
YTELYITEGGSCEVNKEHEVRQIETVSKVRATQDKVVHCNSLFEPQPGRDCPIRTVVTRG
VAGIGKTVSIHKFTVDWAEGKANANIDFVFPLSFRELNFQKKKTLSLEDLLKAFYPDIKE
GQIFANNEIKKLFILDGLDESRLSLDFRNSEIITEITQPATVAVILTNLIRGKLLSSSLV
WITSRPVASSQIPVECIDLLTEVRGFNNLQKEEYFRKKIEDRELAQKVISHVKSCRSLHI
MCHIPVFCWIAASVLEKKLPKKDSNDTPKTLTQMYIYFLSLFVENMKKRLPERRQSSAEC
VKANLLALGKLAFKELEKGHLIFYESDLKLNGIDVAQASMFSGVYTQIFNEELTLCQEKM
FCFVHLSIQEFFAALYVFLTFHNDNNNVLVKKSSSSRWFPFRESSELNLYKAAIEKALQS
ESGHFDIFLRFLLGLSMESNQVLLKHLMTTDRTHQRTRAEVQKHIKEKIKLSQSPDRCLN
LFHCLNELNDHSLVQEIQSHFVSGRLKSADLSPAQWATLVFVLLTSEEELQEFDLSRFSR
SEEALLRLLPVMRTAQVAKLNACHLTMTCCEKLPNGIRSSQLRELDLSNNNLTDEGFMHL
FVSLRDSKLQTLRLRSCDLTEESSDRLAAIISFASCELTVLDLADNDFKDTGVKKLSGGL
GSPHCKLQKLDLSFCRVTELGCTFLASALNSSGLKELDLSYNHPGESGLMLLQMLKEDPQ
CSLQKLGVDQCRVFRIQPSPKKYFMDELTLDPNTAHKDLSLSDGNRKARRWTKLPYPDHS
ERFDFQRQVLCREALTGRCYWEVGWSGPVRIGVAYKQMGRKGEGQDCSLGYNDSSWALSC
NKDKCWALHCGVKVDVTVAPNSTVGVFLDWSAGKLSFYSVSCGSLTLLHTFSTIFTEPVC
PAFHLGWADSTVQLC
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgttgctgaacagatacctgaggtgtttcaagagcccgtttcctcaagtcaa
gcagcagttcatcatttccagcccatctttactgcttatggaggcagcagtatacttgcc
ccgtccattatcaattccacagtcggcaccttcaccatcaactttcaacaagaccaaggt
tttgctgatgaactgaatgaagaatccagtcaagacaacacagccaattgtaatacagag
gtgaccgataacaagtttgcagaacaccaacagaaactgaaagtggtcttgaagaagaag
ttcagttatttgcacgaaggcccgacgagcagtgcaagcaaaacccttctcaaccaaatt
tacacagagctctacatcactgagggaggaagctgtgaggtcaataaagagcatgaagtt
cgccagatcgagacggtatccaaagtgagagccactcaggacaaagtcgtccactgcaat
agcctgttcgagccccaaccaggaagagactgccccataagaactgtggtgacgaggggg
gtggctggcattggaaaaaccgtatccatccataaatttactgtagactgggcagaaggg
aaggccaatgccaacatagattttgtatttccgctttctttccgggagctgaattttcag
aaaaagaaaacgctgagtctggaggatcttctgaaagcgttttacccggatattaaagaa
ggacaaatctttgcaaacaatgaaatcaaaaagcttttcatcctggacggtctggatgag
agccggctctctttggatttccgcaacagtgaaatcattacagagatcacgcagccagca
acagttgctgtcattctgaccaacctcatcaggggaaagcttctgtcttcgtctctggtt
tggatcacgtcccgtcccgtagcttccagccaaatccccgtggaatgcatcgacctcctg
accgaggtgcgagggttcaacaacctacagaaagaggaatacttcaggaaaaaaattgaa
gacagggagttggcacagaaggtgatcagccacgtgaaatcctgcagaagtctgcacatc
atgtgccacattccggtcttctgttggatagcagcaagcgtgctggagaaaaagttgcca
aaaaaagacagcaatgacacgccaaagactctcacacagatgtacatctatttcttgtcg
ttgtttgtggagaacatgaagaagaggctgccagaaagaagacagtcaagtgctgaatgt
gtcaaagctaacctgctggctttaggtaagctggctttcaaagagctggagaaaggtcac
ctgatcttctatgagagtgacctcaaactgaacggcatcgacgtcgcccaggcgtccatg
ttctctggagtctacacacaaatcttcaacgaggagttgactctctgtcaggagaagatg
ttctgctttgtgcatctgagcatccaagagttctttgcagcgttgtatgttttcctcacc
ttccacaacgacaacaacaacgttctggttaaaaagtcctcctcctccagatggtttcca
ttcagagaatcgtcagagctcaacctgtacaaagcagccatagaaaaggcattgcagagt
gagagtgggcatttcgacattttcctgcgcttccttttgggcctgtcgatggagtccaac
caggtgctgctaaaacatctaatgaccaccgacagaactcaccaaaggacaagagctgag
gtccaaaaacacatcaaggagaagatcaaactgagccaatcccctgacaggtgcctcaac
ctttttcactgtctgaacgagctgaacgaccactctcttgtccaggagatccagagccac
tttgtttcaggacgtctgaagtccgctgacctttcacctgctcagtgggccactctggtt
tttgttctgctgacctcagaggaggagctgcaggagtttgacctgagcagattcagcagg
tcggaggaggctctccttaggctgctgccagtcatgagaacagcccaggtggcaaagctg
aatgcatgtcatctcactatgacctgctgtgaaaaacttccaaatggcatcaggtcctcc
cagctgagagaactggacctgagcaacaataacctcacagatgaagggtttatgcatctc
tttgtgtctctgagggacagcaaactgcagacactcagattgagaagttgtgaccttaca
gaagagagcagtgacaggctggcagcaatcattagttttgcctcctgcgagctgacagtc
ctggacctcgctgacaatgactttaaagacacgggagtcaaaaagttgtccggcggatta
gggagccctcattgtaaactccagaagcttgatctgtccttctgcagggtgacagagctg
ggctgcactttcttggcatcggcgctaaattcatctgggctaaaagagctggacttgagc
tacaaccaccctggagaatcaggcctgatgctgctgcagatgctaaaagaagacccacaa
tgcagtctgcagaaactcggtgtggatcagtgccgagtattccggatccagcctagtcca
aagaaatacttcatggatgaactcactctggatcccaacacagcacacaaagacctctca
ctgtctgacggaaataggaaagcaagacgctggacaaagctgccgtacccggatcactcg
gagaggtttgatttccagagacaggtgctgtgcagggaggccctgacaggacgctgctac
tgggaggttggatggagtggtccggtcagaataggagtggcgtacaaacaaatgggcagg
aagggggagggtcaggactgctcgttgggctacaatgactcctcgtgggctctgagctgt
aacaaagacaagtgctgggctctgcactgtggagtgaaggtcgatgtgacagtcgcaccc
aacagcacagttggggttttcctggactggtctgccgggaagctctccttctacagcgtc
tcctgtggctctctgacccttcttcacaccttcagcaccatcttcacagaacccgtgtgt
cccgcgtttcatctaggctgggcggactctacagtgcagctgtgctga
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