Oryzias latipes (Japanese medaka): 101157851
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Entry
101157851 CDS
T02443
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X2
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101157851 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101157851 (rubcn)
Membrane trafficking [BR:
ola04131
]
Autophagy
Other autophagy associated proteins
Others
101157851 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
CMD
FTZ
Motif
Other DBs
NCBI-GeneID:
101157851
NCBI-ProteinID:
XP_011472281
LinkDB
All DBs
Position
4:complement(12432753..12450207)
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AA seq
957 aa
AA seq
DB search
MEVFAEGETDERKKELWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILSHEL
KNEQVYYKRRDYWPFVWCVRYISPHLASHVEQFSNLEPVLSNGMQSAGESYKAERWLLHS
LQAHMLSAQLKPLLRHLGHTRKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTV
GLSPLKSSPCLGLLKSQSLCLLPGAGGTWRNADTAPGGETLNRRLTTSNCSLREAVSTNH
QSASTTGSRSYDSDNTHTTSPDSSLGVPWVFVSRPEESGRLMTPPPGSGSIPCTFLTESP
SPSLAQPEDSCDGDSDDGPEYLAIGNLGHRSRRDSRGSSHSSEQDETKDQYLQKSSVAPA
APRRSSFSEGQRGPGKTSRGHTRSFSDTGINQKLRNESAGEGSCGKDYSPFSSQPSDSSI
NNSVCTDSHGSQHSSLQDGLFRKPSKGQSLISYLSEQDFGSCADLEKENAHFSISESLIA
AIELMKCNLLRQEEECEEEGDSDSEIQQLKQKIRLRRQQIRRSRVPFCMSSQHHFHSTDS
GGSRRSSQDSYQGLSDSGSAEEVEECELQDGCEGQSLLAVSQSGLSLSLASLFSDADIKR
TVSSSGRSFLSSESISPSYLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPEHDAPQKL
LPIPNSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPPPKRKIIVAKQNYRC
AGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPGRVLRKWDFSKYYVSNFARDLL
SKIAGDPLFNPNDINSGLYKKIKALESVRVLRVQLFHMKNLLKTCRFAKEVLDQFDSLPG
HLTEDLHLYSLNDLTAVRNGELAPRMKELLKLGTMHVAGCMLCQAKGFVCEFCGNDKDII
FPFQLSKCQRCEECRACYHRSCFQAGKDCPRCRRLAERRQRMARKNMEEQEDEGGGT
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggaggttttcgcagagggagagacggacgagcgaaagaaggaactgtggaagctgctg
tccagcctgaagaccacggttgaaggacttgtttctacaaacaacccaaacgtttggtcg
cgctatggtggcctgcagcggctgcacaaagacatgaacaacatcctcagccatgaactg
aagaatgaacaggtgtactacaagcgcagagactactggccgtttgtgtggtgtgttcgc
tacatcagcccccatcttgcctcacatgttgaacagtttagtaatctggaaccagtgctc
agtaatgggatgcagagtgcaggtgaaagctacaaggcggagcgttggctccttcacagc
ttacaggctcacatgctgtcggctcagctcaaacctctgctcaggcatctcggacacact
cgcaaatattacaatgatgatgcctttctgctgagtgagcctcatgtgactgcgatgttt
caatgtctggaagcagtggagcagaataatcccaaactgctggcccaagtcgacacagtt
ggactgtcccctctgaagagctctccgtgtctgggacttttaaagagccagagcctttgt
ctgctgccaggggccggtgggacctggaggaatgctgacacggctcctggaggagagact
ctaaaccgcagactcaccacctccaactgctctctgcgagaagcagtatccactaaccat
cagtctgcaagcactactggatctagatcctatgacagcgacaacacacacactacctct
cccgacagcagcttgggagttccctgggtgtttgtgtccagaccagaggagagcggccgg
ctcatgacaccccctcccggatcagggtccatcccttgcacattcctaacagaatccccc
tctccctccttggctcagcctgaagactcttgtgacggcgactctgatgacggcccggag
tatctggcaatcggcaacctgggccatcgcagtcgtagagattctcgaggctcgtctcac
agtagtgagcaggatgaaaccaaggatcagtatctgcagaaaagctccgtggccccggct
gcaccgaggcgttcgtctttttcagagggccagagggggccgggtaaaacctcacgaggt
cacactcgctctttttctgacacaggaatcaaccagaaactcagaaatgaatcagcaggt
gaaggctcttgtgggaaggactatagtcccttttcttctcagcccagtgattctagcatc
aacaattcagtgtgcacggactctcatggatcccagcacagcagtcttcaagatgggttg
tttaggaaaccctcaaagggacaaagcctgatcagctacctgtcagagcaggactttggc
agctgtgctgatctggaaaaggagaacgctcatttcagcatttcggagtccctcattgca
gccattgaactgatgaagtgcaacttgctgcgtcaggaggaagagtgcgaagaggaggga
gacagcgactctgagattcagcagctcaagcagaagatccgcctgcgaaggcagcagatc
cgacgcagccgcgtgccgttttgcatgagttcacagcatcatttccactccacggacagc
gggggctccaggaggagctctcaggactcctatcagggcctgtctgactctggctcggct
gaggaggtggaggagtgtgagcttcaagatggctgtgagggtcagtccctgctggcggtg
tcacagagcggcctctccctgtcactcgcctccctcttctcagatgctgacatcaagcgc
actgtcagctccagtggaagatcttttctcagctcagagtccatctctccttcatacctc
caatcgaactctgctgagtcggtggccatgggtttactcaggcagtttgagggcatgcag
cttcctgcagcctcagagctcgactggctggttccagagcacgatgctcctcagaagttg
ctgcccattcccaactctctgccgatctctcctgatgacggtgaacacgcagacatctac
aagctgaggattcgcgtccggggcaaccttgaatgggcgccgcctcgacctcagatcatc
tttaacattcatcctcccccaaaaaggaagataattgtggctaagcagaactaccgctgt
gccggctgtgggacccgcattgacccagattacatcaagcggctgcgatactgcgagtac
ctgggccgctacttctgccagtgctgccatgaaaacgctcaggccgtggttcccggtcga
gtgttgagaaagtgggatttcagcaagtactacgtcagcaactttgcccgcgaccttctg
agcaagatagctggagatccgctcttcaatcccaacgacatcaacagtggcttgtacaag
aagatcaaagctctggagtctgttcgagttcttagggtgcagctgttccacatgaaaaat
ctcctcaagacgtgtcgcttcgctaaagaggttctggaccagtttgacagcctgcctggt
cacctgacggaggaccttcacctttactcgctcaacgacctcaccgccgtgcgtaacgga
gagctggccccccgaatgaaagagctgctgaagctaggcaccatgcatgtagctggctgt
atgctgtgccaggcgaagggttttgtgtgtgagttctgtggcaacgacaaagacatcatc
tttcccttccagctgagcaagtgccagcgctgtgaagaatgccgggcgtgctaccatcga
agctgcttccaggctggaaaagattgtcctcgatgtcggcggctggcagagcgcagacag
agaatggcacggaagaacatggaggaacaggaagatgagggaggcgggacttaa
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