Oryzias latipes (Japanese medaka): 101157899
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Entry
101157899 CDS
T02443
Name
(RefSeq) collagen alpha-1(XXVIII) chain isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101157899
Peptidases and inhibitors [BR:
ola01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
101157899
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
DUF1118
Motif
Other DBs
NCBI-GeneID:
101157899
NCBI-ProteinID:
XP_004081958
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Position
21:21683098..21699747
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AA seq
1222 aa
AA seq
DB search
MLSVFASLLLIISLSSIWAQDFFEEKKTYKVRTRPLSANIHDGLAILDEDCSLELSFLLD
SSESSKDNHEQEKQFAMDMVDRLQGARLSTGRSLSSRVALLQYSSHVITEQTFRDWKGGE
NFKTQIAPIVYIGHGTYTTYAITNMTKIYQEESRPGSIKVTVLLSDGISHPRNPDIFSAV
TDAKNQGIKFFALGISREANAPANIAELRLLASSPSSRFLHNLQDKNVVEKVFTELTALA
DEGCPLAQKCACEKGERGPSGPAGKKGRPGEDGAPGQKGQKGESGLNGAPGREGSEGKPG
YKGERGERGECGTPGIKGDRGPDGPVGERGQRGLQGLQGPPGDIGPEGPQGEKGERGPPG
PSGIQGETGIGLPGPKGDMGFQGRPGPPGPPGLGEPGLSGPQGQQGVQGEKGPQGEGFPG
PKGDRGLPGPRGARGQQGVGIKGEKGELGPPGLPGLTGQAGVGIQGEKGTEGPRGPPGVR
GLQGEGLPGPKGDQGLPGEQGAPGERGSGEPGPKGEPGDSGLSGLPGLPGEDGAPGQKGE
PGLPGSRGPEGVQGVGVQGEKGDQGLRGIRGLHGPPGIPGPSGPKGERGVPGPQGMLGQP
GRSISGPKGDVGPPGPNGPIGETGLGLPGPKGDRGQPGLPGPSGPKGEGIQGPMGPPGIP
GLPGEPGPEGQGIPGPKGDVGFRGQPGLPGPPGEGLQGPPGNVGRPGPPGLSGPPGEGIQ
GPKGAPGPPGITGPRGAQGDGFPGPKGDRGLQGERGSKGTKGDVGDPGIPGDKGRPGIRG
EPGLTREEVIRLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVTRLVDRTT
VGRNATRIGLVLYSLDVYLEFNLARYTTKEEVKQAIRKMPYMGEGTYTGTAIRKATQEAF
FSARPGVNKVAIVITDGQTDKREPVKLEMAVREAHAANIEMYTIGIVNSSDPTQTEFLRE
LNLIASDPDSEHMYLIDDFNTLAALESKLVSQFCEDENGGFIYSHITNGLHNGNNDFNQI
NLQDTDEFNGHEHTGDNNVRKNLEEVHNQRPTNTRSRGDTFALPISADPLPFQVDEENEG
EDLDSQARTLSGRTLSRVNKTTLLSVAEKSSDLSVSSETLSSTSPSFKLSTSSPTLELKS
SSNSHQLQPAESQPPPEEATPPDPRCSITLDQGTCRDYVIRWYYDQQANACAQFWYGGCG
GNENRFETESECKKTCVISRRG
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgtttttgcatctttactgttgatcatttcgctgtccagcatctgggcccaa
gacttttttgaagaaaagaaaacctataaagtcaggacaaggcctctgtctgcaaatatt
catgatggtctagccatcctggatgaagattgcagcttggagctctccttcctgttggac
agttctgagagttccaaggacaaccacgagcaggaaaaacagtttgccatggacatggtg
gacaggcttcaaggtgcaaggttgtcgactggtcgcagcctgagctccagggtggctttg
ctgcagtacagtagccacgtaatcacagaacaaaccttcagagactggaaaggaggagag
aacttcaagacccagattgctcccatcgtctacattggtcatggcacctacaccacctac
gccattaccaacatgaccaagatctaccaggaggaatccagacctggcagcataaaagtg
acagtgctgctctcagatgggatttcccacccaaggaacccagacattttctcagctgtt
acagatgccaagaaccagggaatcaaattctttgctttgggcatcagccgagaggccaat
gcgccagctaacatagctgagctccgtctgcttgccagctcgccatcctcccgcttcctg
cataatctacaggacaaaaacgtagttgagaaagttttcactgaacttactgccttagct
gatgaaggatgtcctcttgctcaaaaatgcgcttgcgagaaaggagaaagaggacccagt
ggtcctgcaggaaagaaaggtcgtcctggtgaagatggagctccagggcaaaaaggccaa
aagggggaatcaggattaaatggagcgcctgggcgagaaggctctgagggaaaaccaggt
tacaaaggagaaaggggtgaaagaggcgagtgcggcacaccgggaatcaaaggcgacagg
ggtccagatggtccggttggagaaagaggacaaagaggtctgcagggcttacaaggacca
ccaggagacattggaccagagggccctcagggagagaagggtgaaaggggccctccaggc
ccttcggggattcaaggagaaaccggtattggactgcctggacctaaaggtgacatggga
ttccagggccgaccaggtcctcctggtcccccaggattaggtgaacctggcctttctgga
cctcaaggtcaacaaggtgttcagggtgaaaaaggacctcaaggggaaggatttcctgga
ccaaagggggatcgagggctcccaggcccaaggggggcaagaggacagcagggggtgggc
ataaaaggagagaagggtgaattggggcccccaggtcttcctgggctaaccggacaagca
ggagttggcatacagggagagaagggaactgaggggccgaggggaccaccgggagtaaga
ggacttcagggagagggtttgccaggacctaagggagaccaaggcttacctggagagcag
ggtgctccaggagaaagaggaagtggtgaaccaggcccaaagggagagcctggagattca
ggacttagtggtctgcctggtctaccaggagaagatggagctccggggcagaagggggag
cctgggctacctggttcaagagggcctgagggagtgcagggagttggtgttcaaggagag
aaaggtgaccagggtttaaggggtatccgtggattacatggtcctcccgggatcccagga
ccttctgggccaaaaggtgaacgtggagttccaggcccacagggcatgctcgggcagcca
ggacgatccatatctggtccaaaaggtgacgttggtccaccgggtcccaatggccctatt
ggggaaacaggcctaggactacctggtccaaaaggtgatcgtggccagccaggtttacca
ggtccatctggtccaaaaggtgaaggcatccaaggcccaatgggtcctccaggtattcct
ggattacctggtgagcccggtccagaaggacaaggaattcctggtccgaagggagacgtc
ggctttaggggacagccaggcctgcccggtccacctggagaaggtttacaaggaccacca
ggtaatgttgggagaccagggcctccaggtctatcaggacccccaggagaaggcattcaa
ggcccaaagggtgcaccaggtcctccaggcattactggccctagaggagctcaaggagat
gggtttcctggcccaaagggtgaccgtggcttacagggagaaaggggatcaaaaggtaca
aaaggagacgtgggagatcctggaattcctggtgacaagggaagaccaggaataaggggg
gaaccaggcctgacaagagaagaagtcattaggcttatcaaggaaatatgtggatgtggc
atcaagtgcaaggaaaggccaatggagcttgtgtttgtcatcgacagctcagagagcgtt
ggcccggagaattttgagatcatcaaggactttgtgacaaggttggtagacaggacaaca
gtgggacgcaacgccaccagaatcggactagtcctctatagcctagatgtctatttagag
ttcaacttggctcgctacacgaccaaagaagaagtgaagcaggcgatccgaaaaatgcct
tatatgggtgaggggacttacacaggaactgctattagaaaggcaacccaggaggctttc
ttcagtgcacgacccggcgtcaataaagttgccatcgttatcactgatggtcagaccgac
aaaagagagcctgtcaagcttgaaatggctgtgagggaggctcatgctgcaaacatcgag
atgtacactattggcattgtcaactcttctgacccaactcagactgagttcttgcgagaa
ctaaatctaattgcttctgacccagatagtgaacacatgtacctcattgatgacttcaat
actctagcagcactggagtctaaacttgttagtcagttttgtgaggatgaaaatggaggc
tttatctatagtcacatcaccaatggactccataatggaaacaatgattttaatcaaatc
aacctccaggatactgatgaatttaatggccatgaacatactggggataataatgtgagg
aaaaacctagaggaagtccacaatcagagaccaaccaacacaagaagccgaggtgacact
ttcgcccttcccatcagtgctgatccacttcctttccaggtggatgaagaaaatgaaggt
gaagatttggactcacaggctcgcacgctgagcggcaggactctgtccagagtcaacaaa
acaacactcctgtctgtggcagaaaaaagttctgatctgagcgtctccagtgaaacactt
tcatcaacttcaccatcgttcaaattgtcaacttcttcaccaacacttgagttaaaatca
tcctcaaactcccatcagcttcagcctgccgagagtcaacccccccctgaggaagccaca
cctcctgatcctcgctgcagcatcaccttggaccaaggcacctgccgggactatgttatc
cgctggtattatgaccaacaggccaatgcatgcgcccagttttggtatggaggctgtggt
gggaatgaaaaccggtttgaaacagagagtgaatgcaagaaaacctgtgtgatttcaaga
agaggttaa
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