Oryzias latipes (Japanese medaka): 101158003
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Entry
101158003 CDS
T02443
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X2
KO
K08331
autophagy-related protein 13
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04136
Autophagy - other
ola04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101158003 (atg13)
04136 Autophagy - other
101158003 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101158003 (atg13)
03029 Mitochondrial biogenesis [BR:
ola03029
]
101158003 (atg13)
Membrane trafficking [BR:
ola04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101158003 (atg13)
Atg1 complex
101158003 (atg13)
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101158003 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101158003
NCBI-ProteinID:
XP_004066665
LinkDB
All DBs
Position
2:23123359..23130882
Genome browser
AA seq
501 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VSHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLMAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSSRQFDRSAPILGIIVDHFVDPPCSSQRPAVLGQPCNYRAPDED
DGGAFAGVQDSQEVCTTSFSTSPPSQMCSSRLSYQPGALPGAAEVHPTAANAAQVLHAGK
EGGVGVVPCQPHGAETHLTGEPPLNTPGSSGDDEGLSRSAEERSVSPSDPVEYLNAFTRK
VGAFVNKPSTQITAANLDLPFAAFAARGLDSEGSDPMVQPPESPPSQSPLQASLHSQGSE
GSGPQDDFVMVDFRPAFSKDDLLPMDLGTFYREFQNPPQLTSLSLHISSQSMADDLDSLP
EKLRVYEKNIDEFDAFVDMLQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctgagtccacaggataaaaaagacctggacaagttcattaaattcttt
gctttgaagactgtccaggtgatagtccaagcccgcctaggagagaagatttgcactcgg
tcctcttcatcacccactggttctgattggtttaatctggccatcaaggacatcccagag
gtgagtcatgaagcgaagaaggctctggccggccaactcccgggcatcgggcgctccatg
tgcgtggagatctccctgaagacgtcggagggcgactcaatggaattagagacttggtgc
ctggaaatgaatgaaaagtgtgataaagacataaaggtgtcgtacacggtctacaaccgt
ctgtctgtccttctgaagtcgctcatggccataaccagggtgacgcctgcctacaaactg
tccaggaagcagggacacgactacgtcatattatacaggatctactttggggaggtccag
ctgagtggattaggagaaggtttccagacggtgcgcgtcggggtggtgggcacccccgtg
gggacggtcaccctctcctgcgcttaccgcaccaacctggccttcatgtccagcaggcag
tttgaccggtcggcccccatcctggggatcatcgtggaccactttgtggaccccccctgc
agcagccagcgccccgcagtcctgggacagccctgcaactacagagcccccgacgaggat
gacgggggtgccttcgcaggagtccaggactcccaggaggtctgcaccacctccttctcc
acctccccgccctcccagatgtgctcctccaggttatcgtaccagcctggagctctgccc
ggcgccgccgaggtccatcccaccgcggccaacgccgcccaggtgctgcatgctgggaaa
gaaggcggagtcggagtggttccctgtcagcctcacggggcggagacccacctgactggg
gagccccccctcaacacccccggcagcagtggtgatgatgagggtctgtcgcggagcgcc
gaagagcgaagcgtctccccgtctgacccggtggagtacctcaacgctttcacccggaaa
gtcggcgccttcgtgaacaaacccagcacgcagataacggccgccaacctggacctgccg
ttcgccgctttcgccgctcggggcctggactcggaggggagcgatcccatggttcagccc
ccggagtccccccccagccagtcccccctgcaggccagccttcactctcagggctcagag
ggatccgggccgcaggacgacttcgtcatggtggactttcgtccggccttctccaaggac
gacctcctgccgatggacctgggcacgttctacagagagttccagaaccccccccagctg
accagcctgtcgctccacatcagctcccagtccatggccgacgacctggactcgctcccg
gagaagctgcgcgtctacgagaagaacatcgacgagttcgacgcgtttgtggacatgctc
cagtag
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integrated database retrieval system
