Oryzias latipes (Japanese medaka): 101158004
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Entry
101158004 CDS
T02443
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101158004 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101158004 (slc6a5)
Transporters [BR:
ola02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101158004 (slc6a5)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
101158004
NCBI-ProteinID:
XP_011485700
UniProt:
H2L5J7
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Position
3:6576049..6604958
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AA seq
778 aa
AA seq
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MDCSEQREMSTPPGFIPAQQPDGAAGIQSNKPDNAAACPAPAPHHHPAPQLPPSCNESKT
FYPTEIKPGEPDSNKAYGTFKSAPPPVPGSAIVNSDFRKDSVGSARGGSALCGDPLRATT
EQNNAVGNWTAMSQTTIILGADGNMSVQPGVVAGAEDDDDEEGDENKARGNWSNKLDFIL
SMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLTMLGIAGIPIFLLEVSLGQFASQGPVSV
WKCIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCRNEWNTVECKD
KDMLLLDSCILRDRNAISVKNSTFCLSANAVGNLTKLLNVSIDANKTYVSPSEEYFKYNV
LHISKGIEYPGDIRWPLAGCLFLAWVIVYASLAKGIKSSGKVVYFTATFPYVVLIILLIR
GVTLPGAGDGILYFITPKWEKLSDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCY
RDTVIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRLPL
SPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRKHKPVFTLICCASFFILGFP
MITENGMYMLQLVDTFAASYSLVIIAIFELLGISYLYGLQRFCADIEMMIGFQPNRFWRL
CWAFVTPTILTGILGLSLYQWKVMTYEDYTYPTWSMIMGWLMVICSVIWIPIMFLIKMYL
APGTIGERLKLVCSPQPDWGPFLMKHRGDRYKNMTDPLGTSSLGLKLPPKDFHLTSYQ
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggattgctctgagcaaagagaaatgagcactcctcctggcttcatcccggcgcagcag
ccagacggagccgctggaatccaatccaacaagccggacaacgcagctgcgtgccccgca
cccgccccgcaccatcacccagcgccccagctgccgccttcctgtaacgagagcaaaact
ttttaccccacggagattaaaccgggagaaccggacagcaataaagcatatgggacgttt
aaaagcgctcccccgccggtcccgggatcagcgattgttaactcggattttaggaaggat
tcagtcggttcggcccgcggggggtccgccctgtgtggcgaccctctccgggcaaccacg
gagcagaacaacgcggtgggcaactggacggctatgagccagaccaccatcatactggga
gcagatggaaacatgtctgttcagcctggagtcgtggcgggggcggaagatgatgatgac
gaggagggagatgagaataaggccagaggaaactggtcaaataaactggactttattctg
tccatggttggctatgcggttggactggggaacgtgtggaggttcccttacctcgccttc
caaaacggtggaggagcgtttctcatcccgtacctgaccatgttgggcattgcaggaatc
ccaatcttcctgctggaagtttccttgggtcagtttgccagccaggggcccgtgtctgtt
tggaaatgcattccagccctgcaaggttgcgggattgccatgttgataatatctgtcttg
atagccatatactataatattataatgtgctggacactgtactacctgttcgcttcgttg
aagggctcactaccatgggctaactgtaggaatgagtggaacacggtggaatgtaaagac
aaagacatgctgctgttagactcatgcatcctgcgtgacaggaacgccatttcagtgaag
aactccactttctgtctgtctgcaaacgctgtgggaaacctgaccaagctgctgaatgtg
agcattgacgccaacaaaacctacgtcagccccagtgaggaatactttaagtacaatgtt
ttgcacatttccaaaggcattgaatatccaggagacatccgctggcctctggcaggctgc
ctgtttttggcctgggtcattgtctatgcttctctggccaaaggaatcaagtcatcaggc
aaggtagtttatttcacagcaacatttccttacgtggtgctgatcatcctcctgatccga
ggtgtgaccctccctggtgctggggatggcatcctttacttcatcacacctaaatgggag
aaactgagtgatgcaaaggtatggaaagatgcagcgactcagatatttttctctctgtca
gctgcatggggaggtttgatcacactctcctcctataataagttccacaataactgctac
agggacaccgttatagtgacttgcactaacagtgccactagtatttttgctgggtttgtc
atcttctccgtgattggtttcatggctcatgagctgaaggtgccaatagagaaggtggca
gacgagggtccaggcatagcatttgttgtctatccggaggctctgaccagactccccctg
tctcctttctgggcaatcatcttcttcctcatgcttctgactcttggactggataccatg
tttgccaccattgagaccatcgtaacatctgtctcagatgagttccccaagtacttgagg
aaacacaagccggtcttcacgctgatctgctgtgcctcctttttcattctgggttttcct
atgatcacagagaatgggatgtacatgctgcagctggtggacacgtttgctgcttcctat
tctctggtcattattgccatctttgagcttttgggaatttcctatctttatggtctgcag
aggttttgtgcggacattgaaatgatgattggttttcagcccaaccgattctggagactg
tgctgggcctttgtgactccaaccatcctgacgggcatcctgggactcagtctgtatcag
tggaaggtgatgacttatgaagactacacctaccccacctggtccatgattatggggtgg
ctcatggtcatctgctctgtgatctggatccccatcatgttcctcatcaagatgtacctg
gcaccaggcaccataggcgagcgcttgaagttggtctgctcccctcagcctgattggggt
cctttcctgatgaagcacagaggggatcgctacaagaacatgaccgatcccctcggtacc
agctctctgggtctcaagctgcccccaaaggacttccatcttacttcttaccagtag
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