Oryzias latipes (Japanese medaka): 101158007
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Entry
101158007 CDS
T02443
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101158007
Membrane trafficking [BR:
ola04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101158007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
Spectrin
DUF7799
CRAL_TRIO
PH_10
RPC3_helical
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
101158007
NCBI-ProteinID:
XP_011492825
UniProt:
A0A3B3HR78
LinkDB
All DBs
Position
4:1769741..1829846
Genome browser
AA seq
1187 aa
AA seq
DB search
MLCWLKEDEMSVQELLQRVQCVITHVDEIMQQDIRPLLAVDIIEQLHLQFALLSGGRGKD
GAPIIIFPEYSGFSEVPEEDFLNVVTYLTSIPSLDAASIGFIIIMDRRKDKWSSVRGCLS
RIAGAFPGHLQLVLVLRPSRFFHRTVTDIGIKMHKDDFKMKIVMLNSLSDLHGYVDKSQL
TRELGGSLDYNHSQWMHHRTAIENFAMTVKSTAQMLQRFGNELAETDLPQDVQSTKDLLA
AHTDRHNHLKDELKLALRQGSTLSGCIKEQAAKSENHELNPDETENQTTVERLMAQLDET
DNAFEQFWSKHHLKLEQCLQLRHFEKDFREVKVTLDGLMNSVNTLADTADCAARVELLLK
DLKALEDKARPSLEKAQLQALHGDQLIQSSHYAVDSIRPKCVELRRVCDDFSNEVQKKHD
VLSKSLQIHRGIDKVNQWCDSGIYLLASQAVDKCQSQEGAESALTDIENFLESAEKNQLT
ELKNLHNQFEMVLSEDLKGSVQMVLKRLEDVQEMFEKRHVSLKRLSAKQTRPIQPVAPRP
DSSPKRPSLRNPPRATGSPQSFARRAADNSHSGRQAAEVDPNKKKNTRKTKAGIKIEVMH
EESQGGSAHVVAPAESEESLSSRRRHIMTELIETERIYVEELQSILEGYYVELNNSEFSH
LIPPSLENKRDVLFGNLPEIYDFHNKTFLMELENCVEKPELVGSCFLNRKEELQVYEKYC
QNKPRSEVLWRQCGDSLFFQECQKKLDHKLSLDAYLLKPVQRITKYQLMLKEMLKCSKDE
GMVELEEALATVIDIIKSVNDSMHQIAITGFDGNLSELGKLLMQGSFNVWTDHKKVHSKV
KDLARFKPMQRHLFLYNKMLLFCKKREDATEGYEKTPSYSFKHSLKMSAVGITENVKGDS
KKFEVWYNGREEVYIIQAPSMEVKNIWVSEIRKVLTGQLEACREASQLNIYSAPIRNVRK
MALRQSDSSSPELGFRRTNPGPNTRQKKADTSAGRLAHSAGNARKHFSLQALSNRRSLPA
EPAAKEAEVPRRFSLTSSLASSSSISARRTKGSLSASIKSKRHEIKSDPTPLGYEDTLNG
AIAAARKRQSMTGSTGSGAGGTPSVPRSTSQPGCVQQRLLSMDTEDFETIPSSAEESSNS
SEEDSISKNRNSSQYRVQLTYTSCEARDLSLGGSDLVPFREETENGN
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttggctgaaggaggacgagatgtcggttcaggagctgctgcagcgggtgcag
tgtgttatcacacacgtcgatgagatcatgcagcaggacatcaggcccctgctagcagtg
gatatcatagagcagcttcatctgcagtttgccttgctgtcaggtggacgggggaaggat
ggagcgcccatcatcatttttcctgagtactctggcttcagtgaagtgccagaggaggat
tttctcaatgttgtaacttacttgaccagcatccccagcctggatgctgccagtattggc
ttcatcatcatcatggaccggcggaaggacaaatggagctcggtcaggggatgtttgtcc
aggattgctggggctttcccaggacatcttcagctggtgttggtgctcaggccgtccagg
tttttccacagaactgtcacagatattgggataaagatgcacaaggatgacttcaaaatg
aagatagtgatgctgaactcactgtcagaccttcatggttatgtggacaaaagccaactg
acccgggaacttgggggaagcctggattacaaccacagtcagtggatgcatcatcgaact
gccatagaaaactttgccatgacggtgaaatccactgcccagatgctgcaacggtttgga
aatgagctggctgagacggatctcccccaagatgtccagagcaccaaagacctgctggct
gcacacactgacagacacaaccacctcaaagacgaactgaagctggctctgcggcagggc
tccaccctgtctggatgtataaaggagcaagcggccaagtcagagaaccatgaactcaac
cctgatgagacggagaaccaaaccaccgtggaaaggctgatggcccagttggatgagacg
gacaacgcctttgagcagttctggagtaaacatcacctcaagctggagcagtgcctgcag
ctgcgccactttgagaaggacttcagagaggtcaaagtgactctggatggtttgatgaat
tctgtaaacacactggcagacacagcggactgtgcagccagagttgagcttcttttaaag
gacctgaaagcactggaggacaaagcacggccctcgctggagaaggcacagctgcaggcg
ctgcatggcgaccagctcatccagagtagccactacgccgtggactccattcgccccaaa
tgtgtggagttgcggcgggtctgcgatgacttcagcaacgaagtccagaaaaagcatgat
gtcttgtccaaatccttgcagatacatagaggcatcgacaaggtcaaccagtggtgtgac
tctggcatctatcttctggcctctcaagctgtggacaagtgtcaatcacaggaaggggca
gagtcagcactgacagacattgaaaactttttggaatcagcagagaagaaccagctaaca
gaactgaagaacctccacaaccagtttgagatggttctgtctgaggacctgaagggcagc
gtccagatggtgctgaagcgactggaggatgttcaggagatgtttgagaagcggcatgtt
agccttaaaagactgtcggccaaacagacgaggcccattcagcccgttgctccaaggcct
gattcctcacccaaacgtccttcactcagaaaccccccgagagctacagggagtccgcaa
tcttttgctcgcagagcagctgataactcacacagtggtagacaggcagcagaagttgat
cccaacaagaagaaaaacactcgcaagaccaaggcaggcatcaagatcgaggtgatgcac
gaggaaagccagggaggctccgcacatgttgttgctcccgctgaatctgaggagagtctg
tccagcagacgcagacacatcatgacggagttaattgaaaccgagaggatttacgtggag
gaactgcagagcatcttggagggctactatgttgagctgaataactctgagtttagccac
cttatccccccatccctagagaacaaaagagacgtgctgtttgggaacctgccagagatc
tacgactttcacaacaagacgtttctcatggagctggaaaactgcgttgagaaaccagag
ttggtgggaagctgttttctgaacaggaaggaagagcttcaggtgtatgagaagtactgc
cagaataagcctcgctctgaagtcttgtggagacagtgtggggacagcctcttttttcag
gaatgccagaagaaactggaccacaaactgtctctggatgcttacctgttgaagcccgtt
cagaggatcactaaatatcagctgatgctaaaggagatgctcaaatgcagtaaggatgag
ggaatggtggagctggaggaggctttggccaccgtcatcgatattatcaagtctgtcaat
gactccatgcaccagatagcaattactggttttgatggaaacctgagtgagctggggaag
ctgctgatgcagggctccttcaacgtgtggaccgaccacaagaaagtccacagcaaggtg
aaggacttggccaggttcaagcccatgcagaggcacctcttcctatacaacaagatgctc
ctgttctgtaagaagcgagaggatgccacagagggctacgagaagacgccgtcctacagc
ttcaaacactcgctgaagatgagcgccgtcgggataacggagaacgtgaagggggacagc
aagaagtttgaggtgtggtacaatggaagagaggaggtttacattattcaggctccctcc
atggaggtaaaaaacatttgggtgtcggagatccgaaaagttctgacaggccagctggag
gcatgcagagaagccagtcagctcaacatctacagtgctcccatcaggaatgtccgcaaa
atggctctcagacaatcggattcatcgagtccagagttgggctttaggaggacaaaccct
ggtcctaacacaagacagaagaaagccgacacttcggccggccgcttggcccactcggct
ggtaatgccaggaagcacttctccttgcaagcactttcaaaccgaaggtctcttccagca
gagcctgctgctaaggaagcagaggttccacgccgcttctccctcacgtcctctctggcc
tcctcctcttccatcagcgctcgcagaacaaaaggttccctttctgctagcataaaaagc
aagagacatgaaataaagagtgatccgactccacttggttatgaagatactttgaatggt
gctatcgcagcagcgaggaaacgccagagtatgactggcagcactggttctggtgccggt
ggcactccatctgtgcctagatctacctcccaaccaggctgtgtgcagcagcgtcttctt
tccatggacacggaggactttgagacaattccctctagcgcagaggagtcctccaactct
tcagaagaggacagcatcagtaaaaatcgtaacagcagccagtaccgggtgcagctgacc
tatacatcctgtgaagcaagagacctttcattgggaggcagtgacctggttccatttcga
gaagaaactgagaatggaaactga
DBGET
integrated database retrieval system
