Oryzias latipes (Japanese medaka): 101158014
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Entry
101158014 CDS
T02443
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04260
Cardiac muscle contraction
ola04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101158014
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101158014
04261 Adrenergic signaling in cardiomyocytes
101158014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101158014
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101158014
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
WAK_assoc
dCache_2
VWA_CoxE
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
101158014
NCBI-ProteinID:
XP_023810556
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Position
5:5280540..5321054
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AA seq
1157 aa
AA seq
DB search
MRGDRSSISILLLSVGFLNLANVAGSQQGIPLSVVKLWASAFGGEIKSISAKFSGSQLLQ
KELWSITAPRPGTNSSSESSPSIKGNTRINSRILAACPGLWEEGASVRGGPRKYGESVQT
AFRKRLKAQSPGLSCPEKRKELVKSVKVEEIDGVKLVKNLAVKMEEMFRKKAEATRRLVE
AAEEAHRQHEENPDLQYEYFNAVLINEVDEEGNNVELGGEFILEPNDHFNNLSVNLSHSV
VQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFETDPTLIWQYFGSAKGFFRQYPGVKWHP
DEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDF
FNIIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLDKLFAKGIGLLGEALSEAFTILND
FNQTGRGSVCSQAIMLVTDGATEMYDDVFEKFNWPERKVRIFPYLIGRESAFADNLKWMA
CANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQAHKLKVKS
GPSLTTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYVFAITNNG
YILIHPDLRPLYQGSQKRRKPHYSSVDLSEVEWEDKDDILRNAMVNRRTGTFSMETKKTV
DRGRRVLKMHYDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSVDAGLRDLEQPDVALAD
EWTYCNTEEEHEHRHLTQIQAIKLFMTGRRLNLKCDRELIQEVLFDAVVTAPLEAYWTGL
ALNKSENSDKGVEITFLGTRSGLSRINLFIPSDQLSNQDFLTAEDKEGVFNADHFPLWYK
RAAEQVPGTFVYSIPFSTALENKSVVLASTAIQLQDDRKSPIFAAVGIQMKLEYFQRKFW
TACRQCTALDGKCSISCDNDDVNCYLIDNNGFILVTEEQSQTGLFFGEVEGAVMNKLLQM
GSFKRITLYDYQALCRDYSGSSDSARTLSDPFSVVRWLLTELVIFLLEFNLYSWWNVDLT
VKAQRSRGKTMMVPCDTEYPAFVSERTIKETTGNIQCDNCVRSFVIQQIPSSNLFMVVVD
NKCDCSSIPPVTMDPIEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENAMECGSASRLS
SPLTAGLLPLVAATISR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggacaggagcagcatcagcatccttctgctctccgtcggattcttgaatctg
gccaacgtggcggggtcccagcaagggattcctctctcagttgtgaagctttgggcctct
gcatttggtggggaaattaaatccatctctgcaaaattttctggatcccagctcctgcaa
aaggagctgtggtccatcacagcaccccgtccggggaccaactccagctctgagagcagc
ccgtccatcaaaggcaacaccaggattaattccagaattttggctgcttgtcctggattg
tgggaggaaggtgcatctgtcagaggaggtcctcgcaaatatggagaaagtgttcaaact
gcattcagaaagaggctcaaggcgcagagtccaggtctatcctgccctgagaaacgtaaa
gaacttgtaaagtcagtcaaagtggaggagatcgatggtgtgaaactggtgaaaaatctg
gccgtgaagatggaggaaatgttccggaaaaaggcggaggccacgaggcggctggtggag
gcagcagaagaagctcaccgacaacacgaggaaaatcccgacctgcagtacgagtacttc
aacgccgtgctgatcaacgaagtggatgaggaaggcaacaacgtggagctggggggagag
ttcattctggagcccaatgatcacttcaacaacctgtcagttaacctgagccacagtgtg
gtgcaggtgcccaccaacatgtacaacaaagatccagacatagtgaatggggtttactgg
tccgaggccttgaacaaagtgtttgtggataattttgaaacagatccgactcttatttgg
cagtactttgggagtgccaaaggcttcttcaggcagtatccaggagtaaaatggcatcca
gatgagcatggtgtcatcggctttgactgcaggaatcgaaaatggtacatccaggcagct
acatctcccaaggatgtggtgatcctggtggatgtcagtggaagcatgaaaggactgagg
ttgaccatcgccaggcagactgtttcctccatactggacactctgggagacgatgacttc
tttaatataatagcatacaatcaggagatccactatgtggagccttgtttgaatggaact
ctggttcgggctgacagaaccaacaaagaccacttccgggaacatctggacaagctgttt
gccaaagggatcgggctgctgggtgaagctctgtctgaagccttcacaatcctcaatgac
ttcaatcagaccggacgcggcagtgtctgcagccaggccatcatgctggtgactgacggc
gcaactgaaatgtacgatgacgtttttgagaagttcaactggccagaaagaaaagtgcgc
atattcccctacctgattggacgagagtctgcatttgctgataaccttaaatggatggct
tgtgcaaacaaaggatattttagtcagatttccaccctggctgacgttcaggaaaatgtg
atgcggtatcttcatgtcatgagtcgaccgaaagtcatcgatcacgagcacgacactgtg
tggaccgaagcttatgtggacagtgctctttctcaggctcataagctgaaagtcaaatcc
ggtccatctctgacaacaactgtggccatgccagtcttcagtacaaagaacgaaacgaag
aaccagggtattctgctgggggttgtaggaacagacattcctctgcaggagctgatgaag
ctcatcccaaaacatatgttggggatccatggttatgtgtttgccatcacaaataatggc
tatatcctgatccaccccgacctccgccctttgtaccaggggagtcagaaaaggaggaag
ccccactacagcagcgtggatctgtcagaggtggagtgggaagacaaagatgacattctg
cggaacgccatggtgaacaggaggacagggaccttctcaatggagaccaagaagactgtg
gacagagggaggcgagtgctcaagatgcactacgactattactacactgacatcaaagga
actccattcagtgttggtgtagctctctcaagaggtcatgggaagtattttttcagagga
aatgtatccgttgatgcagggcttcgtgatctggagcagccagatgttgcccttgcagat
gaatggacgtactgcaacacagaagaggagcatgagcaccgccacctgacccagattcaa
gccatcaaactcttcatgacaggccgccgactcaacctcaagtgtgacagagagctgatc
caggaggttttatttgatgccgtggtcactgctcctctggaggcgtactggaccggactg
gcgctcaacaagtcagagaactcagacaaaggagtggagattactttcctgggaacccgc
agtggtctgtcgagaatcaacctgtttatacccagcgatcagctctccaatcaagatttc
ctgacagcagaggacaaggagggagtgtttaatgctgatcacttccctctctggtacaag
cgagcggcggagcaggtcccgggcacatttgtctactccattcctttcagcacagcttta
gaaaacaagagcgtggttttggccagcactgcaattcagctccaagacgatagaaaatcc
ccaatatttgctgctgtggggatccagatgaagctggagtactttcagaggaagttctgg
actgcctgcagacagtgtacagccctggatggaaagtgcagtatcagctgtgataatgat
gacgtcaattgttacctaattgacaacaacggcttcattcttgttactgaagaacaatct
cagacagggctgttctttggagaggtggagggggccgtcatgaacaagcttcttcaaatg
ggatccttcaaacggatcactctgtacgactaccaggccctttgcagagactattctggc
agcagcgacagtgcacgcaccttatcggatcctttttccgtggtaaggtggcttctgaca
gaactagttattttcttgctggagttcaacttgtacagttggtggaacgttgatctcacc
gtaaaagctcaaagatctcggggtaaaaccatgatggtaccgtgtgacacagagtaccct
gctttcgtctctgaacgcaccatcaaagaaacgacgggcaacattcagtgcgacaactgt
gtcagatcatttgtcatacagcagattcccagcagtaacctctttatggttgttgtggac
aacaagtgtgactgcagcagcattcctcctgtgaccatggaccctatcgagatcatgtac
aatgagtcactaaaatgtgacagactgaagttccagaaagacagaaaaaagcctgaatcc
tgtcaccctttccatcctgaggagaatgccatggagtgcggttcagcctcgcgtctctcc
agcccgctgacggcaggcctgctgcctctggtcgcagcgaccatcagcaggtga
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