Oryzias latipes (Japanese medaka): 101158129
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Entry
101158129 CDS
T02443
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1 isoform X1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ola01006
]
101158129
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101158129
Prenyltransferases [BR:
ola01006
]
Protein prenylation
Rab geranylgeranyltransferase
101158129
Membrane trafficking [BR:
ola04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101158129
Endosome - Lysosome transport
Rab GTPases and associated proteins
101158129
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Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
DUF6301
Motif
Other DBs
NCBI-GeneID:
101158129
NCBI-ProteinID:
XP_011482131
UniProt:
H2MCD7
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Position
14:complement(23291276..23302564)
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AA seq
617 aa
AA seq
DB search
MAAEDLPSEFDVVILGTGLAESVVAAACSRVGQRVLHLDRRSYYAANWASFTFNALLTWI
QEQQEGPQPEQGKDWSSLLNDGEELIHLSNPDLDSITNIQVLSYASEEDEEVPDTAKEET
SANSQLEAESTGSREEESAEAEEESAEAEATNTKGEEPEVDQSHPGASSGPSEPTRKKIS
YAQLLKEGRRFNIDLVSKLLFSRGSLVDLLIRSNVSRYTEFKNVTRILTYRHGNLQQVPC
SRADVFASRQLSVVEKRKLMRFLTSCIEETEMDQAYSSQPYSKYLQDQQLGENLQHFLLH
SIAMVTEDTPTEAGLASTRHFLRSLGRYGNSPFLFPVYGLGEIPQCFCRMSAVFGGIYCL
RHSVSCLIVDKDANRCKAVIDSRGQRISCSHFVVEDGYLGSRSSVTTPTRLLSRAILITD
SSVLPSDSEQQVSMVTIPPGEVCQSAVKMVELCSSTMTCMPGTYLVHLTCQSVGSAFEDL
SQLVTKMFQTPESQEPGGRPSVLWSLYFNMADGSVPGVEGQGLPSNVHVCSGPEGSLDHE
HSIKQAELIFQRILPDEEFCPPAPNPEDIIYDGESPTPSAEEDSVKEAGQQEESGGDLKE
AGQQEESGGDLNPQLDQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggaggacctgccctcggagtttgacgttgtaatcttgggcacaggtttggct
gagtctgtggtggcagctgcctgctccagagtgggtcagagggtccttcacctggacagg
aggagttattatgcagctaactgggccagcttcaccttcaacgctctgctcacctggatc
caggagcagcaggaggggcctcagccagagcaaggcaaggattggtcaagcttgttaaat
gacggggaggagctaattcacctatcaaatccagaccttgattccatcactaacatacaa
gtgctctcttacgccagtgaggaagatgaagaagttccagacactgccaaagaagaaaca
tctgccaacagccaattagaggcggagtctacaggttcaagggaggaggagtcggctgag
gcagaggaggagtcggctgaggcagaggccaccaacacaaagggggaggagcctgaagtg
gaccagtcgcatcccggtgcatcttccggcccatcagaaccaaccaggaagaagattagc
tacgcccagttacttaaggaaggtcgcaggttcaacatcgacctggtctccaagctgctg
ttctctcgtggctcgctggtcgacttgctcatcaggtccaacgtcagtcgctacacagag
ttcaagaatgtcaccaggattctcacatatcgccatggcaacctgcagcaggtaccctgc
agtagagcggatgtctttgccagtcgtcagctgtctgtggttgaaaagaggaagctgatg
cggtttctaacttcctgtatagaggagacagagatggatcaagcatacagcagtcagcca
tattcaaagtatctgcaagaccagcagctcggggaaaacctgcagcatttcttacttcat
tctattgccatggtaacggaagacacacccacggaggcgggtctagcctctacacgtcac
tttctgcgctccctgggtcgttacggcaacagtccatttttgttcccagtgtacggcctc
ggagaaatccctcagtgtttttgcaggatgagtgcagtttttggaggaatctactgcctc
aggcactcggtcagctgcctcatcgtggacaaggacgccaacaggtgtaaagcagtgatt
gacagtcggggacagcgaatcagctgcagccactttgtggtggaggatggttatttaggc
agcaggagtagtgtgaccacgcccaccaggctgctgagcagagccatcctcataacggac
tcctcggttctgcctagcgactcagagcagcaggtttccatggtgactattcctcctggg
gaggtgtgccagtcagcagtgaagatggtggagctgtgctcgtccacaatgacctgcatg
ccaggaacatatttggtccacctgacctgtcagtcggttggctccgccttcgaggacctg
tcccagctggtcactaagatgttccaaaccccagagtcacaggagccaggagggcgtccg
tctgtcctctggagtctgtacttcaacatggctgacggctcggtgcctggggtcgaaggt
cagggactcccatcgaacgtgcacgtgtgttctggtccagaaggaagtctggatcatgaa
cacagcatcaaacaggctgagctcatcttccagaggattctgcccgacgaggagttctgt
cctccagctccgaacccggaggatatcatctatgacggagagagccccaccccttcagcc
gaggaggactcggtcaaggaggcggggcaacaggaggaatcaggaggggatctcaaggag
gcggggcaacaggaggaatcgggaggggatctgaaccctcagctggatcagtga
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