Oryzias latipes (Japanese medaka): 101158286
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Entry
101158286 CDS
T02443
Symbol
ctnna1
Name
(RefSeq) catenin alpha-1
KO
K05691
catenin alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04520
Adherens junction
ola05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101158286 (ctnna1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101158286 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101158286 (ctnna1)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101158286 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
HTH_psq
GIT1_C
Spectrin_Dys-1
Motif
Other DBs
NCBI-GeneID:
101158286
NCBI-ProteinID:
XP_004073442
UniProt:
H2LSG1
A0A3P9KCF2
LinkDB
All DBs
Position
10:19901528..19956088
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AA seq
904 aa
AA seq
DB search
MSTFATPNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHV
LAASVETATQNFLEKGEKIAKESQFLKDELTAAVEDVRKQGESMRQASGEFAEDPCSSVK
RGNMVRAARALLSAVTHLLVLADMSDVYKLLVQLKLVEDGLVKVRNAATEQDLENQNSAL
KPEVNKLNSMAAKRQQELKDVHHKDQMAAARGVLQRNIPLLYTATRACLQHPDVAAYKAN
RDLIYKQLQQAVSGISNAAQATTAEDSALGHPAGGGELAYALNNFDKQIIVDPLAFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNTGRKDR
SDTLNTAIDRMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHAHKLIEVANLACSISNNEEGVKLVRMAASQLETLCPQVINAALALAAKPNSKVG
LDNMDLFKEQWEKQVRVLTDAVDDITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVVHVVTSEMDNYEPGVYTEKVLEATKLLTNTVMPRFTLQVEAAVEALSS
GDPSVDENELIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETDDFEVQSRTSVQTADD
QLIGGQTARAIMAQLPQEDKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCM
IMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSTMDKLGRTIADNCPDSSCKQDLLAYLQ
RIALYCHQLNICSKVKAEVQNLGGELVVSGLDSAMSLIQAAKNLMNAVVSTVKASYVAST
KYQKSKGMEALNMPAVSWKMKAPEKKPLVKREKDDGQARVKRSSQKKQVNVVQALSEFKA
MDSI
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactttcgccacgcctaacatcaactttaaatgggacccaaagagcctggagata
cgcactctagcagtggagaggctgctggagccccttgttacccaggttaccacactggta
aattccagtaataaaggtccatctaacaagaagaaggggcgctctaaaaaggctcatgtt
ttggctgcttcagtggagactgcaactcagaacttccttgagaaaggagagaagattgca
aaggaaagccagttcctcaaggatgagctgacggctgcagtggaggatgtccgtaagcaa
ggagagtcaatgaggcaagcttcaggagaatttgcagaagacccctgctcctctgtaaag
aggggtaatatggttcgtgctgccagggccctgctctcagctgtcacgcatctgctggtg
ctggcagacatgtctgatgtgtacaaactcctcgttcagcttaaactggtggaggatggt
ctggttaaagtgcgtaatgcagctacagagcaggacttggaaaaccaaaacagcgctctg
aaaccagaggtgaacaagctgaactcgatggctgccaagagacaacaggagctaaaggac
gtccatcacaaggaccaaatggctgctgcgcgtggagtgctacaaaggaacatccccttg
ctgtacacagcaacccgtgcctgcctgcagcatcctgacgtggcagcctacaaggctaac
cgtgacctgatctacaagcagctgcagcaagcagtgtccggaatctccaatgctgcccag
gccacgaccgctgaagactcggcactcggtcatccagcagggggcggagagctggcttac
gccctcaacaattttgataaacaaatcattgttgaccctctggcgttcagcgaggagcgc
tttcgtccttctctggaggagcgccttgaaagcattattagtggagctgccctcatggct
gattcctcttgcacacgtgatgaccgcagggagcgcattgtggcggaatgcaactctgtg
cgtcaagcactacaggaccttctgagcgagtacatgggaaatactgggagaaaagacaga
agcgacactctgaacacagccatcgacagaatgacaaagaagactagagatcttcgtaga
cagcttcgcaaagctgtgatggaccacgtctctgattctttcctggagaccaacgttcct
ctcttggtcctgattgaagctgcaaagaatggcaatgaaaaagaagtgaaggagtacgca
caggtgtttcgtgaacacgcccacaagctgattgaggtggccaacctggcatgctccatt
tccaacaacgaagagggggtgaagcttgtccgcatggcagcgtctcagctcgaaactcta
tgcccccaggtgatcaatgcagcactggccctcgctgccaaacccaatagtaaggtgggc
ctggacaacatggatttgttcaaggaacagtgggagaaacaagtccgtgtcctcactgat
gctgttgatgacataacatccattgatgacttcctgtgtgtgtctgagaaccacatcttg
gaggatgtgaataagtgtgtcattgctctgcaagagaaggacgttgatggcttggatcgc
actgctggggccattcgaggacgtgctgccagggttgttcatgtggtcacttccgaaatg
gacaattacgaacctggagtctacacagagaaggttttggaggccaccaagctccttact
aacacagtcatgccacgattcacactgcaggtagaagctgcagtcgaggccttatccagt
ggcgacccctcagtggatgagaatgaactaatcgatgcatcccgtctggtgtacgacggc
atccgcgacatccgcaaagcagtcctcatgatcagaactccagaagaactggacgactcc
gattttgagacggacgactttgaagtacaaagcaggaccagcgttcagacagcagatgac
cagcttattggtggccaaactgcgcgtgctatcatggcccagctgcctcaggaggataag
gcaaagattgcagaacaagtggctagcttccaagaagaaaagagcaagctggatgccgag
gtatccaagtgggatgacagtggcaacgacatcattgtgttggccaagcagatgtgcatg
atcatgatggagatgacagactttaccaggggaaaagggccactgaaaaacacatctgat
gtcatcagtgctgccaagaaaatcgcagaggcaggatcaacaatggacaagctgggtcgc
accattgctgacaactgtcctgactcttcctgcaagcaggacctgctggcctacctgcag
cgcatcgctttgtactgccaccagctcaacatctgcagcaaagtcaaagccgaggtccag
aacctgggaggggagctggtcgtttcagggttggacagcgccatgtccctcattcaggct
gcaaagaacctgatgaatgcggtggtgtccaccgtcaaggcttcttacgtcgcttccacc
aagtaccagaagagcaaaggcatggaggccctcaacatgcccgccgtttcctggaagatg
aaagctcctgagaagaaacctctggtgaagagggagaaggatgacggccaggccagagtc
aagagatcctctcaaaagaagcaggtcaacgtggtgcaggctctgagcgagttcaaagcc
atggatagcatctag
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