Oryzias latipes (Japanese medaka): 101158434
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Entry
101158434 CDS
T02443
Symbol
hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101158434 (hdgfl2)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101158434 (hdgfl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
101158434
NCBI-ProteinID:
XP_011472831
LinkDB
All DBs
Position
4:complement(30507143..30519487)
Genome browser
AA seq
649 aa
AA seq
DB search
MPHSFMPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAAKDLFP
YEKYRERYGKPNKRKGFNEGLWEIQNNPHASYSAPPVPPSSSDSEGSNPGERTDEDGEEE
EEEEDNAKVPQRAASASEEDSDSGSEDGGRGGVKRKPQAPKRPPPPKKARGSSSDRGEES
GSPSESDPTPSESDSGKNSDQDFTPEKKSGGRAGKKVGGRGKKKKTSSNSDSDSGSGSEK
KAMDSDSEDEKPRPALSGSESQSGSKSDSDSDPPPRKGPQPRKKEKPAPKPRARKPKPAP
AKQTASSSSDSDSDSEPDRISEWKKRDEERRRELEERRKREEAEELRRLREREKEEDEKK
KKDKDRGKKESDSDGSSSSDEGIDDHPLKKSKKPPPPPIPAPSDSDSPVEKAKKPPKKME
NQKKAKVKKEKDRKERKEKELKEKKARRLEEKSRSRSKAENSKRRPERQREKKAEKKKEQ
SPEEKLQKLHTDIKFALKVDNPDIERCLQALEELEAVPVTSHILQKNAEVIATLKKIRRY
KASTAVMEKATEVYNKLKLRFVGKSEVPVKTKMEAKDDTADDEEAQNTVNGESKEKKNDA
EVEEKPEPPAEEDNQDASSSPNRHSPDSPAEQQTGPYEEAAAEQPAVES
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcttcatgcctggagacctggtctttgctaaaatgaagggatacccccac
tggccagctaggattgaggatgttgctgatggagcagtgaagcccccgcccaataaaatc
ccaattttcttttttgggacgcatgaaaccgcattccttgcagcaaaagatctttttcct
tatgaaaagtacagagaacgctatggaaagcccaacaaaaggaagggattcaatgagggt
ttatgggagatccagaacaatcctcacgcctcttacagcgctccgcctgtgccgccaagc
tcgtctgacagtgaaggcagcaaccccggagaacgaacggacgaggatggtgaggaggaa
gaggaggaggaggacaacgccaaggtgcctcagagagccgcctctgcttctgaagaagat
tccgattctggtagtgaagacggaggaagaggaggagtgaagcggaaaccgcaggctcca
aagcggcctcctcctccaaaaaaggctcgcggctcctccagtgaccgaggtgaagagagc
ggatctccttccgaatccgatcctactccttcagagtccgactctgggaaaaacagcgac
caggacttcactccagagaagaaatctggaggacgagctggaaagaaagttggaggcagg
gggaagaaaaagaaaacctcatcaaactcagattcagactcgggatccggatcggaaaag
aaggcgatggacagcgactcggaggatgagaagccccggccggctttgtctggctcagaa
tcccagtctggatcaaagtctgactcggattctgacccacctcctcggaagggcccccag
ccccgcaagaaagaaaaaccggcaccaaagcctcgtgcgcggaagcccaaacccgccccg
gccaaacaaacggcttcatcgtcctccgacagcgacagcgacagtgaacccgaccgcatc
agcgaatggaagaaacgcgacgaggagcgcagacgagagctggaggagcggcgaaaacga
gaggaggctgaggagctccgtcggttacgcgagagggagaaggaggaagacgagaaaaag
aaaaaggacaaggacaggggcaaaaaagagagcgacagcgatggcagcagcagctcagat
gaagggatagatgatcacccactgaagaagtccaagaaacctcctcctcctccgatccct
gctccttcagactccgattctcccgtggagaaagcaaagaagcctcccaagaagatggaa
aaccagaagaaggcaaaagtaaagaaagagaaagacaggaaagaaagaaaggagaaggag
ctgaaagagaagaaagccaggcggttagaggagaagtccagatcaaggtcaaaagcggaa
aattccaaacgcagaccagagcggcagcgcgagaagaaagcagagaagaagaaggagcaa
tccccagaggaaaagttacagaaactccacacagacatcaagtttgcactgaaagtggat
aaccctgatattgaacgatgtctacaagccctggaggagctggaagccgtccctgtgacc
agccacatccttcagaaaaacgctgaggtcatcgccacgctaaaaaagattcggcgctat
aaagccagtacagcagtcatggagaaagccactgaagtttataataagttaaagctacgt
tttgtgggtaaatcggaggttcctgttaaaactaagatggaggcgaaggatgacactgct
gacgatgaggaagcacaaaatactgttaatggagaatcaaaagagaagaaaaatgatgca
gaggtggaggagaaacccgaaccccctgcagaggaggacaaccaggacgcatcttccagt
ccgaacaggcacagcccggacagcccagctgagcaacagacaggcccctatgaagaggct
gccgcagagcagcctgctgtagaaagctaa
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