Oryzias latipes (Japanese medaka): 101158559
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Entry
101158559 CDS
T02443
Name
(RefSeq) zinc finger BED domain-containing protein 4 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101158559
04121 Ubiquitin system [BR:
ola04121
]
101158559
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
101158559
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
101158559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
zf-C2H2_12
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
101158559
NCBI-ProteinID:
XP_023821997
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All DBs
Position
18:698511..702769
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AA seq
629 aa
AA seq
DB search
MEPGSPRGLTHLSKCGILRDFIAEELNLAARDIIEEMERTMADYEVKTSELKQEIEEQRR
QLEYLQPEGSSENTRKRPRSQMWEHFELIGPNRLQCLLCPQQLSYNNNTSSMMRHFKAKH
DGILETDYDKKHDLDQALVNLVVKDSQPCSIVEDRGFRDFVKKLDPSYALPSKQALKKMV
DDRYQEEKADAQAQLREAEAVSLTVDLWTSADTRLAVACHYVLENSKLATVLLGVLPFPQ
NHGPTDVADAQRTLMAEWGLEGKVKCLVSDTTPAMVAAADDLALPHVECIAHALNGVVRR
ALDKTAGLKGLRRRAGEVVALFRSSAAAKEKLRSKQQKLALPVTKLVREESSRWTSTFLM
LQSLLDARRAVGSALTALGAKVEPLSCDESETSAACLQVLKPFYTATVEMSEQKRVLGSM
GIPLVKMLLLATEEVAEESDNVTAELLGQNLSAGLRREFDGLEENPVLSLATLLDPRFKT
IGFRCQEKAQQAVQTLTAECAALVRPAADRPTERPAQQTSTAFNLWKSLDDQASMVRTHS
NATADATLEVQRYMTDPPLERSQDPLVYWKEHKNIYPHLFSLAKKHLCIPASSVPFERVF
SKAGDVFSRKRNRLSPKAAEKILLLNKNI
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggctctccccggggactcacgcacctcagcaaatgcgggattctgcgggat
ttcatcgcggaggagctgaacctggccgcgcgagacatcatcgaggagatggagaggacc
atggcggactacgaggtgaagacgtccgagctgaagcaggagatcgaggagcagaggagg
cagctggagtacctgcagcccgagggctcctcggagaacaccaggaagaggccccgttct
cagatgtgggagcactttgagctgattggtccaaacaggctgcagtgtctgctgtgtccc
cagcagttgtcctacaacaacaacacgtcgtccatgatgaggcacttcaaggccaagcat
gacggcattctagaaacagactacgacaagaagcacgatctggaccaggccctggtcaac
ctggtggtgaaggactcccagccctgctccatcgtggaggatcggggcttcagggacttt
gtgaagaagctggacccgtcctacgcgctgccgagcaaacaggctctgaagaagatggtg
gacgaccgctaccaggaggagaaggccgacgcccaggcgcagctgcgggaggcggaggcc
gtcagcctgacggtggacctgtggacgtccgcggacacgcgcctggcggtggcgtgtcac
tacgtgctggaaaactccaagttggccacggtgctgctgggggttctgccgttcccccag
aaccacggtcccacggacgtggcggacgctcagaggaccctgatggcggagtggggcctt
gaggggaaggtaaagtgcctcgtgagcgacaccacgccggccatggtggccgccgcggac
gatttggccctaccgcacgttgagtgcatcgcccacgccctgaacggcgtggtccggagg
gctctggacaaaaccgcaggtctgaaaggtctgcgcaggcgggcgggcgaggtggtggcg
ctcttcaggtccagcgccgccgccaaggagaagctgaggagcaagcagcagaagctggcg
ctcccggtgaccaagctggtgcgggaggagagctcgcgctggaccagcaccttcctgatg
ctgcagagcctgctggacgcgcggcgggccgtgggctccgccctgacggcgctcggggcc
aaggtggagcctctgtcctgcgacgagagcgagacctcggcggcctgcctgcaggtgctg
aagccgttctacacggcgactgtggagatgtcggagcagaagcgggtgttggggtccatg
gggatcccactggtcaagatgctgctcctcgccaccgaggaggtggcggaggagtcggac
aacgtgacggcggagctgctgggccagaacctgtccgcgggcctcaggagggagttcgac
ggcctggaggagaaccccgtcctgtcgctggccacgctgctcgacccccggttcaaaacc
atcggcttccgctgccaagagaaggcccagcaggccgtgcaaacgctgaccgccgagtgt
gccgcgctggtgaggcccgcggcggacagacccactgagcgtccggctcagcagacctcc
acagctttcaacctctggaagagtctggacgaccaggcctccatggtgagaacccacagc
aacgccaccgcggacgccacgttggaggtccagcgctacatgacggatcctcccctggag
cggtcgcaggatcctctggtctactggaaggagcacaaaaacatttacccgcacctgttc
tccctggccaagaagcacctgtgcatcccggcgtcctccgtgcccttcgagcgcgtcttc
tccaaagccggagacgttttcagccggaagcggaaccggctcagtccaaaggcggcggag
aaaatcctgcttctcaacaagaacatctga
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