Oryzias latipes (Japanese medaka): 101158561
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Entry
101158561 CDS
T02443
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101158561 (zeb1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
101158561 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-met
zf-H2C2_5
zf-C2H2_6
zf-C2HC_2
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
101158561
NCBI-ProteinID:
XP_004080948
UniProt:
H2LHC4
LinkDB
All DBs
Position
20:7198906..7247167
Genome browser
AA seq
1034 aa
AA seq
DB search
MADGPRCKRRKQANPRRTSVSNYNNVVEAGSDSDDEDKLHIVEEDGADCDGTLQDDEHQG
VLQWDPVKEDCPSNGEDDVSTDALVEKMLQQGDTAVIYPEAPDDEPPRQGTPDTGVHDEN
GTPDSFSQLLTCPYCSRGYKRYSSLKEHIKYRHEKTDESFSCPECSYSFAYRAQLERHMT
VHRNGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSHS
GSYSSHISSKKCISIISMNGRQRVGGAKTQGPSPTLSTSPSALCTQIREKLEHTKPLQEQ
LPLNQIKTEPVDYEYKPALGTPPNMTAMSGGGVFAGGAAAPLQGTVQAVVLPTMGLVSPI
SINLADLQNALKVAVDGSVIRQVLENKVQASAGLTTGTLHPPQQQLISAISLPIVGQDGN
AKIIINYSLDPSQGQLTAHNLKKEREETLSPYLQKLPEDLTVRGPKPPEIKEEKTTKNCL
LCENCPGGLEALHALKHCKKDVLRLNGAGRDRSESAIAALLSEGGFCHPSKNILSLLKAY
FALNAEPTKDELAKISDSVSLPVHVVKKWFDKMQEGQISLGAPTPPSEEEDTCEAHSVVS
LIPGGDAATKSPSVSRDSPTEATPAEVNGTHSFPASPTPLNLTAGGPVQAVTPQSTEGPL
DLSLPKPAREEAERVAVKAPVFLSASSGSPKQEQPLNLTCTKNNASPLSSTWGSPAALHA
HQPSAKHLDIVTTMQCLRALATNNKQAILIPQLAYTYTTAASSPAGSETHDGVHINGIKE
EKPDLSSEANSMLEEQNDSDSGPARKKMKKTESGMYACDLCDKIFQKSSSLLRHKYEHTG
KRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKK
EAQSQAAGQESPEDGEALSRVQSELFPPSLLDLDERGSSTREEEESEEEEEGMVDMDEIQ
VVQIGEDEGDEEEERAELIKGGEEVTEKVEEQVKSREEEEEEEAPGSPEKDEAMETEENE
GETKDNKETKGDTD
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaccagcgtg
agtaactacaacaatgtggtggaggccggctcagactcagacgacgaggacaagctgcac
atcgtggaggaagacggcgccgactgtgacggcaccctgcaggacgatgaacaccaaggg
gtgctccagtgggacccagtgaaggaagactgtccctcaaacggcgaggatgacgtgagc
acagacgccctggtggagaagatgctccagcagggggacacggcagtcatctaccccgag
gcccccgacgacgagcctccacggcagggaacgccagacaccggcgtccacgatgagaac
gggactcctgactccttctcccagctgctcacctgtccctactgctcccgcggctacaag
cgctacagctccctgaaggagcacatcaagtatcggcacgagaagacggacgagagcttc
agctgcccggagtgcagctacagctttgcgtaccgcgctcagctggagaggcacatgacg
gtccacaggaatggaagggatcagaggcacatcacacagtctgggggcaatcgtaaattc
aagtgcaccgagtgtggcaaagcgtttaaatacaagcaccacctgaaggagcacctccgc
attcacagcggagagaaaccctacgagtgctccaactgtaagaagcgcttctcccactcc
ggctcatacagctcccacatcagcagtaagaagtgcatcagcatcatctcaatgaacggc
aggcagcgcgtggggggggctaaaacccagggcccctcaccgaccctgtccacttcaccc
tcggccctctgcacccagatcagggaaaagctggaacacaccaagccgctgcaggagcag
ctgcccctcaaccagatcaagactgagcctgtggactacgagtacaagccggccttgggg
acgccgcccaacatgactgccatgagcggcgggggggtgttcgccggcggtgccgcggct
cctctgcagggcacggtgcaggcggtggtcctgcccaccatggggctggtgtcacccatc
agcatcaacctggcagacctgcagaatgccctgaaggtggcggtggacggtagcgtcata
cgccaggtgctggaaaacaaagtgcaggcgagcgcggggttaaccactggaacactccac
cccccacagcaacagctcatctcagccatcagtctgcccatcgtcggccaggacggaaac
gccaaaatcattataaactatagcctggaccccagccagggccagctcactgcgcataac
ctgaagaaagagcgtgaggagacgctgtccccttatctccaaaagcttcctgaagacctc
accgtcagaggtcccaaaccccccgagatcaaagaggaaaagaccactaaaaactgtctc
ctgtgtgaaaactgtcctgggggcttggaggcgctccatgctctgaagcactgcaagaag
gacgtcctccggctaaacggagcgggccgggaccgatccgagtccgccatcgccgccttg
ctgtcagaaggggggttctgccacccatccaagaacatcctgtccctgctcaaggcctac
ttcgccttgaatgcggagcccaccaaggatgagctggccaagatctccgattctgtcagc
ctgccggtccacgtggtcaagaaatggtttgacaagatgcaggaggggcagatatccctg
ggcgctcccacgcctccctcagaggaggaggacacctgtgaggctcacagtgtggtgtcc
ctgatcccagggggggacgcagctactaaaagcccttctgtgagccgggacagccccact
gaagctaccccggctgaagtcaacggcactcacagtttcccggcctcccccacaccacta
aacctgacggcaggcggtcccgtccaagctgtcaccccacagagcactgagggacccctg
gacctgtctctgccaaagccggccagagaagaggcggagagagtggcggtgaaagccccc
gtcttcctctccgcctcctctggctcccccaaacaggagcagcccctgaacttaacttgc
acaaagaacaacgcatcgccactctcgtccacgtgggggagccccgccgcactgcacgcc
caccagccaagtgccaaacacctcgatattgtaaccacaatgcaatgcctcagagcgctc
gccaccaacaacaagcaggccatcctgatcccccagctggcctacacctacaccactgcg
gcgagcagccctgcaggcagcgagacgcacgacggcgtccatatcaacggaatcaaggag
gagaagccggacctgagctccgaggccaactccatgctggaggagcagaacgactcggac
tcgggccccgccaggaagaagatgaagaagacggagagcggcatgtacgcctgcgacctg
tgcgacaaaatcttccaaaagagcagctcgctgctgaggcacaaatacgaacacacaggg
aagcggcctcacgagtgcggcatctgcagcaaggccttcaaacacaaacaccacctgatc
gagcacatgcgcctccactccggagagaagccctatcagtgtgacaagtgcggcaagcgc
ttctcccactccggctcctactcgcagcacatgaaccaccgctactcttactgcaagaag
gaggcgcagagccaggccgcagggcaggagagccccgaggacggcgaggctctgagccgg
gtgcagagcgagctgttccccccctccctgctggacttggatgaaagagggagtagcacc
agagaggaggaggagagcgaagaggaggaggaaggcatggtggacatggatgagatccag
gttgtgcagataggagaagacgaaggagacgaggaggaggagagagcggagctgatcaag
ggcggagaggaggtcacagaaaaggtggaggagcaggtgaagtcaagggaggaggaggag
gaggaggaggcacctgggagccccgagaaagacgaggcgatggaaacagaggagaacgaa
ggggagacgaaggacaataaggagacgaaaggagacactgactga
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integrated database retrieval system
