Oryzias latipes (Japanese medaka): 101158614
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Entry
101158614 CDS
T02443
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101158614
03041 Spliceosome [BR:
ola03041
]
101158614
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101158614
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101158614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101158614
NCBI-ProteinID:
XP_004072806
UniProt:
A0A3P9J8X1
H2MLK2
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All DBs
Position
9:complement(25243172..25252485)
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AA seq
386 aa
AA seq
DB search
MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKT
TYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGY
SFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGKETPDMMNSMQQMSIPQQNKIGFPAAQ
PYGQWGQWYGNGPQISQYVPNGWQVPTYGVYSQGWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatcaacctagaaccttatacgtggggaatctgtccagggatgtcacagag
cctctcattctgcaggtctttacacagataggaccctgcaagagctgtaaaatgattgtt
gatacggcaggaaatgatccatactgttttgtggagttctatgaccacaggcatgctgct
gcttcactggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagttaactgg
gccacaacaccaaccagccagaaaaaagacacgagtaatcattttcatgttttcgttgga
gaccttagtccagaaatcaccacagaagatgttaaagctgcctttgccccatttggaagg
atatcagatgctcgtgttgttaaagatatggctacaggcaaatccaaaggctatggcttt
gtgtctttcttcaacaaatgggatgcagagaacgccattcagcacatgggaggccagtgg
ttaggtggcagacagattcgaactaactgggccacaagaaagccccctgccccaaagacc
acctatgaaagtaattccaagcacctgtcctttgaggaagtgatgagtcagtccagcccg
agtaactgtactgtgtactgtggtggagtcagctctggtctcacagagcaactgatgagg
cagaccttctctgctttcgggcaaatcatggaagtccgagtttttccagacaaaggttat
tcatttgtgaggttcaactcccacgagtcagcagcccatgccattgtgtcagtgaatggc
acttcaatagacggtcatgtagtaaaatgctactggggtaaggagactccggacatgatg
aactccatgcagcagatgtccattcctcagcagaataagatcggcttccctgcagcccag
ccctatggacagtggggccagtggtacggcaatgggccccaaatcagccagtatgttccc
aatgggtggcaggtccccacctacggtgtctatagccagggatggaaccagcagggcttc
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggtt
atggagcctacacagggactgaatgggagtatgctagccaaccagcctggcatgggagct
gcaggataccccacacactga
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