Oryzias latipes (Japanese medaka): 101158703
Help
Entry
101158703 CDS
T02443
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04137
Mitophagy - animal
ola04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
101158703
04137 Mitophagy - animal
101158703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101158703
Membrane trafficking [BR:
ola04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101158703
Protein recycling
Other Rab GTPase associated proteins
101158703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
CSN8_PSD8_EIF3K
SR_desmoplakin_3
Motif
Other DBs
NCBI-GeneID:
101158703
NCBI-ProteinID:
XP_023814181
UniProt:
H2LN06
LinkDB
All DBs
Position
9:complement(12053020..12057499)
Genome browser
AA seq
478 aa
AA seq
DB search
MWTEKQRGIHVTQEELLCKNACGFYGNPAWNGFCSKCWRDGSRSASTPRQDARPRDDGAS
PTFSKFEEKKNFEKSRRINTVRRLFWGSSSPPKPQESSESHTKMLQAYQSLEPGDFPGFL
KILRSPPSQRLQSRCTAFLNTMKAYHDLPVQKQSDLVQDFYQSFAEHFRSFPEAQVTEIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWITAQMLSVPFPNEKIPVTGDP
FLTAITAIIEMDAKRAPQDKLACVSKCCQHIFEALAVSSSEPANADDFLSGLVYVLLKAN
PPRLHSNMQYMIRFGLPHSLMAGETGYYFTNLSCAVAFIEKLDGPALNLSPEDFESYMRG
QRAPSIAAKRHHVARDTQSLLEELQGRHQKLHQGVDDLSVQLQNWVQDVHCQIDQATAQF
TKAQVEITAQAEVSQLASVSDQGQHSEGDDEDHSASVLQDHHGAPEDERLSYQNLHKN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagaaaagcaaagagggatccatgtgacccaggaggagcttctctgcaaaaac
gcctgtggtttctatggaaatcctgcatggaacggcttctgctccaagtgctggagagat
ggatctcgttctgccagcaccccgaggcaagacgctagaccaagagacgatggcgcatcc
ccgacattctctaaatttgaggagaagaagaactttgaaaaaagtcgtcgcataaacaca
gtgagaagactcttctggggcagttcgtctcctcccaaacctcaagagtcctcagaaagt
catacaaagatgttacaagcctaccagagccttgaacctggtgacttccctggtttccta
aagatcttgcgcagcccgccatcccagcgtctgcagtcccgctgcacagctttcctgaac
acaatgaaggcttaccatgatctgccggtacagaaacagtcggaccttgtgcaggacttc
taccaatcttttgctgagcactttagaagttttcctgaagctcaggtcactgagataatg
gagcatgtagagaagctgataatgacacgactgcacaaatgggtgttctgccatgacagc
tgtgacgatgaacagaaggacttggctctccaaagacggatacgctccttaaactggatc
acggcacaaatgttgagtgttccttttccaaatgagaagattccagtcacaggagacccc
ttcttgactgcaataacagccataattgaaatggatgccaaaagagccccgcaggacaaa
cttgcatgcgtatccaaatgctgtcagcacatctttgaggcgctcgctgtgtccagcagt
gagcccgctaatgctgatgacttcttgtccggcctggtctatgtgctgctcaaagccaat
ccgccccgcctgcactccaacatgcagtacatgattcgctttgggctccctcacagtctc
atggcaggagagaccggctactacttcaccaacctgtcatgtgcagtggccttcattgag
aagctggatggaccagctctcaacctgagccctgaagattttgaaagctacatgaggggt
cagcgtgcgccctccatagcagcaaagaggcatcacgttgccagagacacacagagtctg
ttggaagagctgcaaggcagacaccagaaacttcaccaaggagtagatgatctcagtgtg
cagctccagaactgggttcaagatgttcattgtcagattgaccaagcaaccgcccagttt
accaaagctcaggtggagataaccgcacaagctgaggtctcacagctggcttcagtatca
gatcagggtcaacacagcgaaggtgatgatgaagaccactcagcgtcggtgcttcaggat
catcatggagctccagaagatgaaagactgtcttaccagaacctccacaaaaactag
DBGET
integrated database retrieval system
