Oryzias latipes (Japanese medaka): 101158717
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Entry
101158717 CDS
T02443
Symbol
opn3
Name
(RefSeq) opsin-3
KO
K04256
c-opsin
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101158717 (opn3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ola04030
]
101158717 (opn3)
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101158717 (opn3)
G protein-coupled receptors [BR:
ola04030
]
Rhodopsin family
Vision
Opsin
101158717 (opn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
DUF5684
Motif
Other DBs
NCBI-GeneID:
101158717
NCBI-ProteinID:
NP_001292332
UniProt:
R9R6D3
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Position
15:complement(3393166..3407699)
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AA seq
391 aa
AA seq
DB search
MNPANESRAGRHEERSVFAVGTYKLLTVIIGTIGVFGFCNNLLVILLYCKFKRLRTPTSL
LLVNISLSDLLVSVVGINFTLASCVKGRWMWSQATCVWDGFSNSLFGIVSIMTLAALAYE
RYIRVVHAQVVDFPWAWRAIGHIWLYSLAWTGAPLLGWNRYTLEIHQLGCSLDWASKDPN
DAAFILLFLLGCFFVPVGIMIYCYGNILYAVRMLRSIEDLQTVQIIKILRYEKKVAAMFL
LMISCFLVCWTPYAVVSMMEAFGKKSMVSPTVAIVPSFFAKSSTAYNPLIYVFMNRKFRR
CFLQLLGSRLRSKISWLQCTLKEHPLTPVERPIRPIVASTSCGSRHRPKKRVTFNSSSIV
FMITGDEFQQLDVTSKSRNSSEANVFHVRPL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagcaaacgaaagcagagccggcagacacgaggagcggtccgtcttcgctgtc
ggtacctacaaacttctgacggtcatcatcggaaccatcggagtctttgggttctgcaac
aacctgcttgtgattctgctgtactgtaaattcaagcgcctccggacccccaccagcctg
ctgctggtcaacatcagcctcagcgaccttctggtttctgtcgtcgggatcaactttacg
ctggcttcgtgcgtcaaagggagatggatgtggagccaggcgacgtgcgtctgggacggg
ttcagcaacagcctgttcggcattgtttccatcatgactctagcagctctggcttatgag
cgctacatccgggtggtccacgcccaggtggtcgatttcccgtgggcgtggcgggccatc
ggccacatttggctgtactctctggcgtggacgggggctcctctgctgggctggaaccgc
tacactctggagatccaccagttgggctgctccctggactgggcatctaaagacccaaac
gatgctgccttcatcctcctcttcctccttggatgcttctttgtgcctgttggtatcatg
atttactgctacgggaacatcctctacgcagtgagaatgctacgctccattgaagacctc
cagacagttcagattatcaagatcttgcggtacgagaaaaaagtggctgcaatgtttctg
ctgatgatctcctgcttcctggtgtgctggaccccctacgctgttgtgtccatgatggaa
gcctttggcaagaagagcatggtgtctccaaccgtggccatcgtcccatccttctttgcc
aagtccagcacagcgtacaaccccctaatctatgtgttcatgaacagaaagttccggcgc
tgctttctgcagctgcttggctcacggctccgctcaaagatctcctggcttcagtgcacc
ctgaaagaacaccccctgactccagtggagcgcccaatccgaccgatcgttgcatccacg
tcatgtggcagccggcatcggcccaaaaagagagtcaccttcaattcctcctccattgtc
ttcatgatcactggggatgagttccagcagctagacgttacctccaaaagcaggaactcc
tcagaggccaacgtttttcacgtgaggccattgtga
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