Oryzias latipes (Japanese medaka): 101158724
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Entry
101158724 CDS
T02443
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101158724 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101158724 (gtf2b)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
101158724 (gtf2b)
Prokaryotic type
Archaeal type
TFB
101158724 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
101158724
NCBI-ProteinID:
XP_004078691
UniProt:
A0A3P9K2E5
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All DBs
Position
17:complement(5822785..5828761)
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AA seq
318 aa
AA seq
DB search
MASTSRGDALSLPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KAQKDPSRVGDAQNPLLNGGDLTTMIGKGTGSASFDEFGNSKYQNRRTMSSSDRAMLHAF
KEISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacaagtcgcggagatgctctcagtttacccagagtgacatgtcccaaccat
cctgatgccatcctggtggaggactaccgcgctggggacatgatttgccccgagtgtggg
cttgttgtaggtgaccgggtcattgatgtgggttcagagtggagaaccttctccaacgag
aaagctcagaaagatccatccagagtgggagacgcccagaaccctctgctcaacggagga
gatctaactaccatgatcggcaagggaaccgggtctgcaagctttgatgaatttgggaac
tccaagtatcagaaccggcggaccatgagcagctcggaccgggccatgctccacgccttc
aaagagatcagcaccatggccgaccgcatcaacctgccccggaacatcgtagacagaacc
aacaacttattcaagcaagtttatgagcagaagagcctgaagggccgagccaacgacgcc
atcgcatccgcctgcctttacatcgcctgcagacaggaaggagtccccagaaccttcaaa
gagatctgtgccgtctccagaatctccaagaaagagattggtcggtgcttcaagctgatc
ctgaaggctctggagaccagcgtggacctcatcaccacgggggacttcatgtcccggttc
tgctccaacctgggcctgcccaagcaggttcaaatggcggccacctttattgcgaggaag
gccgtggagctggacttggttccgggtcgaagccccatctccgtggcggcagcagccatc
tacatggcgtctcaggcgtctgcagagaagaagactcagaaagaaattggagacattgct
ggagtggcggacgtcaccatcaggcagtcctacaggctcatctacccccgcgctgctgaa
cttttccctcccgacttcaagtttgacacccccgtcgacaagcttccccagctgtga
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